Salvelinus sp. IW2-2015 (Arctic char): 111961417
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Entry
111961417 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vb-like
KO
K10357
myosin V
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111961417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111961417
04131 Membrane trafficking [BR:
salp04131
]
111961417
03029 Mitochondrial biogenesis [BR:
salp03029
]
111961417
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111961417
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
111961417
mRNA cycle factors
P-body specific factors
111961417
Membrane trafficking [BR:
salp04131
]
Others
Actin-binding proteins
Myosins
111961417
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
111961417
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
111961417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
AAA_22
Myosin_N
Ac76
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
111961417
NCBI-ProteinID:
XP_023839429
LinkDB
All DBs
Position
LG4q.1:29:complement(10437585..10519686)
Genome browser
AA seq
1849 aa
AA seq
DB search
MSVNELYSKYTRVWIPDPEDVWRAAEIIKDYKEGEPILHLKLEDESPLEYRIGPKDNPLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLEPNHIYTYCGIVLVAINPYDQLQIYG
EEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRRYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASASFPEFKDLALTSAEDFIFTSQGENIFIEGVN
DAEDFKKTKEAFTLLGVKESNQSSIFRIIASILHLGNVEICSERDGDSCHISRNDPHLTH
FCRLLGVELEQMEHWLCHRKLVTTSETYVKNMSRKQAANARDALAKHIYAHMFDWIVXHV
NKSLHTSSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNQHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWCQKLYDRLSSSVHFQK
PRMSNISFIIIHFADKVEYQCDGFLEKNRDTVYEEHINILKASKFQLVADLFQDTNKDGS
SSTSSSKSSRINVRSAKPTPKVPNKEHRKTVGHQFRSSLQLLMETLNATTPHYVRCIKPN
DEKEAFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLMKKSDMTVGDK
KLVCRNLLETLVKDPDKFQFGKTKIFFRAGQVAYLEKLRADKFRSACIKIQKTVRRWLQM
ARYKKIRKSAITLQRFGRGYMARRYAERLRLSRAAVICQKQYRMVRERRGYLRVRQAVVT
IQAFTRGMFTRRIFQEFLLHHKAMIIQKHVRGWLTRRKFKVARNAAITIQCAYRRMRAKR
ELKQLKIEARSAQHLKKLNTGMENKIVQLQRKMDDQTKDLKTQNEQLVVAKASLGSEVNK
LQKELETMRSRQGDGGQLTSLKDELEKLRAELLEAHAHRKKLEEEHSNEKMRFEQRVEEL
ERENSLLKSEKEKMNQRILHHSKSTEDQESSASQSVGRVQAELDEERQRYQNLLREFSRL
EQRYDNLQEAKFQPGHRRNNSNQSSLESDSNYPSISTSEVGDTDDAIQLVEEMGVEKAAM
DIGVFMKLQKRVRELEQERKRLQVNLEKMEDQSKRKGIEPKMTSEQENADLAYNSLKRQE
LESENKKLKNDLNELRKAIADRASKNSSSNELQDGYNLLLGQLKAANEELDVRKDEVLIL
RSQIVTAAQQKEKETTNHIETNNLPEWTNSKKPIDKEEAXEAYHGLCESKNKASDWGYLN
EDGELGLAYQGLKQVARLLEAQLQSQARKHEDELEAFHTQVELLKDDIEKKQEMLNHTMS
LSPEAQVEYSVQQEITRLTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVQELEVSVTAA
ASQSTTAKPEMTRQVTVQRREKDFEGMLEYYKEDEALLVKTLITDMKPHAVSATVPCLPA
YILFMCIRHADYINDDQKVHSLLTSTINAIKKVLKKNNDDFEMTSFWLANTSRLLHCLKQ
YSGDEAFMTQNTAKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLVKVAEHVMQPMIVSAML
ESESIPSLAGVKPMGYRNRSSSMDKDEEGPGSYTLEALIRQLGQFHVVMGEHGLDPEIAG
QVVRQLFYSINAVTLNNLLLRKDVCSWSTGMQLRYNISQMEEWLRGKNLHQSGAAVNMEP
