KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111961340
Entry
111961340         CDS       T05762                                 
Name
(RefSeq) protein transport protein Sec31A isoform X1
  KO
K14005  protein transport protein SEC31
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111961340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:salp04131]
    111961340
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:salp02044]
    111961340
Membrane trafficking [BR:salp04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    111961340
Secretion system [BR:salp02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   111961340
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd WD40 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_DCAF12 Beta-prop_HPS5 TPR_Sec16 WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N WD40_RFWD3 Prp18 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 111961340
NCBI-ProteinID: XP_023839291
LinkDB
Position
LG4q.1:29:7546305..7573200
AA seq 1605 aa
MKLKEINRTAVQSWSPAQHHPVYLAAGTSAQQLDASFSTSASLEIFELDLAEPSLDMKLR
GAYSSSHRYHKLAWGPHGMDAQGLPSGVLIAGGENGDVILYDPAKIIAGDSDVVIAQSNK
HSGPVRALDVNSFQTNLVASGGNESEIYIWDLNNFGSPMTPGPKTQPLEDISCVAWNRQV
QHILASASPSGRASIWDLRKNDLIIKVSDHSNRMHCSGLEWNPEVATQLVLASEDDRMPV
IQIWDLRFATSPLKVLENHTRGILAIAWSLADPELLLSCGKDNRILCWNPNTAEVLYELP
TSTQWCFDIQWCPRNPAVLSAAAFDGHISVYSIMGGSSQAVSQTQADTISTSFGNMDPFG
MGQTLPPLQLSQAPPASTTITPLKKPPKWIRRPVGASFAFGGKLVSLENIKPNPQQPQQP
TAHVVYISQVITETTFLERSAHLQATLAAGSFIDFCQEKMDSAQNEFEKTVWAFLKVNFE
NDARGKYLKLLGYKKEELAAKIAAALEGEPIQPEEPVPAPAPTSDPGPEPGVVPIPAPQL
NTEPEVLPPVPEAAAVEPTPEPPLEPALQPEPGPQPELAPPPSGDLSASDPMPVLQSEPV
LTLDLSAEPQFLAPAAPVALLPESDPTLAPPALAPPADLQQAPMFDPTASFTLQPPTEFN
QVNSLPVSEFDQVDLQAVSDLTNLQPVPGFDPTSTIPSLQSAVQLDLAPPVPTLQPLADP
GLPPEDPFDLIAAASLQPAAELELTPAPEPEAEDPFDLIAAANLQPAAELELTPAPEPEA
EDPFDLIAAANLQPAAELELTPAPEPEAEDPFDLIAAANLQXAAELELTPAPEPEAEDPF
DLIAAANLQSAAELEVTGALEPLAAEVDLTEALGAETITQEEMPVNEEIPLEEEAAPPVE
ASLPGETPAPVPEGIKLRVSQGVDGLITQALLTGDFQGAVDLCLHDNRMADSIILAIAGG
AELLEKTQRKYFTKTHSKITKLISAVVMGDWRDVLQTCELQNWKEALAAVMTYAQPEEFS
SLCDLLGCRLEAVEDSTLQAQACLCYICAGNVEKLVSCWTRAQDGHCPLSLQDLVEKVVV
LRKAVEQNQESGPSAVGLLLGERMSQYASLLASQGSLTNAIAYLPQNTEQVEVQQLRDRL
SRALGQQAPAAAPVPQLPSPQPTAAQPRQLFTPAQPSMVSQQPAPAPVPAAASAPQQYYQ
PVRSASTVTSWSNQTPTALPSVPPPHLGPATTEPQVQPSPPMYGMPPSGSAAPPASSSAA
YPPMYSHQYQPYPPASQYNRGTGGPAIYSPLQYSAPPPPSFSSSSPQAPAPGFMPQYTQQ
PLYPPPSMGQPVSSAPPFSPPPLSSGASFQHGGPGSPASYMPPLPPTGSSEGYNPDTTCF
MEGEGPQNGWNDPPTLNRVPKKKKVPENYTPPSPITAPIFSPLGAGDPQQPPYMPPGQAQ
NQAPYQGMQQQTAPPPMNPGMLKTRGGSVEGAPGAPTGDIIQPLQSIPAEKITMKPMPDE
