Salvelinus sp. IW2-2015 (Arctic char): 111961920
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Entry
111961920 CDS
T05762
Symbol
lmnb1
Name
(RefSeq) lamin-B1
KO
K07611
lamin B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04210
Apoptosis
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111961920 (lmnb1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111961920 (lmnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111961920 (lmnb1)
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
111961920 (lmnb1)
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GFIT
Motif
Pfam:
Filament
LTD
CENP-F_leu_zip
Myosin_tail_1
DUF1326
Motif
Other DBs
NCBI-GeneID:
111961920
NCBI-ProteinID:
XP_023840350
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Position
LG4q.1:29:complement(35709631..35732838)
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AA seq
588 aa
AA seq
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MATATSTPAGQRISTRSAAGSTPLSPTRISRLQEKEDLCNLNDRLAIYIDKVRSLESENS
VLHLQISEKEDVRTRELTGLKSLYETELADARRSLDDTAKERARLQIELGKIKSDHEQLL
QNFAKKESDAAGAQSRLRDMETQMNSKEAVLATTLSEKRALEASLADLQGTVQELDAGLI
SAKKQLGEETLLRIDLENRYQSLSEELEFRKNMFEEEIKETRRRHETSLVEVDSGRAVEY
EFKLAQALTEMRGQHDEQVKLYKDEMENTYVAKLENVRLSSEMNSSSASMAREELRESCL
RVESLAAQMASMQKETRGWQDRIHELESALAQERDTSRRMLGEKEREIAEIRAKMQLQLD
EYEQLLDVKLALDMEINAYRKLLEGEEERLKLSPSPSSRVTVSRAQSSSRSVRTARGKRK
RVDVEEQEASSSVSIAHSASTTGPVCIDELDTDGKFIRLHNTANENQAMVGYELTRTIGE
VSATYKFTPKYVLKAGQKVTVWVSNAGVASNPPTDLVWKSQASWGTGEDVQVLLLNPQGE
EVARRSTSYKTAMEDDDDEDDEGVEVIEEDLFHQQGDPRATKRGCSIM
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgcaacttcaactccggccggccaaagaataagcacacgctcggccgccggt
agcactccattgagccccacgaggatatccaggttgcaggagaaagaagacctctgcaat
ttgaacgaccgtctagccatttatatcgacaaagtccggagtctagagtccgaaaacagc
gttcttcacttgcagatttctgagaaggaagatgtaagaacccgggagcttactggtttg
aaatcactgtatgaaaccgagctcgctgacgctagaagatctctcgatgacaccgccaaa
gaacgcgcgaggttgcagattgaattgggaaagatcaaatccgaccatgagcagttattg
cagaactttgccaagaaggagtctgatgcggctggtgcccagtcccgactcagggacatg
gagacccagatgaactcaaaggaagcggtgttggccaccacactgtcagagaagagggcc
ctggaagccagcctggctgacctgcagggaactgtccaggagttggatgctggcttgatc
tctgccaagaagcagctgggagaggagactctgcttcgcatcgacctggagaaccgttac
cagagcctgtctgaggagctggagttccgcaagaacatgttcgaggaggagatcaaggag
acacggaggagacacgagacgagtctggtggaggtggactctggccgggctgtggagtac
gagttcaaactggcccaggccctgactgagatgagggggcagcacgacgagcaggtcaaa
ctttacaaggacgagatggagaacacttacgtggccaagctggagaacgtacgcctgtcg
tcggagatgaacagctcgtcggccagcatggctcgtgaggagctccgggagtcgtgcctg
cgtgtggagagcctagccgcccagatggccagcatgcagaaagagacccgtggatggcag
gaccggatccacgagctggagtcagccctggcccaggagagggacaccagccgcaggatg
ctgggggagaaggagcgggagatcgcggagatccgggccaagatgcagctacagctggac
gagtacgagcagctgctggatgtcaaattggccttggacatggagatcaatgcctacagg
aagctactggagggagaggaggagagactgaagctgtcccccagcccgtcgtcccgtgtc
accgtctcccgtgcccagtccagctctcgcagcgtgcgtactgcccggggaaagagaaag
cgtgtggatgtggaagagcaggaggccagcagctccgtctccatcgcccactccgcctcg
accaccggcccagtgtgcattgatgagctcgacactgacgggaagttcatccgcctgcac
aacaccgccaatgagaaccaagccatggtgggctatgagctgaccaggaccatcggagaa
gtctctgccacctacaagtttactcccaaatatgtcctgaaggcaggccagaaagtcacg
gtgtgggtgtccaatgcgggtgtggcctccaacccccctacagacttggtgtggaagagc
caggcgtcctggggcacaggggaggatgtccaggtgctgctgctcaaccctcagggagag
gaggtggccaggaggagcacctcgtacaagacggccatggaggatgatgatgatgaggat
gacgagggagtggaggtcattgaggaagatctcttccaccagcagggagacccacgtgcc
accaagaggggttgctccataatgtaa
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