VIQAAQLLQVKKKTSQDAEAICSLCTALTMQQIVKILNLYTPLNEFEERVTVSFIRNIQN
RLQERNDVPMLLVDTKHTFPVLFPYTPSALSLETLHIPANLSLHFLTRV
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgtcsgtaaacgagttatattcaaagtacactcgggtgtggatcccagacccagaggat
gtatggagagctgcagagatcatcaaggactacaaggagggagagccaatcctgcacctc
aaacttgaagatgaatcgccgttggaataccgcatcggacccaaagacaaccctcttccc
ttcctccggaaccctgatatcctggtgggggagaatgacctcacagcgctcagctacctg
cacgagcctgctgtcctgcacaacctcaaagtgcgcttcctcgagcccaaccacatctac
acatactgtggtatcgtactggtggccatcaacccctacgaccagcttcaaatctatgga
gaggaggtcatcaatgcctacagtgggcagaacatgggagacatggacccacacatcttt
gctgttgctgaggaggcatacaagcagatggccagagatgagaggaaccaatccatcata
gtaagtggggagtcgggggcagggaagaccgtctctgctaagtacgccatgcggttcttc
gccactgtgggagggtcggccaacgacaccaacgttgaggagaaggtgctggcctccagc
cccatcatggaggctattggaaatgcgaaaaccacgcgcaatgacaacagcagtcgtttt
gggaagtacatccagattggttttgacaggcgttatcacataataggtgccaacatgcgc
acgtatctgctggagaagtcaagggtggtgttccaggctgaggatgagaggaattaccac
atcttctaccagttgtgtgcctctgctagcttcccggagttcaaagacctagccttgacc
agtgcggaagacttcatcttcacatcgcaaggagagaacatcttcattgagggggtgaat
gatgccgaggacttcaagaagacgaaggaagcctttacgctactgggtgttaaggagagc
aatcaaagcagcatcttcagaatcatagcttccatcctgcatctggggaacgtggagatc
tgctcggagagagacggagactcctgccacatatcaaggaacgaccctcacttgacgcac
ttttgccggttgctgggggtggagctggagcagatggaacactggctatgtcacaggaag
ctggtcaccacgtcagagacctacgtcaagaacatgtcccgcaaacaggcggctaatgcc
cgcgacgcgctcgccaaacacatctacgcacacatgtttgactggattgtggwgcacgtc
aacaagtctctgcacacctcctccaaacaacactccttcatcggtgttctggatatctat
ggatttgagacctttgagataaacagcttcgagcagttctgcatcaactacgccaatgag
aaactgcagcagcagttcaatcaacatgtgttcaagctggagcaggaggagtacatgaag
gagcagatcccctggacgctcatcgacttctatgacaaccagccgtgtatcgacctcatc
gaggccaagttgggyatcctggacctgctggatgaggagtgcaaggtgcccaaagggaca
gatcagaactggtgccagaagctgtacgatcgcctttcaagcagcgtccatttccagaaa
ccacggatgtccaacatatctttcattatcattcactttgctgataaggttgagtaccag
tgtgatggcttcctggagaagaacagagacaccgtctacgaggaacacatcaacattctg
aaggccagcaagtttcagctcgtggcggatctgttccaggacactaataaagacggaagc
agctccacgtcttccagcaagtcctccaggatcaacgtgcgctcggccaaaccaactcct
aaagtccccaacaaggagcacaggaaaaccgtgggccaccagttccgcagctccctgcag
cttctcatggagaccctgaatgccaccaccccccactatgtgcgttgcatcaagcctaat
gacgagaaggaggcattctcgtttgactctaggagagctgtgcagcaactgagggcatgt
ggagtcctggagaccatccgcatcagtgctgctggctacccatcaaggtggacgtaccca
gacttcttcaacagatacagagtcctcatgaagaagtcagatatgaccgtaggagacaag
aaactggtgtgtaggaacctactagagaccctggtcaaggacccagacaagttccagttt
ggtaagaccaagatcttcttccgggcgggccaagtggcctacctggagaagctgagggca
gacaagttccgctccgcctgcatcaagatccagaagacagtgcgacgctggctacagatg
gcccgctacaagaagatacgcaagtctgccatcaccttgcagagatttggccgtggttac
atggcccgcaggtatgcggagcggctgcgcctaagccgcgctgctgttatctgtcagaag
cagtatcgtatggtccgagagcggaggggctatctgagggtgagacaggctgttgtcacc
atccaggcctttaccaggggcatgttcacccgcaggatcttccaggagttccttctgcat
cacaaagcgatgatcatccagaagcatgtccgaggctggcttactaggaggaagttcaag
gtggcacggaacgccgccatcaccatccagtgtgcctaccgccgcatgcgagccaagcgg
