Salvelinus sp. IW2-2015 (Arctic char): 111962160
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Entry
111962160 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase eta-like
KO
K05698
receptor-type tyrosine-protein phosphatase eta [EC:
3.1.3.48
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111962160
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
salp01009
]
111962160
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
salp04090
]
111962160
Enzymes [BR:
salp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
111962160
Protein phosphatases and associated proteins [BR:
salp01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
111962160
CD molecules [BR:
salp04090
]
Proteins
111962160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Y_phosphatase
PTP_tm
Pur_ac_phosph_N
Fn3_Dep-1_3rd
Ig_ILCR1
FN3_Tor_3rd
Fn3_Dep-1_4th
PTP-SAK
Tc-R-P
MtxA_IG-like
Fn3_R-PTP-O
fn3_SORL1
Y_phosphatase3
PTPlike_phytase
PTP-NADK
DSPc
fn3_2
Motif
Other DBs
NCBI-GeneID:
111962160
NCBI-ProteinID:
XP_023840795
LinkDB
All DBs
Position
LG4q.1:29:52991787..53031885
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AA seq
1641 aa
AA seq
DB search
MNTTETSTTITGLTAGVQYSFTVTAVAGDKTTVGEGNTTTTFTNPKQPGNIVATGPGTSQ
LKVTWTLPGGSVDQYNVNISNAALSYTSSQTTQTTMASFTGLQSGRVYEVTVTAVAGQFR
NQSATGQLATVPNPPGPLNITERTTSSLSVQWKTPGLMTGAPGISYNISYHSTGTGASGQ
STSSLRHNLLSLSSGTLYTITVITVGPQDLGSAPVNTSGYTLPKPVVSLTASPLSTSSVK
LRWTDPVDVKSYYSYRVQYSNATGPVGEKTVNTSFADVPGLEPGTGYTFTVTTVAAAGSD
GISEHTFSYTKPKAVSNLVVKDLNTTAIKLSWSKQDDHKPTYSYLVTVSKRGSMVANVST
TVESYTFTHLQPGDSYTFSVVTVVQGVKSDSVETSSYTKPGVVTNIVTTGTTTTMNVTWD
APVGQVDSYTVTIYNDNVMENSHTISNDSLELVFQNLKPGKVYVVRVVTNSGPLTEASLN
VTNATYPNPPGTQMVEDQTTGSINISWARPLDMDLXQYRFSVFYLGQHNLTEHNWILLEN
LQSGTLYNITVVTVGPLDYQSTAVTTVNYTRPHSVSGLTEAGITPTDVTLVWDQPENKDG
YSFKVEVTYPNGSLFISVTVNNTKRIVTGLQSGSNYTFTVTTLTEDGTMATPVKVFYYTR
PYPISGLLAPTVNATGVRLTWTKPPQYQSGYTYRIQTEGCVSTPTNHTVTGEEAVIPELT
PGTNCTFRVSVKAQDGIEGGTVSIFQYTEPESVQPSISNNGSTNTMVVSWAAPPGNVGQY
VVHLNSTDQVFTPVWLNSNQQTHTFSYLSAGREYTAVVTTISGPFNETSGPVTTATQPNP
PGPIMILEKTTSSVTVEWGEAPLMANTTFSYLVKYLSTQLDNKTVTTTNTSQTLPSLSSG
TPYNMSVVTVGVLGFHSEEVWSSLVTTRPESVQSLSAVTAEVNLTLTWSKPVGHKPGYSY
RVTWTNSTGLIISNRTTAMENLPVNGLVPGSPYNFTVTTQTDDGTEGAPVSTSSCTNASP
VSNLKCASPNDPNAKLNLSWTKPKGLHQGFQITAKETIQLPQGQVHNKTIGDCNPACGHT
VPDLKHYTDYTLTVTTLGCGKTSTIQSLTCKTGITVPSIPADVESLVRVTSKDHNSFSVQ
LTPSLLDSTNGPIKHYGVLVTSDINNVDQSNSSQYLVKTYQDWEAGSTTAYLATVKDNTN
NSRRRKRAGNIDIYIGDKTSWKGYTNGQLKAKREYSYAIVLFTEMVVEQNGLLNVGSSLV
VITLFNSNSLYLPQDPVVTSVAVGATLGVFVILVIITAGFIIYWRRQNKKDSSDIQIHSM
SRTVVVRVEDYEAYYKKQRADSNCGFAEEFEDLKLVGTAQAKTSALAMENKSKNRYNNVL
PYDSSRVKLSIHGSPFDDYINSNYIPGYNSRKEFIAAQGPLPGTVNEFWRMIWEKNVQTL
VMLTRCNESAKVKCEEYYPSETKHFENITVTTTSEIPLEDWTIRDFDIKNVKTVEIRSVR
