Salvelinus sp. IW2-2015 (Arctic char): 111962176
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Entry
111962176 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase zeta-like
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
salp01009
]
111962176
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
salp00535
]
111962176
Enzymes [BR:
salp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
111962176
Protein phosphatases and associated proteins [BR:
salp01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
111962176
Proteoglycans [BR:
salp00535
]
Cell surface proteoglycans
Others
111962176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
DSPc
PTPlike_phytase
PTP-NADK
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
111962176
NCBI-ProteinID:
XP_023840821
LinkDB
All DBs
Position
LG4q.1:29:complement(55310799..55382754)
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AA seq
1826 aa
AA seq
DB search
METAVSRGLLLAQLLIVCQLAELVQGYGYRAQRKFSEDIDWSYAGTLNQNNWAKKYPSCN
NARQSPINIEEELTQVKVQFQKLKFEGWEEAMSDGATIKNDGKTVAVNPEGDFYVSGGGL
RGRFKVGRITFHWGRCNASSEGSEHSLNGVKYPLEMQIYCYEVHRFESLDQAIKDGGRIT
ALSVLFEVGTSIEDNDNYIAIIDGINRVSRFGGSFSLRGLLPNYSTEKYFIYNGSLTTPT
CTEDRGSGRLKNTGAISATRWLEMFCEVMTMQQAGYVMLMDYLQNNYREQQQQFMGQAFS
SYTGTEEVLTPICSSEPENVQADPHNLTSLLVMWERPRAVYDAGIEKYSVTYKLAQGEDP
PAFEYLTDGDQDVGAILQDLMSNTSYVVQVMAVCTNGLYGRVSEQLTVDMPIDNPEDTPD
PDSTGFAEEEDYGPRVEPGEDQDNDMDWTTPSSTRTRPKTTTGLPSLPLPGFRTTTPSVQ
RRTTTPGSPFKTTQPNRSHTSTAPSVRYRTTTRAPAEGAISPGSRGSGSTQKYTTTATMP
LSRTDDVTTSSTRKEKGRGVAPPVTVPSGKGSGVSMAIPLPESWTVATSSPSLFQGVPPQ
PTSPSMPLFSSTASSFGSVLSQTTQPVFNGEILPSTLPVCDTSTPGYPGSAPSNAPTACL
HAPPSSRPVSSVTPPARDSPHAATALLSSGDSFLAPSSPSSPTLSLLPHPSHPLSGWETV
VSRGVGDEGDDDSGDGDVLSGSSSMASGDPALFSDTPPLQTLPDSPVERDLSELASRPLP
AASLSLQPSLLLSRDFSLSGATPGITDYVYGRLGDSSYATSGVIESSLSWVVDGGGGFTV
ASNGVESLCTCSLDGTSSSSWLHASPHLPLPTSDWGAASLALYSSGSDLDHLIHTSLAGS
TNPSVGQPLFSSSSSPPVPPHPPLSGSHGDLHVSVTATPSRSKDRWVSALRTSASAPSSS
SSPVTPTLTPDLQTVDSNVSGSTLSGEAQEELDAEWDRIQSSASASASGEGMLPYIPTAP
PSFTSEVAASPDSDNDERSSAFYFESESGSAVATETAGSTATVSAVTAAVPWPLGGEEQS
GSGQGESPYDNEMSSDFSIPERTERDSEEEEPIADASNSSHESRVGLARDKERRAVVPLA
VVSTLTFVGLIILVGILIYWRKCFQTAHFYIEDNTSPRVISVPPTPLLTATDEHEALTVK
QFVKHVTELHHSNTFSREFEILKECYEEVQVCTVDLGITTDGSNHPDNKNKNRYINILAY
DHSRVRLSTQADKDGKSGDYINANYVDGFNKSRAYIAAQGPLKSSTEDFWRMVWEQNVGV
