Salvelinus sp. IW2-2015 (Arctic char): 111961447
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Entry
111961447 CDS
T05762
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111961447
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111961447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
PSME4_C
Chromo_MIT1
MUN
Motif
Other DBs
NCBI-GeneID:
111961447
NCBI-ProteinID:
XP_023839494
LinkDB
All DBs
Position
LG1:12796581..12952590
Genome browser
AA seq
2687 aa
AA seq
DB search
MKHIFVEPNEDLFNPDYIEVDRVLEVAITTDTETGEEVTHYLVKWCSLSYEEATWELQED
VDPVKIREFEEIKRIPELKFVERPQPDKWGKLDKSKDYRNGNQLREYQLEGMNWLLFNWY
NRKNCILADEMGLGKTIQSITFLFEMFSMGLRGPFLIIAPLSTITNWEREFRTWTEINVI
VYHGSQISRQMIHQYEMYHKDQQGNIVSGGYKFHGVITTFEMIMADCPELKKIHWRCVVI
DEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPLQFPSESLFLE
EFGDLKTEEQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNMQKKYYRAILEK
NFTFLAKGANQHNMPNLINTMMELRKCCNHPYLIKGAEEKILDSFRKTHSPDAWDFNLQA
MIQAAGKLVLIDKLLPKLIAGGHKVLVFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNL
RQAAIDRFCKVDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG
QSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGQMTKIEVEDLLRKG
AYGALMDEEDEGSKFCEEDIDQILQRRTQTITIETEGKGSTFAKASFVSSGNRTDISLDD
PNFWQKWAKIAELEIDSKAEKESLVIDTPRVRKQTRHYNSFEDDELMEFSELDSDSEERP
CRTRRLSERNRHYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWQLAECDIEVLCRSLLV
YCVRHYKGDDKIKSFIWDLITPAKDGHKQDLQNHSAGLSAPVPRGRKGKKLKNQLSVPEM
KHADWLVNCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAAAQFLEGIPAS
KLEVALPDIDYIEIPAGWWDAEADKSLLIGVHKHGYERYNAMRADPELCFLERVGMPDVT
ALSAEQSGGEVMADLTDSNCKSDDVKDDPESKQEEGGVERVDNKDETSSSNDAMDKHDIV
VQDTGHRVQEGFGQEEFGQEGMELKGRPLWPAGPNLTARLRRLITAYQRFMRREPLRHDF
LLPGASPGPMSWQLGEELRHCTATAAKPDPLFLEWQRRWVMMSEQRWTRREQADFYRTVS
SFGVVYDPEKKTFDWSQFRSFARLERKTDESLERYFSSFVSMCRTACRLPPRKDEGPLDH
NLFVEPITEERAARTLYRIELLRKVREQVLRHLLLGPRLQLCRPSLYLPVWWECGKHDRD
LLIGAARHGLSRTDYYILNDPQLSFLEAHRNYVQKENHKGYHPGVHHAGMTPSPHHHPCC
LYETGLGQCHSPQPPEYHHPASSSSSIHAHSHPHIHVHGHPPEIVGTDPGGSLGMVSGPR
EGFLDCPPLDESLELASLQQEGLASDSLHCKSAKEAFNGFPFNSAQGGQSMLNSYGVQGE
LNGEQSAEMDPIISGKLRSDVLVGEQGSSEETGLMAPSLELDQELQAPWESTDHAGAADI
FNDADPILGAPALETEFLDPEEQPGDGGREDRAGGVLDDCLGIPPSRSDPGEPLPSSFML
FKDIGVSEEEPAQEHTDLSASCPSPYIPPPPLSLSHMTLYPHHQGDAEEPEERLSNSDAV
AHMPSSKEREAEDDVAFEFDKEMSVNSLYLVGPEQGLEASGISCEDSHQEEPFEGACDGT