HFHFTAWPDHGVPETTELLINFRHLVREHMDQYSRTPPTVVHCSAGVGRTGTFIAIDRLI
FQIERESMVDVYGTIHDLRMHRPLMVQTEEQYVFLNQCAMDIIRSRTGTNVDLIYQNTAA
LTIYENVEPRKDPSKNGYHNA
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgaataccacagaaacctccactaccatcactgggctgactgctggagtgcagtacagc
ttcacagtcactgcagtggctggagataaaacaactgtaggagaaggcaatacaacaacc
acttttacaaaccctaaacaacctgggaacattgtggctacgggaccagggaccagtcag
ctgaaagtgacctggaccttgcctggagggagcgtggaccaatacaatgtgaacatctct
aatgctgctttaagctatacatccagtcaaaccacacagaccacaatggccagcttcact
gggctacagtcagggagggtctatgaggtcacagtgactgctgtagctggacaattccgt
aaccagtctgctacgggccagttagccactgtacccaacccacctggacccctcaacatc
acagagaggacaaccagctccctctctgtccaatggaaaacccctggtctaatgactggt
gcgccgggcatctcctataacattagctaccattccactgggactggagcaagcggccag
tctacctctagtctcagacataacctgctctctttgtcctctggaacgctctacaccatc
accgtgataaccgtgggaccacaggatctgggaagcgcccctgttaatacatctggatat
actttgccaaaaccagtggtgagcctcacagcgagcccgttgtccacctcctcagtgaag
ctacggtggacagaccctgtggatgttaagtcctactactcctacagagtccagtacagc
aacgctacaggccctgttggagagaaaacagtcaatacaagcttcgcggacgtccctggc
ctagaacctgggactggctataccttcactgttacaacagtagcagcagcgggaagcgay
ggaatttcagaacacacgttcagctacacaaagcccaaggcggtcagtaacctcgtggtc
aaggatctgaacacaaccgctatcaagctttcctggtccaaacaggatgaccacaaaccc
acctactcctatctggtgactgtctccaagaggggttctatggttgcgaacgtgtcaacc
acggtcgagagctacaccttcacccatctccagcctggggacagttacaccttctctgtg
gtcacggtcgtccagggggttaagtctgactcagtagagacgtctagctacacaaaacct
ggggtggtgacgaacatcgtcacaacaggaacaaccaccacaatgaatgtgacctgggat
gcccctgtgggacaggtggactcctacaccgtcacaatctacaacgacaacgtgatggaa
aacagccacaccatttccaatgactctctagaattagtgttccaaaacctgaaaccaggg
aaagtctatgttgtcagagtggtcaccaacagtggaccgctcactgaggcatcactgaat
gtaacaaatgcaacgtatcccaaccctcccggaacccagatggtggaggaccagaccact
ggttccatcaacatcagctgggcccggcccctggacatggacctggrtcagtaccggttc
tctgtgttctacctgggccagcataacctgacagaacacaactggatcctcctggagaac
ctccagtctggaacactctacaacatcactgtggtaaccgtagggccgttggactaccag
agcacagcggtgacgacagtcaactataccaggccccactctgtgagcgggctgacagag
gcaggaatcacccctaccgatgtgactctagtctgggatcagccggagaacaaagatggc
tactccttcaaggtggaggtaacctaccccaacgggtcccttttcatctccgtcactgtc
aacaacaccaaaagaattgtcaccggactacagtcggggagcaactacacctttaccgtg
acaacgctcacagaggatggcaccatggcaacccctgtgaaagtgttctattacacaaga
ccatatcccattagtgggttgttggcgcctacagtaaacgcaactggtgtacgtctgacc
tggaccaagccacctcagtaccagagtggttacacataccgtatccagaccgaggggtgc
gtgtctactcccacaaaccacacagtgacaggagaggaggccgtcattccagaactcaca
ccaggaaccaattgcaccttccgtgtttccgtcaaggcacaggacggtatagagggaggc
accgtctcaatctttcagtacacagagcctgagtctgtccagccatccatctccaacaac
ggtagcaccaataccatggtggtgagctgggcggcaccaccagggaatgtggggcagtat
gtggtccatctgaacagcactgaccaggtctttacccccgtatggctgaactccaaccag