HLVLKNTFEGLIHKCLAAATDPQTKRKLDDANKRLEALYDKLREQTLSPAIIGGLHNMVQ
CIESRSYVESLNIHTHIVSSSNFSETSAFMPVLKVVLTQANKLGV
NT seq 4818 nt   +upstreamnt  +downstreamnt
atgaagctcaaagagatcaaccgcacggccgtccagagctggagcccagcacagcaccat
cctgtgtacctggcagcaggtacgtcagcccagcagctggatgcctcctttagtacctct
gcctctctggagatctttgagctggacctggccgagccttctctggacatgaagctccgg
ggagcttactcctcctctcacagataccacaagctggcgtggggtccccacggcatggat
gcacagggtctcccgtctggagtgctcatcgcagggggagagaacggcgacgtcattctt
tacgacccggccaaaatcattgctggagacagtgacgttgtcatcgctcagagtaacaaa
cacagcgggccagtcagagcccttgatgtcaactccttccagaccaacctggtggcttca
ggaggtaatgaatcagagatctacatctgggacctaaacaactttggctccccgatgaca
ccgggtcctaaaactcagcctctagaggacatcagctgtgtggcgtggaacaggcaggtc
caacacatcctggcctcggccagccccagcggccgagcctccatctgggacctccgcaag
aacgacctaatcatcaaagtcagcgaccacagcaacaggatgcattgctctgggctagag
tggaaccctgaggtggctactcagctggtgctggcctcggaggatgaccggatgccagtg
atccagatctgggacctgcgttttgccacctcccctctcaaagtcctggagaaccacaca
cggggtatcctggccatcgcttggagcctggcggaccctgagctgctactgagctgcggg
aaagacaacagaatcctctgctggaaccccaacaccgccgaggtgctgtatgagctgcct
accagcacccagtggtgctttgacatccagtggtgtcccaggaacccagcggtgctgtcg
gctgcagccttcgacggacacatcagcgtctactccatcatggggggcagcagccaggct
gtcagccagacacaggcagacacgatcagcacgtcatttggcaatatggatccatttggg
atgggacagaccctgccccccctgcagctttcccaggccccgcccgcctccaccaccatc
acccccctgaaaaagccccccaagtggatccgcaggcccgtgggggcctccttcgctttt
ggtggtaagctggtgtcgttggagaacatcaagcccaacccccagcagcctcagcagcct
acggcccatgtggtttacattagtcaggtgattacggagacgaccttcctggagcgctct
gcccacctgcaggccacactggctgcaggcagcttcattgacttctgccaggagaagatg
gactctgcccagaacgagtttgagaagaccgtctgggccttcctgaaggtgaacttcgag
aatgacgctcgcggaaaatacctgaagcttttgggatacaagaaggaggagctagcagca
aagattgcagcagcattagagggagaacctattcagcccgaggagcccgtccctgctcct
gcccccacctctgatcctggaccagaaccaggggtagtgcccattcccgctccccagctc
aacacggagcctgaggtccttcctcccgtgcctgaggctgctgctgttgagcccaccccc
gaaccgccgcttgagcccgccctccagcccgaacccggaccccagccagagcttgccccc
ccacccagcggtgacctttcagcttctgatcctatgcctgtcctccaatcggagcctgtc
cttactcttgacctcagcgcagaaccccagtttcttgcccctgctgctcccgttgctctc
ctgccagagtctgaccctactctggcccccccagctctggcccccccagctgacctgcag
caagcacccatgtttgatcccactgcctcctttaccctccagcctccaacagagttcaac
caagtgaactcactgcctgtatctgaatttgaccaggtggacttacaggctgtatccgac
ctcaccaacctgcagccagtgcccggcttcgacccgacgtcaacaattcccagtctgcag
tcggcagtccagctggacctggctcctcctgtccccaccttgcagcctctagcagaccct
ggactcccgcctgaagatccatttgacctcatcgctgctgcaagtctccagccagcagcg
gaattggaactcacacctgctccggaaccagaagcggaagatccatttgacctcatcgct
gctgcaaatctccagccagcagcggaattggaactcacacctgctccggaaccagaagcg