GMGSPVESFEAALEGPREETLERDMALGPGEEGLLEGQFEEPLEMSPMDPQEEEPVEGPL
EDSCKDPAPEEPFAGPLVEHYDVEPEGASEGPAEAESTFSEHTLPTVDATDSLPSSPSVP
TSQPELQIKLEFPLDPESSESKSDILEPDSTVLTPKLEQTKGLLEVKDEIEERPQKRGKT
PASVVDSYVEVARFAAPMSMCEMPDSLQDAREPTIAQLLQEKALYSFSEWPKDRVIINRL
DSICHAILKGKWPSSSQQYDSPSSLANTCVPNSVHQRAGFISTRVQPSQSLNFNIPAPSV
TRLPKYKQRGAGECSPGGWRLTSLPLLQERLVAPPYLPELKRGRRSFEYEGVVLSKQCHS
GEKIPLTVPHRGGALLLNGWQEAAMDLSKAGDLGIGGEVAATVGHMSHQVHPSSHKLPAM
GAMQSVIQSAMQGSVGVDMAGILQAGLIHPVTGQIVNGNLRRDDAFMRRRRGRRRNVEAV
DMGFVKSRGMHVPEQQGRVEVISHSAVSSTSSPPECPPGPSTPTQPEVVAIDREAANKGL
MEWLRQNPNYNMELPTFAPSPGAAMLHSFVERPKQRRHRCKDPTKLDVNSLTGEERVPVV
HRSTGRRLGGAMAPAIKELSRWLDANTEYYVAPDWADVVKHSGFLPEGKFTRILTEPVCR
DQGPRRRGRRPRSEMPKPLLSESPMGPLFMNGSLIGSMDLVSLQNLRNVQGIPLTGLMGF
PHGFAVSAGEDAKNGLSMLPMMLHGIHGAPHMFSVQGLMGQPPTSSAPTSSAAAVTTTTA
SSAASSPSRGPSQASSSTQADGSGMQSDGERKREDKQSTEEKQQGAIGSHSIAAITTAAA
SSCSGVSSSSGSHLAFNPFLVPGLSHGLLYPHMFLPHGGIMALPGMPPTESSGSPKRKKK
RTREEGVVEEASSHSHLQTDSGPPKTPSDGQTGESTVDQAGSEAREHQMEDNVQEEVTGH
DSHASPEVNPEKSIEEERETEENRVMEEEKLPGDEEERESRGVQDSQ
NT seq
8064 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacatattcgttgagccgaatgaagacctctttaaccctgactacatagaagtg
gatagagttctggaggtggccatcacgacagacacagagacaggagaggaggtgacacac
tacctggtgaagtggtgctccctgtcctatgaggaggctacatgggagcttcaggaagat
gtggacccggtgaagattcgggagtttgaggagatcaagagaatccctgaattgaaattt
gtggaaagacctcagccagacaagtgggggaagctggacaaatccaaagactatcgaaac
gggaaccagctgagagagtaccagctggagggcatgaactggctgctcttcaactggtac
aacaggaagaactgcatcctggctgacgagatgggcctggggaagaccatccagtccatc
accttcctcttcgagatgttttccatgggcttgcgggggcccttcctcatcatcgccccc
ctctccaccatcaccaattgggagagggagttccgtacctggacggagatcaatgtcatc
gtctaccacggcagccagatcagccgccagatgatccaccagtacgagatgtaccacaag
gaccagcagggaaacatagtgtcgggcgggtacaagttccacggggtgatcaccaccttt
gagatgatcatggccgactgtccagagctgaagaagatccactggcgctgcgtggtcatc
gacgaagcccaccgcctcaagaaccgcaactgtaaactcctggagggcctcaagctcatg
aacctggaacacaaggtcctactgacgggtacccctctgcagaactcggtggaggagctc
ttcagtcttctcaacttcctggagcccctacagttcccctcagagagcctcttcctagaa
gagtttggagatctgaagactgaggaacaggtgaagaagctgcaggccatcctgaagccc
atgatgctgcggcggctgaaggacgacgtggagaagaacctggcacccaaggaggagacc
atcattgaggtggagctcaccaacatgcagaagaagtactaccgtgccatccttgagaag
aacttcaccttcctggccaagggggccaaccagcacaacatgcccaacctcatcaacacc
atgatggagctgcgcaagtgctgcaaccacccctacctgatcaaaggtgcggaggagaag
attctggatagcttcaggaaaacacacagccccgatgcctgggacttcaacctccaggcc
