Salvelinus sp. IW2-2015 (Arctic char): 111961759
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Entry
111961759 CDS
T05762
Name
(RefSeq) AP-3 complex subunit beta-1 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111961759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111961759
Membrane trafficking [BR:
salp04131
]
Endosome - Lysosome transport
Others
AP-3 complex
111961759
Endosome - Golgi transport
111961759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
HEAT_GCN1
SPO22
INTS1_R4
MOR2-PAG1_C
TPR_CAND1
SEEEED
Motif
Other DBs
NCBI-GeneID:
111961759
NCBI-ProteinID:
XP_023840041
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Position
LG4q.1:29:complement(27110373..27188196)
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AA seq
1134 aa
AA seq
DB search
MNGHRGFSVLRSEAAGAVRTALVSAENLQLTLKTELSQEEQHLTPHTHTNGGPDETHTKG
YCTEVPLVTCLLGNDDLKEMLESNKESLKLEAMKRVVGLIAKGKNASELFPAVVKNVASK
NIELKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPI
MMLAIKEAASDMSPYVRKTSAHAIQKLYSLDQDQKELLIEVIEKLLKDKSTLVAGSVVMA
FEEVCPDRIDLIHKNYRKLCNLLVDVEEWGQVVIISMLTRYARTQFTSPWKEDGVFDEHS
ERAFYESDEEKTRDETEAKPYMMDPDHRLLLRNTKPLLQSRNTAVVMSVAQLYWHLAPKN
EVSIVTKSLIRLLRSHREVQYIVLQNIATMSIQRKGMFEPYMKSFYVRSTDATHIKSLKL
EILTSLANEANISTILREFQTYVKSQDKQFAAGTIQAIGRCATNISEVTDTCLNGLVLLL
SNRDETVVAESVVVIRKLLQTQPTQHSDIIKHMAKLFDNITVPMARASILWLMGEYCERV
PKIAPDVLRKMAKSFTSEEDIVKLQTVNLAAKLYLTNSKQTKLLTQYILNLGKYDQNYDI
RDRTRFIRQLIVPNDKNGALSKYAHRILLAPKPAPVLKSAYKDRDRYQLGTLSHTINTKA
SGYLELSDWPAVAPDQSVRNVEVIEPVKEWAPSLGKTGKSKPAKSSDDKFYSDSGEEEKG
PGSSSSEDGSSSSSSEESGSDAESRVEKNSSQSSEESDKSSSQSEKSSSESDSDSEKKKR
KTKTPLQKKTVKPTAKDGDSDENGNVAKEANSSSAEESSSDSESDSDTHTDSDSGTEHKK
KTKSKAKPKVEVKSMKEVCLLDLGDFTPAPVTQHKSSVLSPSLLGDLEGLSLSNVSSTIQ
VRGPAFVPEKSHDLLHRMTGKGLSAQYQYPRQPCLYQPTMVSVQISLTNTTDHPLEQIHI
GDRSPTGLNIHCFNTIESLEPEASVTVFMGIDFNDSTQAANFQLCTKEDHFSVSIQPAIG
ELFLPITMTELDFRKEQGKLLGMNESSATITMAAENMTSQPISRPVATVANLGVVPSGQD
NVHRFAGKTASSGAVVLVTVELRESSTALITINTEKSVMGSMLLRDLKLALAQA
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtcaccggggtttctctgtgctgcgttctgaggcagcaggagctgtgaggaca
gctctggtgtctgctgagaacctccagctcaccttaaagactgaactcagccaggaggag
cagcacctcacaccccacacacacaccaatggaggccccgatgagacacacaccaaaggg
tactgtacagaagtacccctggtgacatgtctgttggggaatgatgaccttaaagagatg
cttgagagcaacaaggagtcacttaaactggaggccatgaagagggttgttgggctgatc
gcaaaggggaagaatgcctctgagctgttcccagcagtggtgaagaacgtggctagtaag
aatatagagctgaagaagttggtgtatgtgtacctggtgaggtatgcagaggagcagcag
gacctggctctactgtccatcagcacctttcagagagccctcaaggaccctaaccagctg
atcagagccagtgctctcagggttctgtccagtatcagagtccccatcatcgttcccatc
atgatgctggccatcaaggaggccgcctccgacatgtccccttacgtcaggaaaacatcc
gcccacgccatccagaaactctacagcctggaccaggatcagaaggaactcctgatagaa
gtcattgagaaactgctgaaggacaaaagcacattggtagcaggcagcgttgtgatggcc
