Salvelinus sp. IW2-2015 (Arctic char): 111961545
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Entry
111961545 CDS
T05762
Name
(RefSeq) protein turtle homolog A isoform X1
KO
K22655
immunoglobulin superfamily member 9
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111961545
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Other
111961545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_VEGFR-1-like_5th
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
111961545
NCBI-ProteinID:
XP_023839669
LinkDB
All DBs
Position
LG4q.1:29:15533745..15561370
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AA seq
1740 aa
AA seq
DB search
MGPKRDYFLDVTMVTALCLLWVTHGQKPEVRAKVGGVVEMACRLPLPDAGASVPLHVVEW
VRQGFDIPVLIKFGVYAPRVHPNYEGRVSLVRNTVLRVKGLLIEDQGLYECRILLLDKTT
DETRNGTWTLLYVTAPPIFSKTPPPVMEALVGNPLSLACVARGNPPPTITWAKDGTLIGG
DKVEVLSGTLSLRAVDREAGGQYECLASNAEGNVTHVTKIKVKGPPVIVIPPKDTSLNMT
QDAQLQCQAVADPPNMTYVWQREGENVYHIEALKSRVKIMVDGTLLITRITPDDSGNYTC
MPTNGLLTPPTASANLTVTHPAQALLMPPQTYLPTGLGGLVSCPVRAQPPLLRVDWTKDG
QPLDLAMYPGWTLTSEGSVFMATANDDATGVYTCTPYNSYGTMGQSGPTTVILQDPPSLS
VCPRKEYRQEVGRVLVIPCQTTGDPVPSITWSKVGPATRSQYSVAANGSLLLLPLSKDHQ
GEWVCSVTNRVATVKASTLISVLGTSPHAATLVSVTPGAKQANVSWEPGFDGGYTQKFTV
WLKKMSVGDSGEKQEWLSVPVPSSSGSSLQVTGLVPATEYQFSVLPHNKVGTGPFSEIAT
IRTLNPLPRRAKLEPPTSLSANQSLAGIVLQWSPLSQFLPITGFVLQSRTEQGEWFNLDE
DIGANRSVMIVPGLRKDCVYELRLLSRRGELLSEPSPSVNVSTMGMDMYPATSRFLEFVP
EPLLAGVMGGVGFLCLALILVLGTVCIFSHKRDQRRRKMKDDLPSVIYKSPPSTSPLASS
PDSVLKQKLLPPHCHPHYPGSQSSCSSSQSDHSSFGRPSHSEYKDQRQQLLSCPPPPPHY
AVHHHHHLPRIGSSPYSPLEFISRGPDGRFIVQPYDQSSVPSSHTMRSLRKNFPQSTGVQ
RSVSLRSEKSVGREPPFVLSVDLPPCGGTDPNPTTRVRAMAKHLSLHGRFYLDEEQDSCA
EHPDKSSLYSDSNSDMSPQPSLEESNPGYPSLKRAVQPATASTLVLQMEHEKETGNLSRC
LKLAREREKLERELRKYTLDSNATLGGKREGPGSDEERWRESEECDPIWKPQDNTSPHSH
THHLSHPQVNRGCSSMAKVPSPPSYIHWEASPLTSATSLVPAHLTSERTAALHCDPPLTQ
CPSLSPVTQHPFRSERAECHSKGRVSHQPLDRQEGMETARVKTHTGLCDETHMSTELKRG
DLESHEWNSKSNQFNVSISHKSKPDVSVNKVPGSGRVELARSQPCEESSLHTAVDLSECV
EMSVDEPEDEGSVDPPTIPIRHQRHAHQVNNESPLAEKDHRGPQTMKDHRAHPLAHRISP
VPREEREKWHRRSSRSRSPATIQPPRPALRKAISLGGFQNRNSGNHQRSQSLDSRRQSLG
NFLTPDAWVDSLSQENCSSPFSFRPDSVFFEPENTLTPETPTHTEAPLASPPPAPPPPPP
QDPRPPSRAPQQLCEAYGGDMHIQSVRKPVLERQTQLPPTPPSVPSSPSHPPHDPRKKAS
IFPDAYRWPITYQEALRSVQRMEARKNASLPRDHREHPRPPDCRGRTTAPSLLRGYSWPA
PHHTPQPPQEEEKKQEEVVVEEEKEQRYGGHEVEIGRYHRGVPDSGGSYSSYASQSSGRG
SLEPPNGRLSICLSPTLTSSPESTEEMQGNTVESHLQDMEALKMRKASVDENYEWDSADV
SIQLGDQDLEGRGLFSSVSLLKSTPSLHHSREGLKESVHFQGHRHVTSRHSEPEPETVMF
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaaaaagagactattttttggatgttaccatggtgacggcactgtgccttctg
tgggtcactcacggtcagaagccagaggtgcgtgccaaggtagggggtgtggtggagatg
