Salvelinus sp. IW2-2015 (Arctic char): 111961525
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Entry
111961525 CDS
T05762
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
111961525 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111961525 (depdc5)
Membrane trafficking [BR:
salp04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
111961525 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
IML1_N_fung
Motif
Other DBs
NCBI-GeneID:
111961525
NCBI-ProteinID:
XP_023839636
LinkDB
All DBs
Position
LG4q.1:29:14063910..14096974
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AA seq
1606 aa
AA seq
DB search
MKNKTYKLVVHKKGFGGSDDELVVNPKVFPQVSLGDIIEIAHPTDEYSPLLLQVKSLKED
LQKETISVDQTVAQAFKLRAYQDVIVNIVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL
VSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCEM
WDFDIYGDLYFEKAVSGFLSDLFAKWKERYCSHEVTVVLFSRTFYNAKTLEEFPEILRGS
IRQDHEGRFYEDFYRVVAQTERRDEWTSLLVTIKKLFIQYPVLVRLKEAVGFPSGHNSTA
AQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDNG
IGVDLVCMGEQPLHAVPLFKLHNRTVPGDSRLGDDYNLPHWINHSFYTSKSQNSCSCFTP
RIKLAGRKLHAEKFKNNKEHTLGAPKDENSLPIQVDYDAHDAQVFRLPGPSRAQRSTNFR
VVREREVSGRRSWGSADVSGVLGGGVSPPVRSCGPDEQRSLASDDSLGRVSNILLIPRLP
PAQYGEVSSSLGYTSTRELLEKMMESQRDSSAPGRFTVGSAESTLHVRPGGYTPQRALIN
PFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSEQRDPAHTSAELL
ELAYHEATGRRTASERRQAGENGLYSSGGMEEYTHGSPASSNSTGTPVNRGSSLEDFSSG
SPDPTLLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPEWQTLQNDYTEGCYDLLP
HTDLERRDDEAPVMSAPQVFEEFICQRLMQGYQIIVQPNKRKPQPAVAPPLSSSPLYTRG
LVSRRRPEEEESLYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESAQIQYTYSLCPPHSD
AHFLSCWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVA
DGEGHWDVYGEGVGTVAGREGMTGTGDWALLDGFIRFLEGLNRIRRRHRSDRIIRKGPAM
KGLQVTGPLSAYPPEPVAPPLGKKGTSALSALLELEQNQKTLEEQQQQGKPSAATSESST
VTMTTTYVDSPRKDAAFILDFIRSPRSSYIYHSQVSTDPAEGGATDKGGQVGAGVVATGG
AAAQATGDTGPSLATETSGQSGTGALCLSSSSTLMEILEAIKHPTTGVQLLPEQKGLPPN
CFISAEIVHWLVNNVEGVATQGMAVDIMQKMLDEGLVTHASGDAMRTFVYGFYFYRIVAE
KDGERGPTSQLPPPVVQGWSTAALEDFTLFQRKWFEVAFVLEERRPCDLPAFLLPWLPSR
PASYASRHSSFSRSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCYYHGNFS
LNAAFEVKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALPSYLYGDPLRAQL
FIPLHVHRLLRDSSDNLFEGFEPETYWDRMQLFQEAILYRFGFVQDKFSASAFNFPSENK
PQYIHVTGTVFLQLPYSKRKYSSGQQRRRRNSTASASQGLFGSEELVGYYWAYNTMLTKA
WRTGVLGDEKLADRLLRDFTDFCANKDKRLVNFWDSCQEKMNASAP
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataaaacatacaaacttgtggtgcacaagaaaggctttggaggcagtgatgat
gagctggtggtgaaccccaaggtgttccctcaagtttcccttggggacataattgagatt
gcacaccccacagatgaatacagccctctcttgctgcaagtgaagagtctcaaagaagac
ctccagaaagagacaatcagtgtggaccagacagtggcgcaagccttcaaactccgggca
taccaggatgtcattgtaaacattgtggatccaaaggatgtaactctggacctcgtagag
ctcacgttcaaagaccaatacattggaaggggagacatgtggcgactgaagaagagtctg
gtgagcacctgtgcttatgtgacccagaaagtggaatttgcagggatcagagcccaggcc
agtgagttatgggtgaaaggagagaaggtcacctgtggctacatcagtgaagacaccagg
gtggtgttcaggtcgacctctgccatggtgtacatcttcatccagatgagctgcgaaatg
tgggactttgatatctacggggatctctactttgagaaagcagtcagtggttttttgtct
gatctttttgccaaatggaaggagaggtattgcagccatgaagtgacagtggtgcttttc
tcacgcactttctacaacgctaaaaccttggaggagtttcctgagatattgagaggttcc
atcagacaggaccacgagggccgtttctatgaagatttctacagggtagtggctcagact
gagagacgtgatgagtggacctctctactggtcaccatcaagaagctcttcattcagtat
cctgtcttggtgcgactaaaagaagcggttggtttcccctccggccataactctactgct
gctcaggggaattaccttgaggccattaacctgtctttcaacgtctttgacaagcactac
ataaaccgcaactttgaccgcaccggtcagatgtctgtggtcatcaccccgggggtgggc
gtgtttgaagtggaccgactgctcatgatcctaaccaagcagcgcatgattgacaatggt
atcggtgtggacttggtgtgtatgggagagcagccacttcatgcagtgcctctatttaag
ctgcacaacaggacagtgcctggagactcacgactgggggatgactacaacctgccccac
tggattaaccacagcttttacacatccaaaagccagaactcctgcagctgcttcactcct
