Salvelinus sp. IW2-2015 (Arctic char): 111962079
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Entry
111962079 CDS
T05762
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04137
Mitophagy - animal
salp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111962079
04137 Mitophagy - animal
111962079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111962079
03029 Mitochondrial biogenesis [BR:
salp03029
]
111962079
Membrane trafficking [BR:
salp04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
111962079
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
111962079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
111962079
NCBI-ProteinID:
XP_023840662
LinkDB
All DBs
Position
LG4q.1:29:complement(48845232..48892499)
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AA seq
1463 aa
AA seq
DB search
MASRHQRNSVRILSSRERGSQAFGSKRLLQQLVEEKVRWMKWQSQKVELPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKTGKCLHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEV
RIWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTGSET
ERVRLVRFDPLGHNLLTATVNPSNQQNDDDSEVPMDSVEMPHFRQRSFLPSQPVRRTPIL
HNFLHILSSRSSGAQAGGDAPRPGGESSGEPPSMPLGQYPASQDRGLPFPGCTQHLGMVC
LCSRCTANRSPSLGEGPSSRPVVLPEHPQPAPHASTFSSARTEPRQPSDPGGAQQRPSAF
TTVYYSAGSSLHRAVPTAHVASPPLSQQPPPPPTSHQPPSRPLPGPDWTRSLLNMRGSES
RTGGSEGGVSGGGGMGGVGGGMLPPRTSSSSVSLLSVLRQQDGSSQSPVYTSATEGRGFP
TQSSSEPGSGPVANQRGGGGAGTSSGHHPFWDGTRSNPTSFRNVLQCNLSRYFMEFDRMQ
DLESPLGGVGGGEGGQEQTQELLNNNMDPERPRPSSSHYQPQPPPPTPAENNPPPSNAAH
SSRGQLNRCRACHNLLTFNHDSQRWERTSPASSTSAVSTQEGSSSPWQQPTSPAYEETHV
SPQRREPQPQPPERERRVTQPPEPSERQPSPGPHGAAMPFPTIASSTAQPGEQTVGLVYN
QETGQWERVYRQAASSRSTVADAPPEALSQEMPVDNPDEDSLRRRLLESSLLSLSRYDMG
GSRDHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQQNRLRTLSSSSDSPAGNP
SAAMENSDVDFEELDDNGDRTRHRTPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERG
QPGLATHSSVNRVLAGASIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVP
NCKIYNDASCDISADGQLLAVFIPSSQRGFPDEGILAVYSLAPHNLGEVLYTKRFGPNAI
SVSLSPMGCYVMVGLASRRILLHPSTDHMVAQVFRLQQPHGGETSIRMVFNVVYPMAPDQ
RRHVSINSARWLPDPGMGLAYGTNKGDLVICRPVFYRSDGESPAEASAEPIFTVNSGGGT
SRTRSTDRPGAPSRSSWRLDRDMGLMNAIGLQPRHPAPSVTSQGTQTPIVQLQNAETQTE
RDLPRPSTSHAAAYEVRQELPSTSREAKGSLEQPQTSQIEDSALGDASTEAGTSTANTGE
APEYAPGEDALARIRRLIAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRGSQTGAG
AAAKRPSSSDPILADPGSSTASPSTCPLNSLCLSLEHPPAPSEPHPGQVWGLPTLSQPQP
PGLASEGEGASLSVAMDIDDVFEGAGRMDDSEPGPSSSLLFSSSSSSRGSYPSGTGGNGN
NNNNNNNNGSNNRDSYPGDPYSR
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcgtcatcagaggaactctgtgcggatcctgtccagccgggagcgcggctca
caggcctttggctccaagcgcctcctgcagcagctggtggaggagaaggtccgctggatg
aaatggcagagtcagaaagtggagctgccagacagccctcgctcgacgttcctgttggct
ttcagcccagaccggaccctcatggcttccactcatgtcaatcacaacatctacatcaca
gaggtgaagactggaaagtgcttgcattcgctggtaggccaccgccgcacgccctggtgc
gtgacctttcaccctaccatcccaggtctggtggcctccgggtgccttgatggagaggtc
cgcatctgggacctgcatggtggcagtgagagctggttcacggaaagcaacgtggccatt
gcctcgctagccttccaccccactgcccagctcctcctcatcgccaccaataacgagctc
cacttctgggactggagccgccccgagccctttgccgtggtcaaaaccggcagcgagact
gaaagagtcaggttggtgagatttgatcctttggggcacaatcttctgactgctactgtg
aacccctccaaccagcagaatgatgatgactcagaggtccccatggacagcgtagagatg
ccccacttccgccagcgctccttcctgccctcccagcctgtacgccgcacgcccatcctc
cacaacttcctgcacatcctttcgtcacgctcctcgggagcgcaggccgggggggatgcg
ccccgccctggcggggagagcagcggcgagccccccagcatgcctttgggccagtaccca
gcctcgcaggaccgtggactgcccttcccgggctgcacccagcacctgggcatggtgtgc
ctatgcagccgctgcacagccaaccgcagcccctctctgggcgaggggccctcctccagg
cctgtggtcctccctgagcaccctcagccggccccccacgcctccaccttttcctcagcc
