Salvelinus sp. IW2-2015 (Arctic char): 111961476
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Entry
111961476 CDS
T05762
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04110
Cell cycle
salp04218
Cellular senescence
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111961476 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111961476 (rbl1)
04218 Cellular senescence
111961476 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111961476 (rbl1)
Transcription factors [BR:
salp03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
111961476 (rbl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
111961476
NCBI-ProteinID:
XP_023839548
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All DBs
Position
LG1:12983104..13021508
Genome browser
AA seq
1061 aa
AA seq
DB search
MRGDESDSDSGRTDESSVRKSLEMLCQELNMDEQTASEAMQNFKSIWNTYTLEGEVVHWL
ACSLYAACRKGSTPTVGKGVMEGNCVSLTRILRTSKLSLIQFFNKMKKWSDMSNLSQEFR
NRMGRLERTFEVSTVIFRKFEPIFMDMFQDPQGEPPRQPRSRKHRRLPCHVSDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCSNRKDLVNPLFKGLPSIFRLENN
TPDEPPCVIDRLCELHDGLVVEAKGIKEHYFKPYIKRLFERQILKGNEELLTDLLDTPNF
IDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKAAPEPRTCQLSARMQVESNL
QQHFEKKRTLAPSTPLTGRRYLKEKELLVTPVSSATQSVSRLQSMVSGLRSAPSEALMQI
FKSCSRDPIVAILSRVKTLGETFKQHYTKDSEELPGSHMDFAENRMKLAEILYYKILENV
MAQETRRLHGKDMAVLLEQDIFHCSLMACCLEVVLFAYSSQRTFPWIISVFKLRPFYFFK
VIEVFIRSEEGLSRDMVKHLNSIEEQVLECQAWTADSVLWEALEQAHNKVPTVEEVNFPS
SFDTGNNSAGPSHLPLVALSPIIHPRIREFRMGLSSARKDIPPSPLSVHDRYSSPAAGSA
KRRLFGDDSSSQAQQSPSLAKRLMFTPGGTLKIDTPTILNMTTANGQQLSIPLQGIKNDL
GGITLIQVQTRGEPGSPITAQVLLTASPSRPIPAPQAQPDPQQSRPRRTGSLALFFRKVY
HLASVRLRDLCVRLDISAELRGKIWTCFEHSIVQCPELMKDRHLDQLLLCAIYIISKITK
EGHTFQDIMKCYRSQPQASSHVYRSVLIRPSSTREQPSDENMEVDPTSGGKSLISAADKA
DQSSREDALVQGEERGDLIQFYNSVYVLKIKGFALRYAAPSMDNRVWNEMEAPPLSPFPS
MRAQPLSPRRISQRHSIYVSPHKNGSCLTPNSAYTYKINGSPSKELTDINRMIRQGGVSR
KRAFSMEGDYLGESPTKRVCPESEDVLLKRLQDVVSERAHH
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgcggggagacgagtcagattccgactccgggcggacggacgagagttccgtccgaaag
agcttggaaatgctttgtcaggagctgaatatggacgaacagacggcatctgaagcaatg
caaaacttcaagtcgatttggaatacatacacactggagggggaagtagttcattggcta
gcctgctctctctatgcagcctgcagaaagggctccacacccactgtgggtaagggggtg
atggaaggcaactgtgtgtccctgactcgaatactcaggacgtcaaaactgagtttgatt
cagttcttcaacaagatgaagaaatggtcggatatgtccaacttatctcaggaatttcgg
aatcgcatgggccgcctggagagaacctttgaagtgtcaactgtgatctttcggaagttt
gagcccatattcatggacatgttccaggatcctcaaggggagcccccacgacagcctagg
agcagaaaacacaggcgcctgccctgtcacgtcagcgatgtattcaaattctgctggacc
ctgtttgtgtacactaaaggaaatttccgtatgattggcgatgacttggtgaactcatac
cacctcctgctctgctgcttggacttggtgtttggaaatgccctgctatgctccaacagg
