Salvelinus sp. IW2-2015 (Arctic char): 111961971
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Entry
111961971 CDS
T05762
Symbol
sptlc1
Name
(RefSeq) serine palmitoyltransferase 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00600
Sphingolipid metabolism
salp01100
Metabolic pathways
salp04382
Cornified envelope formation
Module
salp_M00094
Ceramide biosynthesis
salp_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
111961971 (sptlc1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111961971 (sptlc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
salp01007
]
111961971 (sptlc1)
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
111961971 (sptlc1)
Amino acid related enzymes [BR:
salp01007
]
Aminotransferase (transaminase)
Class II
111961971 (sptlc1)
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Ortholog
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Gene cluster
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Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
111961971
NCBI-ProteinID:
XP_023840456
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Position
LG4q.1:29:complement(38549922..38574350)
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AA seq
472 aa
AA seq
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MASGQQWVLVEMVQALYEAPAYHLVLEGILILWIIRLLFSKTYKLQERSDLTEKEKEDLI
EEWQPEPLVPPMSKDHPSLNYDIVTGPPSHKIIVNGKECINFASFNFLGFLDNERVKQKA
LTSLRRYGVGTCGPRGFYGTFDVHLELEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKR
GDIVFVDEAACFSIQKGLQASRSFIKYFKHNDMEDLERLLKEQEIEDHRNPRKARVTRRF
IIVEGLYINTADVCPLPDLVKLKYKYKVRIFLEESMSFGVLGEHGRGVTEHFGVNIDDIE
LISANMENAVASIGGFCCGRSFVIDHQRLSGQGYCFSVCLXPMLAAAAIEALNIMEEDPE
IFTILREKCKHVHKALQESPGMKVVGEAYAPALHLQLERSSGSRDTDVRMLRXIVDYCLE
REIALTLARYLDKEERFLPPPSIRVVVTIEQTEEEIEKAASCIKEAALAILK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggcagcagtgggtgttagtggagatggtacaagcactctacgaggcacct
gcctaccatctggtcttggaagggatcctcatattgtggatcatcagactgctgttttca
aagacgtacaaactacaggagcgttcagacctcacagagaaggaaaaggaggacttaatt
gaagaatggcaaccagaaccccttgtccctcctatgtccaaagaccatccttccctcaat
tatgacatagtcactggcccaccaagccacaaaatcattgtaaatggaaaagagtgcatt
aactttgcttcatttaacttcttgggtttccttgacaacgagcgagtgaagcaaaaggcc
ttgacttctctcaggaggtatggtgttggtacctgtggtccaagaggtttctatggaacc
tttgatgtccacttggagttagaggatcgtttggccaagttcatgaaaacagaggaggcc
atcatctattcrtatggctttgcaacgatagctagtgcaatacctgcctactccaagaga
ggagacatagtgtttgtggatgaggcagcatgtttctccatacaaaagggtctccaagcc
tcccgcagtttcatcaagtacttcaaacacaacgacatggaagatctggagagactgctc
aaagagcaggagatcgaggatcacaggaatcctcggaaggccagagtgaccaggaggttc
atcatagtggaggggctgtatataaacactgcagatgtttgtccccttccagacctggtg
aagctgaagtacaagtacaaggtccgcatcttcctggaggagagtatgtcgttcggggtg
ctgggagaacatggcagaggggttacggaacactttggggtcaacattgacgatattgar
ctcattagtgccaacatggagaacgctgtggcttccataggcggcttctgctgtggaagg
tcgttcgtcatagaccatcagcgcctttcaggccaggggtactgtttctctgtttgtctn
nnncccatgctggctgctgcagccatagaggcccttaacatcatggaggaagacccagaa
atttttaccatcctgagggagaagtgcaaacacgtrcacaaagcgttgcaagaaagtcct
gggatgaaggtagtaggggaagcttatgcccctgcgcttcacctacagctagagagaagc
tctggatccagagacacggacgtgaggatgcttcgcaycatcgtagattactgtttggag
agagagatcgcactcaccctagctcggtacttggataaagaggagcggtttctccctccg
ccttcgatccgggtagtggtcaccatcgagcagacagaagaggagattgagaaagctgcg
tcctgcatcaaagaggcagctctggctatcctcaaatga
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