Salvelinus sp. IW2-2015 (Arctic char): 111961300
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Entry
111961300 CDS
T05762
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111961300
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
111961300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
PMP1_2
CatAgl_D1
Motif
Other DBs
NCBI-GeneID:
111961300
NCBI-ProteinID:
XP_023839229
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All DBs
Position
LG4q.1:29:5619566..5817969
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AA seq
1325 aa
AA seq
DB search
MDLETRRHTGMLLQLAVLFCCSYGALGKDSCDGPLVSSLPQSSFRSSSQLSNSHGPGFAK
VNRRDGAGGWAPVESNKYQWLEVDLGERTEITAVATQGRYGSSDWVSSFLLMFSDTGRNW
KQYRQEDSIGAFTGNSNADSVVQFKLQQPVFARFLRLLPLDWNPNGRIGLRLEAYGCPYK
SDVASFDGSGCLLYRFSPNTTPILTAKDSISLKFKTLQNSGTLIHTEGQHDRSLTLELHK
GKLLLHLKGKSASPGPESHTVVSLGSLLDDLHWHHVAIERVRGHVNFTVDKSTQQIQVPA
ELSPFEINEITFGGVQCHGTQKVMSLRNFHGCLENLLWNEVNVNDLAKQHQEVSITGNVT
FTCAEPVSVPVTFAGAQSFLQLPGAALQQRDAGGGGVALVAVGVAISLQFRTWNRAGLLL
TFDLQQQVGSLWLYLSETRVRLQIHKAGRILLDVVTGFGLNDGQWHSVDLTARRGRLXIT
VDKEESSTAHASPSFPVVSGNNLFFGGCPDSKTNQECRNPFNVFQGCMRHIHVDNNAVDL
IKVQQMLIGNYSDLQIDMCGIIDRCSPSHCEHGGRCTQSWSTFHCNCSNTGYSGATCHSS
VYEQSCEVYKHKGNTTGLYYIDVDGSGLIKPQLIYCNMTDKTWMVIQHNNTELTKLKASS
GINQHLAYFNYSADAEQLGAIITQAEHCEQEVFYHCRKSRLLNTPDGSPFTWWVGRTDEP
QTYWGGAVPGSQQCGCGLQGNCIDSDHYCNCDADRKEWAADSGLLIHKENLPVRWVVVGD
IQRPESEAAYRVSPLRCHGDKNFWNAAFFNKETSYLHFPTFHGELSADISFLFKTTASSG
VFLENLGIKDFIRVELSSSMEVVFSFDVGNGPFEVRVETGGMALNDDRWHRVRAERNVKE
ASLCVDAFPCATQKAPADGHIHLQLNSQLFVGGTASRMKGFLGCIRSLQLNGRTLDLEER
AKITPGVSPGCPGHCGSYGHLCQNQARCVERYNGFSCDCGLSAYAGPFCQREVSAYFKPG
TSVQYTFKEPYELTRNASTQSQSSSIYSDLTLRGENVSFSFRTTQSPALLLYICSYYREY
LAVLLNRNGYLDVKYKLQNSRDAEVFRTSIRNLANGQLHRVSIRRISETVSVQIDQHRRE
DFNLTSDTEFNAIKSVVLGKVQESGELDPEIARLNSLGFSGCLSVVQFNSITPLKAALLY
PNTSPVIVTGPLAESTCGSSSPANPYPAETTHXLSDHSGTVGTGEPIVNAIKSDSALIGG
VIAVVIFVILSALAIMVRFLYRRKETFHSQEPKSIKPEADSPEYPFHSEPTSQNVLSENQ
KEYFI
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggatttggagaccagaagacacactggaatgcttttacagctagcagtccttttctgc
tgttcatatggggcacttggaaaagacagctgtgatggcccactggtgtccagcctgccc
cagtcctccttcagaagctcatcacagttatccaacagccatggacccggctttgccaaa
gtcaacaggagagatggtgccggaggctgggctcctgtagagtctaataagtaccagtgg
ttggaggtggacctgggggagcggacagaaatcacagccgtggccacgcagggtcgctac
ggcagctcagactgggtctcctccttcctcctcatgttcagcgacacgggacgcaactgg
aaacagtaccgccaggaggacagcatcggggcgttcactggaaacagcaatgcagacagt
gtggtgcagttcaaactgcagcagccagtctttgccaggttcctacggttacttcctctc
gactggaaccctaacgggaggataggcctgaggctggaggcctatggatgcccttacaag
tctgatgtggcaagtttcgacggcagcggctgcctgctctacaggttcagccccaacaca
acaccaattctaacggccaaagacagcatctctctgaagttcaaaaccctgcagaactct
gggacactgatacacacagagggacaacacgatcgcagcctcacgctggagttacacaaa
ggaaaacttttactccaccttaaaggtaaaagtgcctctcctggtcctgagagccacacg
gtcgtgtcactgggtagtcttctagatgacctgcactggcaccatgtagccatcgagcgc
gttagaggccatgtcaacttcactgtggataaaagcactcagcagatccaggtccctgca
gaactcagtccttttgagataaacgagataacctttggcggcgtccagtgccatggaaca
cagaaggttatgtccctaaggaacttccatgggtgtcttgagaaccttctctggaatgag