gaagatccatttgacctcatcgctgctgcaaatctccagccagcagcggaattggaactc
acacctgctccggaaccagaagcggaagatccatttgacctcatcgctgctgcaaatctc
cagycagcagcggaattggaactcacacctgctccggaaccagaagcggaagatccattt
gacctcatcgctgctgcaaatctccagtcagcagcggaattggaagtgacaggagctctg
gaaccattggcagcagaagtagacctgacagaggcccttggagctgagaccatcacccag
gaagagatgccagtaaatgaagagattcctctggaggaggaggcggctccaccagtagag
gccagcctgccaggggagaccccagctccagtcccagagggcattaaactccgcgtcagt
caaggcgtggatggcctgatcacccaggccctgctgacgggggacttccagggcgcagtg
gacctctgtctccatgacaaccgcatggctgacagcatcatcctggccatcgccggaggg
gcggagcttctggagaaaacacagaggaagtacttcaccaagactcacagcaagatcacc
aagctgatcagtgcggtggtgatgggggactggcgtgacgtgctgcagacctgtgagctg
cagaactggaaggaggctctggctgcagtcatgacctacgctcagcccgaggagttctcc
tctctgtgtgacctgctgggctgcagactggaggctgtggaggacagcacgctgcaggct
caggcttgtctgtgttacatctgcgctggcaacgtggagaaactggtgtcctgctggacc
agagcacaggacggacactgccctctctctctgcaggacctggtcgagaaggtggtggtg
ctccgcaaggcggtagagcagaaccaggagtctggtccctctgctgtggggcttctactg
ggagagaggatgagtcagtatgccagcctgctggcctcccagggcagccttaccaacgcc
atcgcatacctgccccagaacacagagcaggttgaggtgcagcagctgcgtgaccgtctc
agcagagctctgggtcaacaggctcctgctgcagccccggtaccccaactcccatcccct
cagcccacagctgcccagcccaggcagctcttcacccctgcccagccttctatggtgtcc
cagcagcccgctccagcccctgtgcctgccgccgccagcgcaccgcaacagtattaccag
ccggtaaggtctgcctctacagttacctcctggagtaaccaaactcccacagctctcccc
agtgtccctcctcctcatctaggccctgccaccacagagccccaggttcagccgtcaccc
cccatgtatgggatgcctccctctgggtcagctgctcccccagcctcctcgtctgctgcg
tacccccccatgtactcacatcagtaccagccctaccctccggccagccagtacaaccgt
ggcactggtggcccagctatctattcgcctctccagtactctgctcctcctcctccttcc
ttctcttcctcctcaccccaagccccagctccaggcttcatgccccaatacacccaacaa
cccctctacccacctccttccatgggccagcctgtgtcctccgctcctcctttctctcct
cctccgctgtcatctggagcgtctttccaacatggcggaccggggtcgcccgcctcgtac
atgccgccgctcccaccaaccggatcctcagagggatataatccagacactacctgtttc
atggaaggtgaaggccctcagaatggctggaacgacccgcctaccctgaacagagtgcca
aagaagaagaaggttccagagaactacacgcctccttcccccatcacggcccccatcttt
tctcccctcggtgccggggacccccagcagcccccttacatgcctccaggccaggcccag
aaccaggccccctaccagggcatgcagcagcagacggcccctccacccatgaaccctggc
atgctcaagacacgtggaggaagtgtggagggagcgcccggagccccgacgggagatatc
atacagccgctgcagtccatccctgctgagaagatcaccatgaagcccatgcctgatgag
catctggtcctgaaaaacacctttgagggcctcatccacaagtgcttggctgctgccacc
gatcctcaaaccaagaggaagctggatgacgccaacaaacgccttgaggccctctacgac
aagctacgagagcagaccctctccccagccatcataggcggcctgcacaacatggtgcag
tgcatcgagtctcgatcctacgtggagagcctcaacatccacacacacatagtgagcagc
agcaacttcagcgagacgtctgccttcatgcctgtgctcaaggtggtgctgacacaagcc
aacaaactgggggtctga

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