Salvelinus sp. IW2-2015 (Arctic char): 111961475
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Entry
111961475 CDS
T05762
Symbol
setd1b
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00310
Lysine degradation
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
111961475 (setd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111961475 (setd1b)
Enzymes [BR:
salp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
111961475 (setd1b)
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
111961475 (setd1b)
HMT complexes
COMPASS/SET1 complex
111961475 (setd1b)
COMPASS/SET1 complex (yeast)
111961475 (setd1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
111961475
NCBI-ProteinID:
XP_023839544
LinkDB
All DBs
Position
LG4q.1:29:complement(12766878..12796888)
Genome browser
AA seq
1872 aa
AA seq
DB search
MSKPGERNRLNEDHGRKQSSSLANGMDNHHPVCSSGEKRSHHWRSFKLIIDPALKKGSHK
LYRYDGTTFNMPNPGMPPVDIVRDPRIGRLWTKYKETDLPVPKFKIDECYIGRVPPKEVT
FARLNDNIREGFLTDMCKKFGDIEEVEILYNPKNKKHLGIAKVLFGTVKAAKDAVQTLHN
TSVMGNIIHVELDPKGENRLRYFQLLLNGTFTPRTLPVGGEVSPRSLAEALLACEPLRRL
SESSSSAAVGGTVIPSGGATNTTPLSQDTAYSSLRQDTPQSQGTPHTPRQTGTPFSQDSS
YSSRQGTPAYQSSRAEGSGSYKSRRHESKFQDAYNRRPERRYVHGAGGSGSSSSASSYRG
NFEQSAFKQHQPAPPEPPPSASSFAHTPPPPTSASFKSAFSPYQQAPMPPAFPPSEPPIH
QPVQREAEYRRPPQPPMAPATDFMPVKDKPGTPTIPEPPPEPKAHPSTPLARKLEHCPPS
PGTPTLESERNSLDSRIEMLLKEKRTKLPFLPGGDSSDTEVRMEGSPISSSSSQLSPIPP
YGGTHTSRPSSTGLEDVSPTPLPDSDDEEPIPGTGLLLERVISPDHLHGMNTSDLKDGRL
GNHTPTDKLESHQSSGEDMEISDEDDMPGTPTHSGDCAKGIVVHSAVSPMQSMPLPPPGF
HPLPPQAGFGLPHLASGVPHPMLPHLYPHGMVPMMQIELMSCLPQWGSVHMSFQMQTQML
SRMAQTRGPYPYPPFMNTGGTASAGSAATQFGGPYIPLSMSSTPAASAGGHGQQPWPHPS
MPKFNPAVPPPGYEAKKEDPHKATVEGVLLVIVKELKAIMKRDLNRKMVEVVAFRAFDEW
WDKKEHSAKASLTPVKAGEEEKEKPKPKETMGSSLLENWNKGEGLGYEGMGLGIGLRGAI
RLPSFKVKRKDPPDATSTGDTKRARPSTPVDDELEDIAELPEDGSRMDEDSAALRRRHAR
PLELDSEGEEEVETSGKEESLSDREEEPDETEASERLSSGKESGEDEDEDEAASTSDDES
SESSDEDVASSASSKVVSDSSASGDSSDYDSSSEEEAEEEEEEEEEEEAAVDVESLPDKD
EDRVRTSSSSSSSSSSSSGEEVEPKAPSTPLGPPPEDEPSELACLEEDQRPREGLKLKPN
HRSLSEVAGAVEPGRTSLEDLRPPSPKGVPAEESDLDLEVAIPVLKTEPQDDVTNLRPPT
PTGSLADSDQDSRPKAHTEDKDLPCTPGRGASTSLEPDTALLRSLVVPPMHLPLPPYPAM
GGHSLLLPPPGPMPDLPLPFRARLSTDEDVPRTPGRDLMDRARGLGKSQNSTENVPVTPG
SDAPLTGSSLVSLSSPHISGSPFSYPAQSPVLSAGIPRTPGRDLTFTPVFPDPTALAAGL
PIHRKASSESQLFKEPPLSTLASQTLPPGSLQGQALTSVPKDLPAVPALDLPVPPDITPP
KRKPGRPKSKKAAALAALAALTSPKTEPMELSATPTSMPPSLPHDAQLRELSADTAAAAT
LPDIPGYVGLDSSTVGLDFREGEPEPHTALPLDDRFLPYEEEERVQKPARKVRRGCEKLL
LASHSPATTPPRPHYVPRPRSEFEEMTILYDIWNDGIDEEDIRHLQVTYDKLLQQDNGND
WLNDTLWVQHPPTNIPAVKRKRRDDGMRDHMTGCARSEGYYKIDKKDKIKYLNSNKHLLE
EGPIDMQGKSIPAQPLVSTRAGSERRSEQRRLLSSFSCDSDLLKFNQLKFRKKKIRFCKS
HIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDTIIDA
TKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSRQPINVNEEITYDYKFPIEDEKIPC
LCGAENCRGTLN
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccaggggaaagaaacaggctaaacgaagaccatggcagaaagcagagttca