cagacacacaccttcagttacctgtcagctgggagagagtacacagccgtggtgaccact
atcagtggtcccttcaatgaaacatcaggacctgtaactacagcaactcaacccaacccg
cctgggcccatcatgatcttggagaagactactagttccgtcactgtggagtggggtgaa
gctcctctgatggccaacaccaccttcagttacctggtgaagtacctgtcgacgcagcta
gacaacaagacggtcactactacaaacacaagtcaaacactgcccagcctgtcctctgga
acaccctacaatatgtctgtggttacagtgggagtgctaggcttccacagtgaggaggtc
tggagcagtttggtcacaaccagaccagagagtgtccagtcactgagtgcagtgacggcc
gaggtgaacctaacattgacctggtcaaagcctgtaggtcacaaaccaggctacagctac
agagtgacctggaccaactccactgggttaatcatcagtaatagaaccacagctatggaa
aacctgcccgtcaatggattggtccctgggagtccgtataacttcaccgtaacaacacag
accgatgacggaacagagggagctccagtctccacctccagctgcaccaatgccagccct
gtgtccaacttgaagtgtgcctctcctaatgaccccaacgccaagctgaatctgtcctgg
accaaacccaaaggactgcaccagggctttcagatcactgctaaggaaaccatccaactc
cctcagggccaggtacacaataagacaattggtgactgtaacccagcctgtggtcacaca
gtccctgacctgaagcactatacagactacaccctgaccgtgaccactctgggctgtggg
aaaaccagcaccatccaaagcctcacctgcaagactggcattactgtcccttctatccca
gctgacgttgagtccctagtcagggtcacatcgaaggatcacaactccttctctgtacag
ctgacccccagcctcctggacagcaccaatggaccaatcaaacactacggcgtgttggtg
acctcagacatcaacaatgtagatcagtctaactcatcgcagtacttagtgaagacttat
caggactgggaagcaggctctactactgcatacctggctacggtcaaagacaacactaac
aacagccggaggaggaaacgtgcaggaaacattgacatttacataggggacaaaacctca
tggaagggctataccaatggccaactgaaggccaaacgagagtacagttatgccattgtt
ttattcactgaaatggtggtagagcagaatgggcttctgaacgtcggttcgtcactcgtc
gtgataactctgtttaactcaaattcattgtacctccctcaggacccagtggtcaccagt
gtggctgtcggggcaacgcttggagtttttgtcatcctcgtcatcattactgccggcttc
atcatctactggaggagacaaaacaagaaggactcttcagacatccagattcactctatg
agcagaaccgttgttgtgagggtggaggactatgaggcttattacaagaagcagagagca
gactccaactgtggtttcgctgaggagtttgaggacctgaagctagtgggaacagcccaa
gcaaaaaccagcgctttggccatggagaacaagtctaagaaccgctacaacaatgtgctt
ccctatgattcctctagagtgaaactgtccatccatggaagtccatttgacgactacatc
aattctaactacatcccgggttacaactccaggaaggagtttattgcggcccagggtcct
ttgcccggcactgtcaacgagttctggaggatgatctgggagaagaacgtccagactctg
gtcatgctgacacgctgtaacgaatccgctaaggtcaaatgtgaggaatactatccatct
gagaccaagcactttgagaatatcaccgtgacaaccacctctgagatccccctagaagac
tggaccatcagggactttgacataaaaaatgtgaagacggttgagatacgctcagtacgt
cacttccacttcacagcctggccagaccacggcgtccccgagaccaccgagctgctcatc
aacttcagacacctggtccgagaacacatggaccagtactcacgcactccgcccaccgtc
gtccactgcagtgcgggtgtaggccgtacaggcaccttcatagccatcgaccggctgatc
ttccagatagagagggagagtatggtggacgtgtacggcaccatccacgacctgcgcatg
caccggcccctcatggtgcagacagaggagcagtatgtgttcctaaaccagtgtgccatg
gacatcatccgatccagaactggaaccaacgtggatttaatctaccagaacacggctgcg
ctcaccatctacgagaacgtagaacccaggaaggatccatctaagaatggctaccacaac
gcgtag
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integrated database retrieval system
