Salvelinus sp. IW2-2015 (Arctic char): 111961647
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Entry
111961647 CDS
T05762
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1 isoform X1
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111961647
Membrane trafficking [BR:
salp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
111961647
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
111961647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
111961647
NCBI-ProteinID:
XP_023839841
LinkDB
All DBs
Position
LG4q.1:29:21198356..21208399
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AA seq
1119 aa
AA seq
DB search
MSHKQQGEGLGGAVGEEQKSPAVPRNRQPNGTAGGGGGEGVPVRRSWRPCQMLGQDGQGP
YLHHHHHHPSIPQQGSGRGPPRHHRRSPSGPGLSRQGEGVAMEPPRHTQPPRPGVARYRR
QGEPRVRVHRRRQPPRDGQEIHDPPFPHQWSSDASLTEQSDMTGPATMKQQHPLHSPQPH
HTQDSGAPDLTAGTLTPTHHTPCPPASDIPPQELPPPLTNRESPQPQEEEEKEEEGCSSS
ITQSVSAQSGFDIQTDLEWNQEQGGHGEGDLKETSLGEEDKRERDLGEDNQEDGTNGHCS
DTDSAASLSMEAPSLSPPTRQSPPTSPSPFSPPPLQSELSDQCSDEFSPSPTHDTDILPD
DESCTDSPLSHSESFTFTDSYPKTYAEFYNESYPQSESITESYTEPYAKSYPQSFPEPLK
LMNYPDLDRELHRRSEADPDEPYEEPYPEPYSCRQREHVYKGATDTEPPTDPQPHASWPG
WDVGLPQTSPPWQGRSVGSRLHHYDDTTSDGEGDSLKESSSSQSLGPPPRYVQGETQAEY
PSSGQPISGELQDEQARMELRLPAEGLSEDSVRGSGNAISLAIRDIREAIEEVKMKTVRS
PYTPDQPIEPVWVMRQEVSPTEEEYSPQQPPGGNVSPVSQSPSHSTQVPARDTVPVPVRV
PVPSPAQVLAQVPEPVCHVRAESSRTHQVQHREHRAQKEPPRPPSIEEIRRSMPFFPSYV
EVPGPCDPEDLIDGIIFAASYLGSTHLLSERTPTKSARMQQAQEAMSRVRTAQKQAKHRK
KTEDEVPSSTEVDLFMSTQRIKVLNADTQQESMMDLPLRTISYIADIGNMVVLMARGKMV
RSRSAQENLNQTSDHTNSPARDDLPQYRMVCHVFESEDAQLIAQSIGQAFSVAYQEFLRA
NGIDPEDLSQREYSDLLNTQDMYNDDLIHFSKSENCRDVNIEKQKGEMLGVVIVESGWGS
ILPTVIIASMMHSGPAEKSGRLNIGDQIMTINGTSLVGLPLSTCQSIIKGLKAQCRIKLN
IVRCPPVTMVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVA
TPHEKIVDILSNAVGEIHMKTMPAAMYRLLTAQEQPVYI
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgagccacaagcagcagggggaggggctaggtggtgctgtgggggaggagcagaagtct
ccagctgttcccagaaacaggcagcccaatggcacagcaggaggaggcggaggagagggg
gtccctgtccggagaagttggagaccctgccaaatgctcggtcaggacgggcaaggtcct
tatcttcatcaccaccatcatcatccctctattccgcaacaaggctcgggccgcggcccc
ccacggcaccataggcgttcaccctcagggccgggcctgtccaggcagggggagggagtg
gctatggagcctcctcgccacacccagccgccccgccctggcgtggcccgctaccgccgc
cagggggagcccagggtcagagttcacagacggagacagccgccgagagacggccaagag
atccacgacccgccgtttccacatcaatggtcatctgacgcttctctgactgagcagagt
gacatgactggtccagcaacaatgaagcagcagcaccccctgcactcccctcaaccccac
cacacacaagacagtggagcacctgaccttactgctggtactcttacgccaacacaccac
acaccatgtccccctgcatctgatatccctcctcaagagctgccaccaccccttaccaac
agagagtctccccagcctcaggaggaagaggagaaggaggaggaagggtgcagctcatcc
ataactcagtctgttagtgctcagagtggatttgacatccagacagacctagagtggaac
