KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111962030
Entry
111962030         CDS       T05762                                 
Name
(RefSeq) la-related protein 1 isoform X3
  KO
K18757  la-related protein 1
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:salp03019]
    111962030
Messenger RNA biogenesis [BR:salp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111962030
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 111962030
NCBI-ProteinID: XP_023840551
LinkDB
Position
LG4q.1:29:complement(45010961..45098298)
AA seq 1132 aa
MATQVEALLPNNPLIKPEENGHASKMIQHGEDCPEKGVKQTCVADEGSNMKTNNSEQCGI
ATKELRSKQAKEESNNQEKEILDQEKHTIDQTKDCVKCSKNEFAEAPPPKVNPWTKKKNA
VTVVSQNGQSHHEPPPTTGPAKVVKAPNPRPRRGERVGDFGDAMKWPTPGEIATKETQME
VVNRTVSCPMPVRQVREVGSTRRSPAPKKPVVKKELKEKRDTNDESKENQNAKSDDSGEE
KNGDEDSQKNSDEDSQKNGQKKKGNKHKWVPLMIEVKSEGPRERSASRNNTRQNEVPRMP
PNRKNDLRDWYRGKSEREWSNDHEVSSVRSEGAPFRAGFRGRGRGRGRGRGSRGHSDYHY
GYKAYNGKDGAYGQKFGAPVTYYYDNMSSNDLYTVDQGLLKDYVKRQIEYYFSLDNLERD
FFLRRKMDLEGFLSLGLIASFHRVQALTTDVNLIIESLKDSKEVEIIDMKIRRKVEPEKW
PLPGLSMGPDHNQVDLTQLIHCPEFVPRQMPTKQTESAPGSPRSSTPTRGMSRASMQPKV
EQDVSNLKSMPKGLSASLPDLDSESWIEVKKRPKPSPARTKTPSLQQNEDALSPVPKAGL
SLVPSTASAKEEQDEPEELDFMFDEEMEQMDGRRNTFTDWSDEDSDCEIADNDVNKILIV
TQTPPYLRKHPGGDRTGHHTSRSKLTNELVKVINDGLYYYEAGLWDDNYEPEYATIKQEV
ENFKKVHLISREEFDCLTPEPPVDPNQEVPPGPPKPQQIPVDALANKLFGAPEPSTIARS
LPTTVPDSPNYRSARTPRTPRTPHRKDPAMTPRFYPVVKESRPVDAKTPRKRKTRHSSNP
PMECHVGWVMDSREHRSRTASVSSNASPSEGTPALGGIGCTPQSLPNFQHPSHELLKENG
FTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLVVEDGK
EGYRYGLECLFRYYSYGLERKFRPNIFKDFQEETMKDYEAGQLYGLEKFWAFLKYSKNKN
MGIDPKLQECLSKFKRLEDFRIDVTPNGGGRPQETLIQRRRSPPPPLPGPQPPPQPKWLQ
PSPVRPGPHQGGCQNQQPEPATRSPGLGNRIRRPATKVTPDNPQPLGSTQRH
NT seq 3399 nt   +upstreamnt  +downstreamnt
atggctactcaggtagaggctctcctacccaacaatcctcttattaaaccagaggagaat
gggcatgcgagcaagatgatacagcatggagaggactgtcctgaaaagggtgtgaagcag
acatgtgttgccgacgagggtagcaatatgaaaacaaacaactcggaacagtgtgggatt
gcaacgaaggagctacgctctaaacaggcaaaagaagagagtaacaatcaagagaaagaa
atcctggatcaagagaagcacacgattgatcaaacgaaagactgtgtgaaatgcagtaaa
aatgagtttgctgaagcacccccgcccaaggtgaacccatggactaagaaaaagaatgcg
gtgaccgtggtcagccagaatggacaatcacatcatgagccgccacccacaacaggccca
gccaaggtggtgaaggccccaaacccccggcctcggagaggagaaagggttggagatttt
ggtgatgctatgaagtggccaaccccaggggagattgcaactaaagaaacacagatggag
gttgtgaatcggactgtgtcctgccccatgcccgtcaggcaggtcagagaagtgggctcc
acacggagatccccagcccccaagaagcctgtggtgaagaaagagttgaaggagaagcgc
gacaccaacgacgagagcaaggagaaccagaatgcgaagtcggacgactctggagaggag
aagaacggcgacgaggactctcagaagaacagtgacgaggactctcagaagaacggacag
aagaagaaaggaaacaagcataagtgggtgccgctgatgatcgaggtgaagtccgagggg