gcgtgtagactgccactccctgacgcgggtgcgtctgtgcccctgcacgtggtggaatgg
gtgcgccagggattcgacatcccagtcctgatcaagtttggagtgtatgctcctcgggtg
catcccaactacgagggccgtgtgtctctggtgaggaatactgtcttgagggtgaagggg
ctcctcatagaggaccagggcctgtatgagtgtcgcatcctcctgctggacaaaaccaca
gatgagacccgcaatggcacctggaccctgctgtatgtcactgctcctcctattttcagc
aagacccctccccctgtcatggaggctctagtggggaatcctctctctctggcctgcgtt
gcccgcggtaacccaccacccaccataacctgggctaaagatggtactctcattggagga
gacaaggttgaggttctgagtgggacgctgtctctcagagcagtggacagggaggcagga
ggacagtatgaatgtctcgcctccaacgcggagggcaatgtgactcatgtgacaaaaatt
aaagtcaaaggtcctccagtcattgttatccccccgaaggacacctccctcaacatgacc
caggatgcccagctgcagtgccaggcggtggctgatcctcccaacatgacctatgtgtgg
cagagagagggagagaatgtctaccacatagaggctctgaagtcccgtgtgaagatcatg
gtggacggcacccttctcatcacccgcattaccccagacgattctgggaactatacctgc
atgcccaccaacggactgttgactccgcctactgcatctgccaatctcactgtgacacac
cctgcccaggctctcctgatgccaccgcagacatatctccccaccggcctgggaggtctg
gtctcctgccctgtgagagctcagccacccctgctccgcgtcgactggaccaaggatgga
cagccactggatctggcaatgtacccaggatggacgttgacgtctgaaggctcggtgttc
atggctactgccaatgatgatgcaacaggcgtatacacgtgtaccccctacaacagctac
gggaccatgggccaatcagggcccacgacagtcatcctacaggaccccccgtcactcagc
gtgtgtccccgtaaggagtatagacaggaggttgggagagtgcttgttattccctgccag
accactggagatccagtccctagtataacctggagcaaggttggacctgccacacgctct
cagtactctgtagcagctaacggctccctgctgctgcttcctctcagtaaagaccaccag
ggggagtgggtgtgcagtgttacaaaccgcgtggccactgtcaaagccagcactctcatc
tcagtgctgggcaccagtccccatgctgccaccctggtgtctgtcactccaggggcgaag
caggccaatgtctcctgggaaccaggctttgatgggggatacacccagaaattcacagtc
tggttgaagaagatgtctgtgggtgacagtggggagaaacaggagtggctctctgtgccc
gtgccctcctcctctggctccagtctgcaggtgacggggctggtccctgccacagagtac
cagttcagtgtcctgccacacaacaaagtgggcactgggcctttcagcgaaatcgccacc
atccgaactctgaatccactcccaaggagagcgaaactagagccacccacatcgctgtca
gccaatcagagcttggcaggtatagtcctgcagtggtcccccttgtctcagttcctgccc
atcactggatttgtcctccaatcgcgcactgagcaaggggagtggttcaatctggacgag
gacatcggtgccaataggagtgtgatgatcgttccaggactgcgcaaggactgtgtgtat
gagctgcggctgctgtcccggcgaggggagttgctgagcgagcccagtccatcagtcaac
gtctccaccatggggatggatatgtaccctgccacttcccgcttcctggagtttgttccc
gagccactattggctggagtgatgggcggcgtgggcttcctgtgtttggccctcatcctg
gtcctagggacagtgtgtatcttcagtcacaagagagaccagcgacgcaggaagatgaaa
gatgatctcccttctgtcatctataaaagccccccctcaaccagtccgcttgctagcagt
ccagacagtgtgctgaagcagaagctcctccctccccactgccacccccactatcccggc
tcccagtcctcctgctcctcctcccagtcggaccactcctcctttggcagacccagccac
agtgaatacaaggaccagcgccagcagctgctctcctgccccccacctcctcctcactat
gccgtccaccaccatcaccacctccccaggataggctcttccccctattcccctctagag
tttatctctagaggtccagacggtcgcttcattgtgcagccctacgaccagtcctccgtc
ccctcctcccacaccatgagatccctgaggaaaaacttcccacaatccactggggtccag