atgatccaggcggcggggaagctggtgctcatcgacaaactgctgcctaagctgattgct
ggcggccacaaggtgctggtcttctcccagatggtgcgctgcctggatatcctggaggac
tacctcatccagaggaggtacacctatgagcgcatcgatggcagagtgcgggggaacctg
cgccaggcggcgattgacaggttttgtaaggtggactcggaccgctttgtgttcctgctg
tgtactcgtgctgggggcctaggcatcaacttgaccgctgcagacacatgcatcatcttc
gactcggactggaacccccagaatgacctacaggcccaagctcgctgccaccgcatcggc
cagagtaaagcagtgaaggtgtacagactgatcactaggaactcctatgagagggagatg
tttgacaaagccagtctgaagctgggtctagacaaggccgtgctgcaggacatcaatcga
aagggcagcctcaatgggcagatgaccaagattgaggtggaggacctgctgaggaagggg
gcatatggagcgctgatggacgaggaggacgagggctccaagttctgcgaggaggacatc
gaccagatcctgcagcgccgcacacaaaccatcaccattgagacagagggcaagggctcc
accttcgccaaggccagctttgtgtcttctggaaacagaactgatatttccctggacgat
cccaacttctggcagaaatgggccaaaatagcagagctggagattgattccaaagcagag
aaggagagcctggtgattgacacgcctcgtgtgaggaagcagacacgccactacaactcg
ttcgaggatgacgagctgatggagttctcagagctggacagcgactcagaagagaggccc
tgtcgcacacgccgcctcagcgagaggaacagacactacctccgcgcagagtgcttccgt
gtcgagaagaacctgctcatattcggctggggtcgctggaaggacatcctgacccacggg
cgcttcaagtggcaactggccgaatgcgacattgaggtgctgtgccggtcgctgctggtc
tactgcgtgcgccactacaagggcgatgacaagatcaagagctttatctgggacctcatc
acgcccgccaaggatggccataaacaggacttgcagaaccactctgcaggtctgtcggcc
ccagtgcccaggggacgcaagggtaagaaattaaagaaccagctgagtgtgcccgagatg
aagcatgcagactggctggtcaactgcaacccagaggtggtgctgcatgacgacagctac
aagaaacacctcaaacagcactgcaacaaagtacttctgagggtgaggatgctgtactac
ctgaaggcggaggtcctgggagaggctgctgcccagttcctggagggtattcctgccagt
aaactggaggtggcactgcctgacatcgactacatcgagatcccagcaggctggtgggat
gcagaggcagataagtctctcctcataggggtacacaaacatgggtacgagcggtacaac
gccatgcgggccgacccagagctgtgcttcttggagcgggtgggcatgcctgatgtcaca
gcgctctcagccgagcagagtggaggagaggtgatggctgacctcactgacagtaattgc
aaaagtgatgacgtgaaagacgatcctgaaagcaagcaagaggagggaggagtggaaagg
gttgataataaggatgaaaccagctccagcaatgatgcaatggacaagcatgacattgtt
gttcaagacacaggacacagggtccaggagggctttggccaggaagagtttggccaggag
ggcatggagctgaagggtcgccctctgtggcccgccggccctaatcttactgccaggctg
cgtcgcctcatcacagcttaccagcgcttcatgcggcgcgagcccctgcgtcatgacttc
ttgctgccaggggcaagcccgggaccgatgtcctggcaactgggggaggagcttaggcac
tgcacggcaaccgctgccaaacctgaccctctcttcctggagtggcagagaaggtgggtg
atgatgtcagagcaaaggtggacacggcgtgagcaagcagatttctaccgcaccgtgtcg
tcgttcggcgtggtgtatgacccggagaagaaaacctttgactggagtcagttccgctcc
ttcgcccggctggaaaggaaaacggacgagagcctggagagatacttcagcagctttgtg