caggagcaggggggccatggagaaggggacctaaaagagacaagtctgggtgaagaggac
aaaagagagagggatttgggagaggacaaccaggaagatggaacaaatggccactgttct
gacactgatagtgctgcctctctaagcatggaggctccgtccctgagcccacctactcgc
caatcaccacctacctctccatctccattctcgccccctccacttcagtctgagctctcg
gaccaatgtagtgatgagtttagcccaagccccacccacgacactgacatactgcctgac
gatgagagctgcactgattctccactgtcccattccgaatctttcaccttcacagactcg
tatccaaagacctatgcagaattttataatgagtcctacccacagtcagaatccatcaca
gaatcctacacagagccctacgcaaaatcctacccccagtctttccctgaacccttgaaa
ttaatgaattatccagacttagacagagagctccacaggagatctgaggccgaccctgat
gagccatatgaggaaccctacccagagccctatagttgtagacagagggagcatgtttat
aagggagctacagacactgagccacccactgatccacaaccccatgcctcctggccaggt
tgggatgtggggttaccacagaccagccccccttggcagggtcgctcagttggctcaaga
ctgcaccactacgatgacactacgtctgatggggagggcgacagccttaaagaaagctcc
agctctcaaagcctggggccacctcccaggtacgtgcagggtgaaacccaggcagagtat
cccagctctgggcagcctatttcaggcgagttacaggatgagcaggccaggatggagctc
aggcttccagcggaaggcctttcagaggacagtgtcaggggatcagggaatgccatctct
ctggccatcagggacatccgagaggccatagaggaggtgaagatgaagacggtgagatcg
ccctacactcctgaccagcccatagagcctgtgtgggtgatgagacaggaagtcagtcct
actgaagaggagtattccccacagcagccaccgggaggcaacgtgagtcctgtctctcag
tcaccttcacactctacccaagttccagctcgcgacacagttccagtccctgtccgtgtt
ccagtcccatccccagcccaagttctggcgcaagtcccagagcctgtctgtcatgtgagg
gcagagtcctccagaacacaccaggtacagcacagggagcatagagcgcagaaggaaccg
cctaggcctccatcgattgaggagatccggaggagtatgcccttctttccctcatatgtg
gaagtcccagggccatgtgacccagaggacctgatcgatggcatcatctttgcagccagc
tacctgggctccacccacctgctgtcagagaggacacccactaagagtgcccgcatgcag
caggcccaggaggctatgagccgtgtcaggaccgcccaaaagcaagctaaacacagaaag
aagactgaggatgaggttccttcctccactgaagtggatctcttcatgtctacacagagg
atcaaagtgctgaacgcagacactcagcaggagtccatgatggacctgcctctgaggacc
atctcctacattgctgacataggcaacatggtggtgctgatggccagggggaagatggtg
cgctccaggagcgctcaggaaaacttgaaccaaacctctgaccacaccaacagccctgcc
cgggacgacctcccccagtacaggatggtctgccacgtgtttgagtcagaggatgcccag
ctcatagcccagtccattggccaggcattcagtgtggcatatcaggagttcctgcgggcc
aatggaatcgacccagaggacttgagtcagagggagtacagcgacctgctcaacactcag
gacatgtacaacgatgacctcatccacttctccaagtcagagaactgcagagacgttaac
atcgagaagcagaagggagagatgctgggggtggtcatagtggagtcaggctggggctcc
atcctgcccaccgtcatcattgctagcatgatgcattctgggccagcagagaagtctggt
cgactcaacattggtgaccagattatgaccatcaatggaacaagtctggttggactgccc
ctctccacctgccagagtatcattaagggtctgaaggcccagtgcaggatcaagttgaac
atcgtcaggtgtccccccgtcaccatggtgctgatccgcagaccagacctcagataccag
ctgggcttcagcgtacagaatgggattatctgcagcctgatgagggggggcattgctgag
agagggggggtccgcgtcggtcatcgtatcattgagatcaacggccagagtgtggtggcc
acgccccatgagaagattgttgacatcctgtctaatgcagtgggagagatccacatgaag
actatgcctgcagccatgtaccgtctgctgactgcccaggaacagccagtctacatctga
DBGET
integrated database retrieval system