aaagaccttgtcaacccacttttcaaaggcttgcccagcatcttcaggttggaaaacaac
accccggacgagccgccatgtgtcatcgatcggctgtgtgagctacacgacggcttggtg
gtggaggccaagggcatcaaggagcactacttcaagccctacattaaaaggctctttgag
cggcagatacttaaagggaatgaggagctgctcacagatctgctggatacaccaaacttc
atagataacaataaagcgataaaccgggagtatgaggagtatgtgctgactgttggggac
tttgacgagagggtgttcctgggggcggatgccgatgaggagatcgggacacctaggaag
gctgcaccagaaccccggacctgccagctgtcagcccgcatgcaggttgagagcaacctg
caacagcactttgagaagaagcgcaccctggccccctccactcctctgacaggcaggcgt
tacctgaaggagaaggagctactggtgacccctgtgtcctcggccacgcaaagcgtcagc
cgactccagagcatggtctcgggcctgcgtagcgcccccagcgaggccctgatgcagata
ttcaagtcatgttcgcgggaccccatcgtagccattctgagcagagtgaaaaccctgggc
gagacgttcaagcaacattacacaaaggactcagaggagctgcctggatcacacatggat
tttgctgagaacaggatgaagctggctgaaatcctctattacaagatcctcgagaacgtc
atggcccaagagacaaggaggctacacggcaaagacatggctgtgctgctggagcaggac
atcttccactgctctctgatggcctgctgtctggaggtggtgctgtttgcctacagctcc
cagcgcaccttcccctggatcatcagcgtcttcaaactacgaccgttctacttcttcaag
gtgattgaggtgttcatccgctcggaagagggtctgtcccgggacatggtgaagcacctg
aactccatcgaagagcaggtgctggagtgccaggcctggacagcagactctgtgctgtgg
gaggccctggagcaggcgcacaacaaggtccccaccgtagaggaggtgaacttccccagt
agttttgacacggggaacaacagtgctggtccctcccacctccctctggtggccctctcc
cccatcatccacccccgcatccgcgagtttaggatgggcctgagcagcgcacgcaaagat
attcctccgtcgcccttatccgtccacgatcgttacagctccccggcggcgggcagtgcc
aagcggcgtctgtttggggacgacagcagcagccaggcccagcagtctccgtcccttgcc
aagaggctcatgttcacacccggcgggacgctgaagatcgacactcccaccatactcaat
atgaccacagccaacggccagcagctcagcatcccactgcaaggtataaagaatgatctg
ggaggcatcacactgatccaggtgcagaccagaggggagcccggcagtcccattacagcc
caggtcctcttgacagcctcccccagccggcccattccggcaccccaggcccagccagac
ccccaacagagccggccccgacgcaccggctccttggccctcttcttcaggaaggtgtac
cacctggccagtgtgcggctgagagacctgtgcgtgaggctggacatctcggcagagctg
cggggcaagatctggacttgctttgagcactccatcgtccagtgtccggagctgatgaaa
gacagacacctggaccagctcctcctttgcgccatctacataatctctaagattacgaaa
gaaggccacacattccaggacatcatgaaatgttaccgcagtcaaccacaagccagcagt
catgtctaccgcagtgtcctcatccggcccagcagcaccagagaacagccctcagacgag
aacatggaagtggacccaacctctggtggaaaatccttaatttcagctgctgacaaagcc
gaccagagcagcagagaggatgctcttgtccaaggcgaggagcgcggcgacctcatccag
ttctacaactccgtctatgtgctgaagattaagggctttgccctccgatacgccgccccc
agcatggacaacagggtatggaatgagatggaggcccctcctctgtccccgttcccctcg
atgagagcccagcccctgtccccccgccgcatctcccagagacactcgatctacgtgtcc
ccacacaagaacggctcctgtctcacccccaactctgcctacacctacaagatcaacggc
agcccctccaaagaactgactgacatcaaccggatgatccgacagggcggggtgagcagg
aaaagggccttttccatggaaggcgactacttgggcgagtcccccaccaaacgggtgtgt
cccgagagtgaggatgtgctgctcaaacggctgcaggacgtggttagcgagagagcccac
cactga
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