gtgaacgtgaatgatctggccaagcagcaccaggaggtctccatcacgggcaatgtgacc
tttacttgtgctgagccggtctccgtcccagtgacgttcgcaggcgcccagagtttcctc
cagttgccgggtgcagctctacagcagagagacgccggtggcggcggggttgccttggtg
gcggttggtgtggcgatcagcctgcagttccggacctggaacagagcgggccttctgtta
acctttgacctccagcagcaggtggggagcctgtggctctacctgagcgagaccagagtc
aggctgcagatacacaaggctggcaggatcctactggacgttgtcacagggttcggtctg
aacgacggccagtggcattcagtagacctgactgcaagaagaggtcgtctgrccatcact
gtggataaagaggaaagctccacggctcatgccagcccatcttttcccgtggtatcagga
aacaacctcttctttggaggttgcccggatagcaagactaaccaggagtgcagaaaccct
ttcaacgtgttccaaggctgtatgagacacatccatgtggataataatgctgtggacctg
atcaaggtgcaacagatgctgataggaaactacagcgacctgcagattgacatgtgtgga
atcatcgacagatgctctccaagccattgtgaacacggtgggagatgcactcagtcttgg
agtaccttccattgcaattgctctaacacaggctacagtggagcaacgtgtcacagctcc
gtctatgagcagtcatgtgaagtgtacaaacacaagggcaacacaacagggctatattac
atagacgtggatggaagcggcctgatcaagccacagctgatttattgcaacatgactgat
aaaacatggatggtgatccaacacaataacacggagctaaccaaattaaaggcctcctct
gggataaatcagcatttagcctattttaactattcggccgatgcggaacagctcggggcc
ataattacccaggcagagcactgcgagcaggaagtcttctaccactgtagaaagtcacgc
ctcttaaacacaccagatggatctccgttcacttggtgggtgggacgtacagacgagccc
caaacgtactggggcggggcggtaccagggagccagcagtgtggctgcggtcttcagggt
aactgcatcgactcagaccactactgcaattgtgacgctgaccgcaaagaatgggctgct
gactctggcctgctcatccataaggagaatctaccagtcagatgggtggtggtgggggat
atacagagacctgaatcagaggcagcctatagagtcagcccacttagatgtcatggcgac
aagaacttctggaacgcagcgttcttcaacaaagagacgtcgtacctgcacttccccacg
ttccacggagagctgagtgcagacatctccttcctgttcaaaaccaccgcctcttcaggg
gtcttcctggaaaacctgggcattaaagacttcatacgggttgaactcagctcttcgatg
gaggtcgtcttctcgtttgacgtgggcaatggcccctttgaggtgcgtgtggagacgggc
ggcatggcgctaaacgacgacaggtggcaccgcgttcgagcggagcggaacgtgaaagag
gcttcactgtgtgtggacgctttcccgtgcgccacacagaaggcccccgccgacggtcac
atccatctgcaactcaacagccaattatttgtaggtggcactgcttccagaatgaaaggt
ttcctggggtgtatccgctcgctgcaactaaacgggaggactctggacctggaggagagg
gctaagatcacgcccggggtgagtccgggctgcccgggacactgcggcagctacgggcat
ctgtgccagaaccaggcgaggtgtgtggagaggtacaatggcttctcctgcgactgtggc
ctctccgcctacgcaggccccttctgccagagagaggtctctgcttacttcaaacctggg
acatcagtccagtacacattcaaggagccgtacgagctgactagaaacgccagcactcag
tcccagtcctcctccatctactctgacctgacgctacgaggagagaatgtctcgtttagc
tttagaaccacacagagccctgcgttactgctctacatctgctcctactacagagagtac
ctggctgtgctgctcaacaggaatggttacctggatgttaaatataagctgcagaacagt
agagatgctgaggtattcaggaccagcataaggaacttggccaatggacaacttcacaga
gtctccatcaggaggatatcagagactgtcagtgttcagattgaccagcacagaagggaa
gacttcaatctcacatctgatacagaattcaatgctatcaagtcagtwgtccttgggaag
gtgcaagagtctggtgagctggatccggagattgccaggctgaactccctgggtttcagt
ggctgtctgtcggtggtccagtttaactccatcactccactgaaggcagcgctactctac
ccaaacaccagcccagtcatagtgacaggacccctagctgagtccacctgtggttcctca
tctccagccaatccctacccagccgaaaccacacacmccctatcagatcattcaggtaca
gtaggtactggtgagcctatagttaatgcaatcaagagtgactctgcattgattggaggt
gtgattgctgtggtgatatttgtgattctgtctgcgttggcaataatggtaaggttcctg
tatcgacggaaagagacgttccacagccaagaaccaaaaagcatcaaacctgaggcagac
agtcctgagtaccctttccacagcgagcccacctcacagaacgtactaagtgaaaaccaa
aaggagtatttcatatag
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