agtttggcgaacggcatggacaaccaccatcccgtttgcagttcgggagagaaacgaagt
caccattggagaagtttcaagttgattattgacccagctttgaaaaagggatcgcacaaa
ctgtatcgttacgatggaacgacttttaacatgcccaaccctgggatgccacccgtcgat
atcgtccgagacccgagaatcggtcgtctctggacaaagtacaaggagaccgatctgccg
gttccgaagtttaagattgacgaatgttacatcggccgtgttccacccaaggaggtgaca
tttgcaaggctgaatgataacatcagagaaggttttttgactgacatgtgcaagaaattt
ggagacatagaagaggtggaaattctctacaatccgaagaacaaaaagcatttaggaata
gctaaagttctttttggaactgtaaaagcagccaaggatgctgtccagactctacacaac
acgtctgtcatgggcaacatcatccacgtggagctggatcctaaaggagagaatcgcctt
cgatacttccagttacttctgaatggcaccttcacccctcggacacttccggtgggagga
gaagtgtcccctcgtagcctggcagaggctcttctggcctgtgaacccttgcgccggctc
tctgagagcagctcatctgctgcagtgggaggcacagtgatccccagcggcggcgccacc
aacaccaccccactgtcccaggacacggcttactctagcctaaggcaagacacgccgcag
tcccagggcacccctcatacccctcgccagacaggcacccccttctctcaggactccagc
tattccagcagacagggcaccccagcctaccagtctagccgggccgaaggctccggaagc
tacaagtctcgcagacacgagagcaagttccaggatgcctacaaccggagaccggagagg
cgctacgtccatggtgctgggggatcgggatcctcctcatccgcctcctcttaccgaggc
aattttgaacagtctgcctttaagcagcaccaacctgcaccacctgaaccccctccctct
gcctcatcctttgcccacacacctcctccccctaccagtgccagctttaagtcagccttc
tccccctaccagcaggcccccatgccccctgcgttccccccctcagaacctccgatccac
cagcccgtccagcgggaggcggagtaccggagacccccccagccccccatggcccctgcc
actgacttcatgccagtcaaggataagccaggtactccaaccattccagaacccccacct
gaacccaaggcccaccccagcaccccccttgcccggaaactagagcactgcccaccttct
cccggcaccccgacgctggagtcagagcgaaatagcctggactcccgtatcgagatgctg
ctcaaggagaaaaggacaaagcttcccttccttcctggaggcgactcatcagacactgag
gtgcgtatggaggggagccccatctcctcctcttcctctcagctgtcccccatccctcct
tatgggggcacccacacctctcggccctctagcacaggcctggaggacgtcagccctacg
cccctgcctgactccgatgatgaggagcccatcccaggaacaggcttgctcctcgagagg
gtcatctccccagaccatctccatgggatgaacaccagtgacctgaaggatggtcgcctc
ggaaaccacacacccacagacaaattggagagccatcagtcttctggggaagacatggag
atctcggatgaggacgacatgccaggcacgcccacgcacagtggcgactgtgccaaaggc
atcgtggtccactctgctgtgtcccccatgcagtctatgcccctcccaccccccggcttt
catcctctacctccccaagcgggcttcggtcttccacacctggcatctggagtgccccac
cccatgctgcctcacctctacccccatggcatggtgcccatgatgcagattgagctgatg
agctgcctgcctcaatggggcagcgttcacatgtccttccagatgcagacccaaatgctg
agtcgcatggcccagacccgggggccctacccctacccacccttcatgaacacaggaggg
acggcttcagctgggtcagcagccacgcagtttgggggtccctacatacccttgtccatg
agtagcaccccagctgccagtgcagggggccacgggcagcaaccttggccccatcctagc
atgcccaagttcaaccctgccgttcctccaccgggctacgaggctaagaaggaggatcct
cacaaggccactgtggaaggggtgctgctggtcatcgtcaaggagctgaaggccatcatg
aagagggacctcaaccgtaagatggtggaggtggtggcctttagggcctttgacgagtgg
tgggataaaaaagaacactcagccaaggcgtccctgaccccggtgaaggctggcgaggag
gagaaggagaagcccaagcccaaagagaccatgggctccagtctactggagaactggaac
aagggagaaggcctaggctatgagggtatgggcctgggcatcggcctccgaggagccatc
cgcctgccctccttcaaggtgaagaggaaggaccctcctgatgccacctccaccggggac
actaagcgagcgcgaccctccacgcctgtggacgatgagctggaggacatagcggagctt
ccagaagacgggtccaggatggacgaggacagcgcggcattacggaggcgacatgcgcgg