cgcatcaagctggcaggacgcaagctccatgcagaaaaattcaagaacaacaaagagcac
actcttggggctccgaaggacgagaacagccttcccatccaggtggactacgatgcccat
gatgcacaggtgttcagactccccgggccgtcccgagcccagaggagcaccaacttcagg
gtggtccgagagagggaagtgagtggaaggagaagctgggggtctgcggatgtgagtggg
gttctagggggcggtgtgtccccccctgtccgctcttgtgggcctgacgagcagcggagc
ctggcctctgatgacagcctgggcagggtgtccaacatcctgctgatcccccgtctgccc
ccagcccagtacggagaggtcagcagctccctgggctacaccagcaccagagagttgttg
gagaagatgatggaatctcagcgggactccagtgctccggggaggttcactgtggggagt
gctgagtccaccctccatgtgcgcccagggggctacacccctcagagggccctcattaac
cccttcgccccctcacgcatgcccatgaagctcacctccaaccgcaggcgctggatgcac
accttccctgtgggtccgtcaggagaggccatccagatccaccaccagaccagacagaac
atggctgaactgcagggcagcgagcagagagaccccgcccacacctccgccgagctcctg
gaactggcctatcacgaggccactggcagacggacagcctcagagagacgacaggcagga
gaaaatgggctgtactccagcggagggatggaggagtatactcatggcagcccagccagc
agcaacagcactggaacaccggtaaaccgtggctcctcgttggaggacttttcctctggc
agtccggatccaaccctgctgctgtctgcccccccgacagtgcccagcttctgttgcacg
gtgggggtagactggaaatctctgaccacacccgcctgtctgcctctcaccaccgactac
ttccctgaatggcagaccctgcagaacgactacactgagggctgctacgacctgctgcca
cacactgatctggagaggcgggatgatgaggccccggtgatgagtgcccctcaggtgttt
gaggagtttatctgtcagcggctgatgcagggctaccagatcatcgtccaacctaacaag
aggaaaccccagcctgctgtggccccgcccctcagcagtagtccactctacaccagaggg
ctggtctctcggcgcaggccagaagaggaggagagtctgtactggctcagtatgggccgt
accttccataaagtctgcctgaaggataaaatcatcactgttacccgctaccttccgaag
tacccgtatgagtcggcccagatccaatacacctacagtctgtgtccccctcactctgac
gcccacttcctgtcctgctgggtggagtttggtcacgagagactggaggagtacaagtgg
aactacctggaccagtacatctgctctgctggctctgaggacttcagtttgatagactct
ctgaagttctggcggacccgcttcctgctgctgccggccggaggggctagacgtgtggcg
gacggggaggggcactgggacgtttacggggagggagttggcacagtggcgggcagagag
ggcatgacgggcaccggggactgggccctgctggatggcttcatccgcttcctggaggga
ctcaaccgcatccgcagacgccaccgctctgacaggatcatcaggaaaggaccggcgatg
aagggtttgcaggtgactggtcctctctctgcctaccctccggagcctgtagcaccccct
ctgggcaagaaaggcacctcggctttatcagctctcctggagttggagcagaaccaaaag
actctagaggagcagcaacaacaggggaaaccctcagctgccaccagtgagtcttccact
gtcaccatgaccactacatatgtggacagccctcgcaaggatgctgccttcattttggat
tttatacgtagccctcgctcctcctacatctatcactcacaggtttctacagatcctgct
gaaggaggggccacagacaaaggtggtcaggtaggggctggggtggtggcgaccggtggg
gctgcagcccaggcaacaggggatacaggacccagcttagccacagaaaccagtggacag
tctggtactggagccttatgtttgtcctcatcctccaccctgatggaaatactagaggcc
atcaaacaccccacaacaggtgtgcagcttctacctgagcagaagggcctgccccctaac
tgcttcatcagtgctgagatcgtccattggctggtcaacaacgtagagggtgtggccaca
caaggcatggctgtcgacatcatgcagaagatgctggatgagggcctggttacccatgca
tcgggggatgccatgaggacctttgtctatggcttctacttctacaggatagtggcagag
aaagacggcgagcgaggccctacatcccagctgccccctcctgtggtacagggctggtca
acggcagccctggaggactttaccctgtttcagaggaagtggtttgaggtggctttcgtc
ctggaggagcgtcgaccttgtgacctcccggccttccttctgccctggctgcccagccgg
cccgcctcctatgcaagtaggcacagctccttcagccgcagctttggaggacgcagccag
gccgcagcactgctagctgccactgtaccagagcagaagacagtcaccttggatgtggac
gttaacaatcgtagcgaccgcaccgagtggtgcagctgctattaccatggcaacttctcc
ctcaacgctgccttcgaggtcaagctgcactggatggccgtcactgcagctgttctcttt
gagatggtccaaggctggcacagaaaggctgcctcctgtgggttcctgttggtgcccgtc
ctggaggtgccctttgccctaccctcctacctatatggtgacccgctgcgggcccagctc
ttcatccctctccacgtccaccgtctgctgagggacagcagcgacaacctgtttgagggg
tttgaaccagagacgtattgggatagaatgcagctctttcaggaggccatactataccga
ttcggttttgtccaagacaagttttctgcctctgctttcaacttcccgtcagagaacaaa
ccccaatacatccatgtaacaggcacggtgttcctccagctgccctactccaagaggaag
tactctagtgggcagcagcggaggaggaggaattcaacagcatcagccagtcagggcctg
tttggctcggaagagctggtgggttactactgggcctacaataccatgctgaccaaggct
tggaggacgggtgtgcttggggatgagaagctggctgaccgcctgctcagagacttcact
gacttctgcgccaacaaagacaagaggctggtgaacttttgggacagctgccaggagaaa
atgaacgctagtgctccatga
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