tccatgtgccgcaccgcctgcagattgccccccaggaaggacgaagggcctctggaccac
aatctgtttgtagagcccatcacggaggagcgagcagcacgcactctctaccgcatcgaa
ctgctgcgcaaggtcagagagcaggtactgcgccacctgctgctgggcccaaggctgcaa
ctgtgtcggcccagcctttacctgcccgtgtggtgggagtgtggcaaacacgaccgcgac
ctcctgattggggcagcccgacacggccttagccgcaccgactactacatcctcaacgac
ccgcaactctccttcctggaggcccaccgcaactacgtccagaaggagaatcacaagggc
taccatcctggggtgcaccacgcaggcatgaccccctcaccccaccaccacccctgctgc
ctgtatgagacgggcctcggccaatgccactctccccagccgccggagtaccaccaccca
gcctcctcctcctcgtcgatccatgcccattctcacccacacatccacgtccatggtcac
ccgccagagatagtgggcacggatcccgggggcagcctaggtatggtgtctgggcccagg
gagggcttcctggactgcccccctctggatgagtccttggagttggcctcactgcagcaa
gagggcctggcctcagattccctccattgcaagtctgccaaggaggccttcaacgggttc
cccttcaactcagcgcagggtggccagagcatgctcaactcgtatggtgtgcagggggag
ctgaatggcgagcagtcggccgaaatggaccctatcatctcgggcaagctgcgcagcgat
gtgttggtgggggagcagggctcctctgaggagacgggcctcatggcgccctcgctggag
ctggaccaggagctgcaggcgccctgggagagcacggaccacgccggcgccgcagacatt
ttcaacgacgctgaccctatcctgggggcgcccgcccttgagacggagttcctggacccc
gaagagcagccgggagatgggggaagggaggacagagcagggggagtgcttgatgactgc
ctgggtatccccccctcccggagcgacccaggggagccgctaccctccagttttatgctg
ttcaaggacatcggcgtgagcgaggaggagcctgctcaggagcacaccgacctctccgca
agctgcccttcaccctacatcccccctccgcccctgtcactgtcccatatgaccttgtac
ccccaccaccagggtgatgccgaggagccagaggagaggctgagcaactcggacgccgtc
gcccacatgcccagctccaaggagagagaggcagaggatgatgtggcctttgagtttgac
aaagagatgtctgtgaacagtctgtatctggtggggccggagcagggcctggaagcctca
ggtatatcatgcgaggactctcaccaagaggagcccttcgagggtgcctgcgatgggacg
ggaatgggatctccagtagagtcatttgaggctgctctagaggggccaagggaagagact
ttagaaagggacatggccttagggccaggggaggaggggcttctagaggggcagtttgaa
gaacccttggagatgtcacccatggatccccaggaggaggaaccagtggaggggcctctg
gaagactcttgtaaagacccagcaccagaagaaccattcgcagggccattggtggagcat
tacgacgtagaaccagaaggggcctccgaggggcctgccgaagcagagagcactttcagc
gaacacacactacccactgttgacgcaacagactctctgccctcgtccccctcagtcccc
acatcccagcctgagctacagatcaaactggagttccctctagacccagagagctctgag
agcaagtcggacatcctggagcctgacagcactgtcctcacgcccaaactggagcagaca
aaggggctgctggaagtgaaggacgagatcgaggagaggccccaaaaaaggggaaaaact
ccagcctccgtggtggacagctatgtagaggtggcacggtttgcagcccccatgtccatg
tgtgagatgcctgacagtctgcaggatgcgagggagcctaccatcgcccaactgctgcag
gagaaagccctctactccttctctgagtggccaaaggaccgggtgatcatcaaccgcctg
gacagtatatgtcacgccatcttgaaggggaagtggccctcgtccagccagcagtatgac