ccgctggagctggacagcgagggagaggaggaagtagagacttctgggaaagaggagtct
ctgtccgatagggaggaggagcctgacgagacagaggcctctgagaggttgtcatcgggc
aaggagagtggagaggatgaggacgaagatgaggcggcctcaaccagtgatgatgaatca
tcggagtcgtcggatgaggacgttgccagttcagcatcctcgaaagttgtctctgattcc
tctgcgagtggggactcctctgactatgattccagttcagaggaggaggcagaagaagaa
gaggaggaagaggaggaggaggaggcggcggtagatgtggagagtctaccggataaagac
gaggaccgggttcggacatcttcgtcctcatcctcctcttcgtcttcctcatctggggag
gaggtggagcccaaggcacccagcactcccttaggtcctcccccagaggacgagccctcc
gagctggcttgtttagaggaagaccagaggcctagggaggggctgaagctcaagcccaac
cacagatccctcagcgaggtggcgggagcagtggagcctggccggaccagcctggaggac
ctccggcccccttcacccaaaggagtcccagctgaggagtcggaccttgacctggaagtc
gccatccctgtattgaagacagagccccaggatgatgttactaacctgcggccgcccacc
ccgacaggctccctggctgacagcgaccaggactctcgacccaaggcccacacagaggac
aaggatctgccctgtacgccaggtagaggggcttccacatccctggagcccgacacagcc
ctcctaagatccctagtagtcccacctatgcacctccccctccccccttacccagccatg
ggaggccactccctcctgctaccgcctcccggccccatgccggacctccccctccccttt
agggccaggctgtccacagacgaggatgtgccccgcacccctggcagggacctgatggac
cgggcaaggggcctgggcaagtcccagaacagcaccgagaacgtgcccgtcacgcctggc
agcgatgcccctctgactggcagcagcctggtcagcctcagctccccccacatatccggc
agccccttctcctaccctgcccagtcccctgtcctgagtgcaggtatcccccgaaccccc
ggcagagatctgacctttacccctgtcttcccagaccccacagccctggctgctggcctt
cccatccaccggaaagcctcttcagaaagccagctgttcaaggagcctccactcagcacc
ttggccagtcagaccttgccccccggctccctccagggacaggccttaaccagcgtgcca
aaagacctgcctgctgtcccggccttagacctcccagtgcccccagacataaccccgcct
aagaggaagcctgggcgacccaagagtaaaaaggctgcagctctggcagctctggcagca
ctgacttctcctaagactgagcctatggagctctcggcgactcccacctccatgcccccc
tctttgcctcacgatgcccagctcagagaactctctgcagacacggctgctgcagccact
cttcctgacattcccggctacgttgggctagactcttccacagtgggcctggacttccgg
gaaggggagccagagccgcatacggctctgccccttgacgaccggttcctcccctatgaa
gaagaggagcgtgtgcagaagcctgcccgtaaggtgcggcgagggtgtgaaaagctgctg
ctggccagccactcccccgcgaccacgccgccacggccccactacgttccacgtccacgc
tcggagtttgaggagatgaccatcctgtacgacatctggaacgacggcatcgatgaggag
gacatccggcacctgcaggtcacctacgacaagctgctgcagcaggacaacggcaacgac
tggctcaacgacacgctgtgggtccagcaccctcctaccaacatcccagcggtgaagagg
aagaggagggacgatggcatgagggatcacatgactggctgtgcccgtagcgagggctac
tacaagatcgacaagaaggacaagatcaaatacctcaacagcaacaagcacctgctggag
gaggggcccatagacatgcagggcaagagcattcccgcgcagcccctggtctccaccaga
gctggctctgagcggaggtctgaacagcgccgcctgctgtcctctttcagctgtgacagc
gacctgctcaagttcaaccagctgaagttccgtaagaagaagattcggttctgtaagtcg
catatccacgactggggtttgtttgctatggagccaattgctgctgacgagatggtgatt
gagtacgtgggtcagaacatccggcaggtgattgctgacatgagggagaagcgctacgag
gacgagggcatcgggagcagctacatgttccgtgtggaccacgacaccatcatagacgcc
accaagtgtggcaacttcgcccgcttcatcaaccacagctgcaatcccaactgctacgct
aaggtgatcacagtggagtcccagaaaaagattgtcatctactcccgacaacccatcaat
gtcaacgaggagatcacctacgactacaagttccccatcgaggacgagaagatcccctgc
ttgtgtggggcagagaactgtaggggaacgttgaactaa
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integrated database retrieval system