tttgaggaggtgtgtccggaccgtattgacctgatccataagaactaccgtaaactctgt
aacctgctagtggacgtggaggagtggggtcaggtggtcatcatctccatgttgacacgc
tacgccaggacacagttcaccagcccctggaaagaggacggtgtgtttgatgagcacagt
gagagggcgttctatgagtctgatgaggaaaagactagagatgagacagaggctaagccc
tacatgatggaccccgaccacagactgctgctcaggaacaccaagcctctactacagagc
agaaacactgccgtggtgatgtctgtagcccagctatactggcacctggctcctaaaaac
gaggtcagcatcgtcaccaaatctctgatcagactgctcagaagccacagagaggtgcaa
tacattgtattacagaacatagccaccatgtccatccagagaaagggcatgtttgaacct
tacatgaagagtttttatgtgagatccacagatgccactcacatcaaatcactcaagctg
gagatcttgaccagcctggccaacgaagccaacatctccaccatccttagagagttccag
acctatgtgaagagccaggacaagcagtttgctgccggtaccatccaggccataggcagg
tgtgccaccaacatctctgaggtcacagacacctgcctcaatggactggtgctgctgctc
tctaacagagacgagacggtggtggcggagagcgtggtggtgatcaggaagctgctccag
acccagcccacccagcacagtgatatcatcaaacacatggccaaactctttgacaacatc
actgtgccgatggcgcgggccagcatcctgtggctgatgggagagtattgtgagagggtc
cctaagatcgcccctgatgtcctccgcaagatggccaagagcttcacctccgaggaggac
atcgtcaagctccagactgtcaacctggctgccaaactctacctcaccaactccaaacag
actaagctgttgacccagtacattctgaacctggggaaatatgaccagaactatgacatc
agagaccgcacgcgattcatccgccagctcattgtgcccaatgacaagaacggagcgctc
agcaagtacgcccaccgcattctgctggctcccaaaccagcacctgtcctcaagtctgcc
tacaaagaccgcgatcgttaccagttgggaaccctgtcccacaccatcaacaccaaagcc
agtggctacctggagctttctgattggcctgccgtggctcctgaccagtcagtgaggaat
gtggaggtgattgagccggtgaaggagtgggctccatctctagggaagactggtaaatcc
aagcctgccaagtcatcagatgacaagttctactctgactctggagaggaggagaaggga
ccagggagcagtagcagtgaggatggcagtagcagtagtagtagtgaagagtcaggcagc
gatgcagagagccgtgtcgagaagaacagcagtcagagcagtgaggagtcagacaagtcc
tccagccaatcagagaagagttccagtgaatctgactctgactctgaaaagaagaagagg
aaaactaagaccccactacagaagaagacagtcaaaccaacggccaaagacggtgattca
gatgagaatgggaacgttgctaaagaagccaacagttcgtctgcagaagagagctcctct
gattcagaatcagactctgacacccacacagactctgactcaggcaccgaacacaagaag
aagaccaagtctaaagccaaacccaaggtggaggtgaagtcaatgaaggaggtgtgtctg
ttggatctgggcgacttcactcctgcaccagtgacccagcacaagtcttctgtcctctcc
cctagcctgctaggagacctggagggcctgtcactctccaatgtctcttccaccatccag
gtgagaggtccagcgtttgtcccagagaagagccatgacctgctgcaccgtatgacaggt
aaaggtctgtcagcccagtaccagtaccccagacagccctgtctctaccagcccaccatg
gtctcagtccagatcagcctgaccaacaccacagaccaccctctggaacagatccacatt
ggagacaggagccccacaggactcaacatacactgcttcaatactatagagtctctggag
ccagaggcctcagtgactgttttcatgggcatcgacttcaacgactcaacacaagcagcc
aacttccagctgtgtacaaaggaggaccatttcagtgtgtccatccagcctgccataggg
gaactcttcctgcccatcaccatgaccgaactggacttccgcaaggagcaaggtaaactg
ctgggcatgaacgagagctcggcaaccatcaccatggcagcagagaacatgaccagccaa
ccaatcagcagaccagtggcaaccgtggccaacctgggagtggttccatccggtcaagac
aatgtccacaggtttgctggtaagacggccagtagtggagctgtggtgctggtgacggtg
gagctgagggagtcgtctacagccctgatcaccatcaacacagagaagagtgtcatgggc
tccatgctgctccgagaccttaaactggccctggcccaggcctag
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