tctcccagctctctggcaaacacctgtgtgcccaacagtgtgcaccagagggctggcttc
atctcaaccagggttcagccatcccagagccttaacttcaacatcccagccccttctgtt
acccgcctgcccaagtacaagcaaagaggtgccggagaatgcagcccaggaggctggagg
ttgacatccttgcctctcttgcaggagaggctggtggcgccgccctatctgcccgaacta
aagcggggtaggcggtcgtttgagtacgagggcgtggtgctcagtaagcagtgccactca
ggggagaagattcccctaacggtgccgcacagaggcggggcgctgctgctcaacggctgg
caggaggcggccatggacctctccaaggccggggatctgggcattgggggcgaagtggca
gccactgtaggccacatgagccaccaggtccatcctagttcccacaaactgcctgccatg
ggcgccatgcaaagtgtcattcagagtgccatgcagggctcggtgggagtagacatggcc
gggatcctgcaggcaggtctcatccaccctgtcaccggccaaatcgtcaacggcaacctg
aggcgcgacgatgccttcatgcgccgaaggagaggcagacggagaaacgtggaggcagtc
gacatggggttcgtcaagagcagaggaatgcacgtcccggaacaacagggtagggtagaa
gtcatcagccattctgcggtgtcgtccacctcctccccaccggagtgccccccgggaccc
tccacacccacccagccagaggtggtggccatcgacagagaggctgccaacaagggccta
atggaatggctgcggcagaatcctaactacaacatggaactgcccacttttgcaccgtct
cctggcgcagcgatgttgcacagctttgtggagcggcccaaacagcggagacatcgctgc
aaagaccccaccaagctggacgtcaactccctaacaggggaggagagggtgcccgtggtc
cacagaagcactggccgcaggcttgggggtgctatggctccagcaatcaaggagctctcc
cgatggctggatgcgaatactgagtactacgtggcacccgactgggcagatgttgtgaaa
cactctggctttcttcccgagggaaagttcacccgcatactcacagagcccgtgtgccgc
gaccaggggccccgccgccggggccgtcgtcctcgcagtgagatgcccaagcccctcctc
tcggagtcacccatgggcccactcttcatgaacggcagcctgatcggcagcatggacttg
gtcagcctccagaacctccgcaatgtccagggcatcccactcacgggcctgatgggattc
ccccatggcttcgccgtgtccgctggtgaagatgccaagaacggcctgagcatgcttccc
atgatgctccacggcatacatggcgccccccacatgttcagtgttcaggggctgatggga
cagccgcccaccagctccgctcccacctcctcagcggctgcagttaccaccactacggct
tcctccgcggctagtagcccctcacgaggccccagccaggcgtcttcaagcacacaagca
gatggctccggcatgcagtctgacggagagagaaagagggaggacaagcagtcgacagag
gaaaagcagcaaggcgcgataggcagccacagcatcgcagccatcaccactgcggcggcc
agcagctgcagtggcgtcagcagtagcagtggcagccacctggccttcaaccctttcctt
gttccagggttgtcccatggactgctgtaccctcacatgttcctcccacacgggggcatc
atggcgctgccaggcatgccacccacagagtcctccggcagccctaagaggaagaagaaa
agaacaagggaggaaggggtggtggaggaggcaagcagccacagccacttacagacggac
agtgggcctccgaaaacacccagcgatggtcagactggggagagcacggttgaccaggcc
gggtcggaggctagggagcatcagatggaggacaacgttcaggaggaggtcacgggacac
gactcccatgcttctccagaggtcaacccagagaagagcattgaagaggagagagaaacg
gaggagaatagagtgatggaggaggaaaaactacccggagatgaggaggagagagagtca
aggggggtacaggattcacaatag
DBGET
integrated database retrieval system