gagctgaaacagctgaagattgaggcgaggtccgctcaacatctgaagaagctcaacacg
ggcatggagaacaagatcgtccagctgcagaggaagatggatgaccagaccaaagatctg
aagactcagaatgagcagctggtggtggccaaagcctccctgggctcagaggtgaacaag
ctgcagaaggagctggagaccatgcgcagtcgccagggagacggcggtcagctgacctct
ctgaaggatgagctggagaagctgagggcggagctcctggaagcacatgcccacaggaag
aagctggaggaggagcacagcaacgagaagatgagatttgaacagagagtggaggagctg
gagagggagaattccctgctgaagagtgaaaaggagaagatgaaccaaaggattctgcac
cactccaagagcacagaagaccaggagagcagtgcatcccagagtgtgggtcgggtccag
gcagagctggatgaggagaggcagcgctaccagaacctgctcagggagttctccagactg
gagcagagatatgacaacctacaggaggccaagtttcagcctggccacaggaggaacaat
tctaaccagagcagcctggagtctgactccaattatccctccatttctacctcggaggtg
ggagacactgacgatgcyatccaactcgtagaggagatgggagtggagaaggcagcaatg
gacatcggtgtgttcatgaagctgcagaagcgtgttagggagctggaacaggagaggaag
agactgcaagtcaacctggaaaagatggaggaccagtctaagcgcaagggcattgagcca
aagatgacatcagagcaagagaatgcggatctggcctacaacagtctcaagagacaggag
ctggagtctgagaacaagaagctgaagaatgacctgaacgagctgaggaaggccatcgct
gaccgcgcctccaagaacagctcctccaatgagcttcaggacggctacaacctgctgctg
ggccagctcaaggcagccaatgaggagctggatgtgcgtaaggatgaggtccttatcctc
aggagtcagattgtcactgcagcccagcagaaagagaaggagacaaccaatcacattgaa
accaataacttgcctgaatggaccaacagcaagaagcccatagacaaggaggaggctnct
gaggcctatcatggactctgtgagtctaagaacaaagcttcggactggggttatttgaat
gaagatggcgagctgggcctggcataccagggtctaaaacaagtggccaggctgttggag
gcccagctccagtctcaggccaggaagcacgaggatgagctggaggcgttccacacccag
gtggagctgctaaaggacgacatagagaagaagcaggagatgctgaaccacaccatgtct
ctgtcccctgaggcccaggtggagtacagcgtccagcaggagatcacccggctcaccaac
gacaacctggacttaaaagagcttgtggagaaactggagaagaacgagaggaagctgaag
aagcagctgaggatctacatgaagaaagtacaggagctggaagtgtccgtgactgcagca
gcatcccagtccaccacggccaaaccagagatgacccgtcaggtgactgtccagcgcagg
gagaaggactttgagggcatgctggagtactacaaagaggacgaggccctgctggtcaaa
acgctcatcacagacatgaagccccacgctgtatcagcaacagtgccctgcctacctgcc
tacatcctcttcatgtgcatccgccatgcggactacatcaacgatgaccagaaggtccac
tctctgctcacctccaccatcaacgccattaagaaggtcctcaagaaaaacaatgatgac
tttgagatgacctccttctggctggccaacacgagtcgtctgctgcactgtctcaagcag
tacagtggagatgaggcgtttatgactcagaacacggccaagcagaatgagcactgtctg
aagaactttgacctggcagagtaccgccaggtgctgagtgacctctccatccagatctac
cagcagctcgtcaaggtggcagagcacgttatgcagcccatgatcgtgtcggccatgttg
gagagtgagtctatccccagccttgcgggagtgaagcccatgggttacaggaaccgctcc
tccagcatggacaaggacgaggagggcccagggagctacaccctggaggccctgatcaga
cagctgggccagttccacgtggtgatgggcgagcacggcctggacccagagatagcaggc
caggtggtccggcagctgttctacagcatcaacgctgtcaccctcaacaacctgctgctc
aggaaagacgtctgctcctggagcactggcatgcagctccggtacaacatcagtcagatg
gaggagtggcttcgggggaagaacctccaccagagtggggcggcggttaacatggagccc
gtcatccaggccgcccagctgcttcaggtcaagaagaagacgtcccaggacgccgaggcc
atctgctcactgtgtaccgctctcaccatgcaacagattgtgaaaatcctcaacctctac
accccgctcaacgagtttgaggaaagagtcactgtgtccttcatcagaaacatccagaat
cgtctgcaggagaggaacgatgtcccaatgctcctggtggacaccaagcacaccttccct
gtcctgttcccctataccccctcagccctcagcctggagacccttcacatccctgccaac
ctcagcctacacttcctcactcgagtctga
DBGET
integrated database retrieval system