cccagagagcgctcagcctcaaggaacaacacccgtcagaacgaggtgcccaggatgccc
cccaacaggaagaacgacctcagagactggtacagagggaagtccgagcgtgaatggagt
aacgaccatgaggtgtccagtgtgaggagcgagggtgctcccttccgtgccgggttccgg
ggtcgtggcaggggccggggacgaggcagaggctccagaggtcactctgactaccattat
ggctacaaggcctacaacgggaaggacggcgcctacggacagaagtttggtgctccagtg
acctattactacgacaacatgagcagcaatgacctgtacacagtggaccaggggctgctc
aaggactatgtcaaaaggcagattgagtactacttcagccttgacaacctggagcgggat
ttcttcctgcgcaggaagatggacctggaaggcttcctgtcacttggcctgattgccagc
ttccacagggtgcaggccctcaccactgacgtcaacctcattatagagtctttgaaggac
agcaaagaggtggaaatcattgacatgaagatccgtcggaaggtggagccggagaagtgg
ccacttcctggcctgtccatgggaccggaccacaaccaggtggacctgacccagctcatc
cactgccccgagttcgtgccccggcagatgcccactaagcagacagagtctgctccaggg
tctccccggtcctccacgcccaccaggggcatgtccagggcctccatgcagcccaaggtg
gagcaggacgtgtccaacctgaagagcatgcccaagggactgtcggccagcctgcccgac
ctggactccgagtcctggatcgaggtgaagaagagacccaagccctccccggccagaacc
aagaccccttcgttgcagcagaacgaagacgctctctccccggtgcccaaggccggcctc
agcctggtcccctccaccgcctcagccaaggaggagcaggatgagcccgaggagctggac
ttcatgtttgacgaggagatggagcagatggatggccgcaggaacacatttaccgactgg
tccgatgaggactcggactgcgagatcgccgacaacgacgtcaacaagatcctcattgtg
acacagacgccgccctatctgcgcaagcacccagggggtgaccgcacgggccaccacacg
tcgcgctccaagctgaccaatgagctggtgaaggtgatcaacgacggcctgtactactac
gaagcgggcctgtgggatgacaactacgaacccgagtacgccaccatcaagcaagaggtg
gagaacttcaaaaaggttcacctgatcagccgagaggagtttgactgcctgaccccagag
ccccccgtcgaccccaaccaggaggtgccccctggacccccaaagccccagcagattccc
gtagacgccttggcgaacaaactgttcggtgcccctgagccttccacaatagcacgctcc
ctcccgactactgtacctgactcgcccaactaccgcagtgcccggacaccccgcacgcct
cgcaccccgcaccggaaggaccccgccatgacgccccgtttctaccctgttgtgaaggag
agccggcccgtcgacgccaagacccccaggaaaaggaagaccaggcacagctccaacccc
cccatggagtgccacgttggctgggtgatggactcgcgggagcaccgatctcgcaccgcc
tccgtcagctccaatgccagcccctcagagggtacacctgcgttggggggaattggctgc
accccccagtcgctccccaatttccagcacccctcccacgagttgctcaaggagaacggc
ttcacgcaacacgtttatcacaagtaccgtcgacgctgcctaaacgaacgcaagcggttg
ggcatcggccaatctcaggagatgaacacgctgttccgtttctggtcgttcttcctgagg
gatcacttcaacaggaagatgtacgaggagttcagacagctggtggtggaggacggcaag
gagggatacaggtacggtttggagtgcctgttcaggtactacagttacggactggaaagg
aaattcaggccaaacattttcaaggacttccaggaggagaccatgaaagactacgaagct
ggccagctgtatggacttgagaagttttgggcatttcttaaatactccaaaaacaagaac
atggggatcgaccccaagctgcaggagtgcttgagcaagtttaagcgtctcgaggatttc
agaatcgatgtaacccccaatggaggagggaggccgcaagagacactcatccagcggaga
cggtcgccaccgccacccctcccagggccccagccgcccccacagccaaagtggcttcag
cccagccccgttcgcccagggccccaccagggaggatgccaaaatcagcagccagagcca
gcgacccgcagcccaggcctcggcaaccgcatcagacgcccagccaccaaagtaacccca
gacaaccctcagccacttggatcaactcaacgtcattaa

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