cgtacggagccccgacagccttcagatcccggtggggcccaacagcggccctctgccttc
actacggtctactacagcgccggcagctccctgcaccgtgccgtgcctaccgcccacgtg
gccagcccgcccctgagccagcagcctccgccaccacccaccagccaccaacccccctcc
cgcccactgcccggacccgattggacacgcagcctgctgaacatgagaggctcagagagc
aggactggagggagtgaaggtggggtgagcgggggaggtggtatgggtggtgtcgggggt
gggatgctgcccccccgaaccagctcgtcctccgtcagcctgctgtcagtgctccggcag
caggacggctcctcccagtcccctgtctacacttccgccacagagggacggggtttcccc
acgcagtcaagctctgaaccgggctctggccccgtggccaatcagcgaggtggtggaggg
gcgggcaccagcagcgggcaccaccctttctgggacggcacgcgcagcaacccgacctcg
ttccgcaacgtgctccagtgcaacctgagccgctacttcatggagtttgaccgcatgcag
gacctggagtcgccgctggggggcgtcgggggaggggagggcggccaggagcagacacag
gagctgctcaacaacaacatggacccggagagacccaggccttcctcctcccactatcag
ccccagccacccccaccaaccccagccgagaacaacccccctccctccaatgcggctcac
tcctctcggggccaactgaaccgctgccgggcctgccacaacttgctcaccttcaaccac
gactcccaacgctgggagcgcaccagcccagcctcgtccacctccgctgtctccacccag
gagggctccagctctccctggcagcagccgaccagccctgcctatgaagagacccatgtg
tcaccacagaggcgggagccccaaccccagccaccagagagggagaggagggtaacccag
cccccggagcccagcgagcggcagccctccccaggccctcatggtgcggccatgcccttc
cccaccattgcgtcgtccactgcccagcccggtgagcagacagtgggcctggtgtacaac
caggagacgggccagtgggagcgcgtctaccgccaggccgcctccagccgctccaccgtt
gccgatgcaccgccagaggccttaagccaggaaatgcctgtggataacccagacgaggac
tctctgaggaggaggctgttggagtcctccctcctctctctctcccgctatgacatggga
ggatccagagaccaccccatctacccagaccctgccaggttgtccccggctgcgtactac
gcacagagaatgatccagtacctgtcgaggcgggacagtatccgccagcgctcgctgcgc
taccagcagaaccgcctgaggaccctatcctcctcgtcggatagcccggccggcaacccc
tcggccgcaatggagaacagcgacgtggactttgaagagctagatgacaacggagacagg
acgaggcaccgaacaccacgcaacgccaggatgtctgcgccttcactggggcgattcgtt
cctcggcggtttcttttacctgagtacttgccctacgctggaatcttccatgagagggga
cagcctggcctggccacccactcctctgtcaacagggtcctagcaggtgcctcaatcggg
gacggccagtcggcggtggccagcaacatagccaacaccacctaccggctgcagtggtgg
gacttcaccaagtttgatctacctgagatcagcaacgcctctgtgaatgtgctggtgcca
aactgtaagatctacaacgatgccagctgtgacatctcggcggacgggcagctcctggca
gtgtttatacccagcagccagcggggcttccctgacgagggcatcctggctgtgtactcc
ctggcacctcacaacctgggggaggtgctctacaccaaaagatttggtcccaatgccatc
tcggtgagcctgtctccaatgggctgttacgtgatggtgggcttggcctcacgcaggatc
ctgctgcatccctccaccgaccacatggtggcgcaagtgttccggctgcagcagccccac
ggtggagagacctccatcaggatggtgttcaacgtggtctaccctatggctccggaccag
cggcggcatgtcagcatcaattcagccagatggcttccagacccggggatgggcctggcc
tacgggaccaacaaaggagacctggtcatctgcaggcccgtgttctaccgtagtgatgga
gagagcccggccgaagcaagcgcagagcccatattcacagtcaacagcggtggtggaacc
agcaggacccgcagtacagatcgaccaggggcccccagtcgctccagctggagacttgac
agagacatgggtctcatgaacgccattggcctccagccccgacaccccgccccctctgtg
acctcacagggcactcagacgcccatcgttcagctgcagaacgccgagacgcagacagag
agggacctccccaggcccagcacctcccacgctgctgcttatgaagtccgtcaagagctc
ccgtccacgagccgcgaggccaaagggagcctagagcagccacaaaccagccagatcgag
gacagtgccctgggggacgcctcgacagaagccggcacctctaccgctaacaccggtgag
gccccagagtacgccccgggagaagacgccctggcgcggatccgccggctcatcgcagag
ggcggcatgacggcggtggtccagcgggagcagagcaccaccatggcctccatgggtggg
tttggcaacaacattatcgtcagccaccgcatccaccgcggctcccagactggggcgggt
gctgcagccaagcgtcctagcagcagtgaccctattctggccgaccctggctcctctaca
gcctccccttccacctgccccctcaactccctgtgtctcagcctggagcacccccctgct
ccctcagagcctcacccaggccaggtgtggggtctgcccaccctctctcaaccacaaccc
cctggcctagcctcagagggtgagggggccagtctctcagtggccatggacatcgacgac
gtgtttgaaggagccggccgaatggacgattctgagccaggcccctcttcctccctgctc
ttctcctcctcttcttcctctcgcggctcttacccctccggcaccggcggaaatggcaac
aataacaacaacaacaacaacaacggcagtaacaacagagatagttacccaggtgaccct
tacagcaggtag
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integrated database retrieval system