aggtcagtgtcccttcgctctgagaagagcgtggggagggagccgcctttcgtcctctca
gtggacctacccccttgtggtggaactgaccccaaccccacgaccagggtacgggccatg
gccaaacacctctccctccacggacgcttctacctggatgaggagcaggacagttgtgct
gaacatccggacaagagtagtctctactcagacagtaactcagacatgtccccccagcca
agcctggaggagagcaatccaggatacccatccctaaagcgggccgtccagccagccacc
gccagcaccctggtcctacagatggagcatgagaaggagaccggcaacctgagcaggtgt
ctgaagctggcccgggagagagagaagctggagagagagctacggaagtacacacttgat
agtaacgctactttaggcgggaagagagagggaccaggcagcgacgaggagaggtggaga
gagtctgaagagtgcgatccaatatggaaacctcaggacaacacttcaccacacagtcac
acccatcatctcagtcatccccaggtcaacagggggtgctcaagcatggccaaagtccct
tcacccccgtcctatattcactgggaggccagccctctcacttcagccaccagccttgtc
ccagcacatctcacatctgagaggacagcggccctccactgtgaccctccactcacccag
tgtccctctctgtcacctgtcacacaacaccccttcaggtcagagagagcagagtgtcac
tctaaggggagggtgagccaccagccactagacaggcaggaagggatggagactgcaagg
gtcaagacacacacagggctttgtgatgaaactcacatgtcaacagagttgaagagaggt
gacttggagtcacatgaatggaacagcaagagcaatcaatttaatgtcagcatttcacac
aagtctaagccagatgtctctgtcaacaaagtgcctggttcagggagagtggagttagca
aggtcacagccatgtgaagagtcatctctacacacagcggttgacctctcagaatgtgta
gaaatgagtgtggatgaaccagaggatgaaggctcagtggatcctcctacaattcctata
aggcaccagagacatgcccatcaggtaaacaatgagtccccattggctgagaaagaccac
agaggaccacagaccatgaaagaccacagagcccatccattggcccacaggataagccca
gtgcctagggaggaacgggagaagtggcacagaaggtcatctcggagtagaagcccagct
accattcagcctcctaggccggcgctcaggaaggctatcagtctaggaggctttcagaac
aggaacagcggcaaccaccagcgcagccagagtctagactccaggagacaatccctgggt
aacttcctgacgcctgacgcctgggtcgactctctcagccaggagaactgctcctctccc
ttctccttccgcccagactctgtcttctttgaacccgaaaacaccttaactcctgagacc
cccacccacacagaggccccccttgcttctccgcctcccgctcccccgccacctcccccc
caggacccccgacctcccagcagggccccacagcagctctgtgaagcatatgggggtgat
atgcacatccaaagcgtaagaaaaccggtgctggagagacagacgcagctccccccaacc
cctccttcagtgccttccagccccagtcatcccccccacgaccccaggaagaaggcttcc
atcttcccagacgcctacaggtggcccatcacctaccaggaggccctgaggtcggtgcag
cgcatggaggccaggaagaatgcatctctccccagggaccacagagagcaccccagaccc
ccagactgtagaggcagaaccacagctccctccctgctcaggggttacagctggcctgca
cctcaccacactcctcagccaccccaggaggaggagaagaagcaggaggaggtagtagtg
gaggaggaaaaggagcagcggtatgggggacatgaggtggagattgggaggtatcatcgg
ggagtgccagactcgggggggagctacagtagctatgccagccagagcagtggcaggggg
agtctggagcctccaaacgggcgcctgtccatctgcctgtccccaaccctcaccagctct
cctgagtccaccgaggagatgcagggaaacacagtggagtcacacctacaggacatggag
gcattgaaaatgagaaaggcctcagtggatgagaattatgagtgggattcagctgatgtg
tccattcagctgggagatcaagaccttgaaggtagaggcctgttctcctcagttagtcta
ctgaagtctactcccagcctgcaccattccagggagggcctcaaagagtcggtccacttc
cagggtcatcgccatgtgaccagccgccactcagaacccgaaccagagactgtgatgttc
tga
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