IIMITNLVEKGRRKCDQYWPLESQDEYGGFLVTVKSSKVLAHYTERTFTLRNTKVQKGSL
KGRINERTVTQYHYTQWPDMGVPEYTLPVLTFVQTSSKARTDDMGPVVVHCSAGVGRTGT
YIVLDSMLKQIKEESTVNIMGFLKHIRTQRNHLVQTEEQYVFIHDALVEAILGKETEVSS
SLIHSYVNDLLTPGPSGRTQLEKQFKLVSQSNAKQCDYSAALKECNREKNRNSSLIPVER
SRVCLSTVVGETTSDYINASYLTGYRQSTEFIVTQNPLASTVTDFWRMIWDHNAQVIVTL
PGTPGTAGTLGTPSLAEGEEPYVYWPRKEQPISCEAFTVTLRSENHVCLVNEEMLVVQDY
VLEATQDDYVLEVRHYRTPRWPNPDSPISSTFELLSLVREESSSKEGPMVVHDEIGGVTA
GTFCALSTLVCQLELESSVDVYQVAKMINLMRPGTFTDVEQYQFLYKAMLSLVGTQEDER
TLQSSDNNGTVPGGPVSTAESLESLV
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggctgtttcaagaggcttattgctcgctcagctcttgatcgtctgtcaatta
gctgaactggtgcaaggatacggataccgggcccagcgtaaattctcagaagacatcgac
tggtcctatgcggggactctcaaccaaaacaactgggccaagaagtacccatcatgtaac
aatgccagacagtcacccatcaacatcgaggaggagctgacacaggtcaaagttcagttc
caaaagctgaagttcgagggctgggaggaagcgatgtctgatggggccaccatcaagaac
gacggcaagacagtggcggtgaacccagagggagacttctatgtgagtggaggggggctg
aggggcaggtttaaggtgggaagaatcaccttccactggggacgctgcaacgcctcctca
gagggctccgaacacagcctcaacggggtgaagtaccccctggagatgcagatctactgt
tatgaagtgcatcgctttgagtccttagaccaggccatcaaggacgggggcaggatcaca
gctctctctgtgctgtttgaggtgggcacgagcatcgaagacaatgacaactacatagcc
attatcgacggaatcaaccgtgtcagccgattcggtgggtccttctctctccggggcctc
ctgcccaactactccacagagaagtacttcatctacaacggctccctcaccacacccacc
tgcactgaagaccgtgggagtggtcgtctcaagaacactggggccatctccgccacgagg
tggctggagatgttctgtgaggtgatgaccatgcagcaggcgggctacgtgatgctgatg
gactacctgcagaacaactacagagagcagcagcagcagttcatgggccaggccttctcc
tcttacaccggcacagaggaggtcctcactcccatctgcagttcagagccggagaacgtg
caggcagacccccataacctgaccagcctgctggtgatgtgggagcggccacgggcggtg
tacgacgccgggatagagaagtactcagttacctacaagctggcccagggagaggaccct
ccagcctttgagtacctgacggacggagaccaggatgtgggggccatattgcaggacctg
atgtccaacaccagctacgtggttcaggtcatggcggtctgcaccaacggtctgtacggc
cgcgtgagcgagcagctgactgtcgacatgccgatcgacaaccccgaggacacccctgat
ccagattctactggatttgcagaggaagaggactatggaccccgggttgaaccgggtgaa
gaccaggacaatgacatggactggaccaccccaagctctacgaggaccaggcccaaaaca
accactggcctaccaagcctccccttgcctggtttcagaacaaccaccccttctgtccag
aggagaaccaccactccagggtctcctttcaagaccactcagcccaaccgatcccatacg
tccacggcgccgagtgtaaggtaccgcaccacgaccagagctccagcagagggggccatc
tcaccaggcagcagagggagcgggagtacccagaagtataccacaacagcaaccatgccg
ctgtctcgcactgatgacgtcaccacttcctcaaccagaaaggagaagggcagaggggtg
gcgccccccgtgaccgtcccaagcggcaaaggcagcggtgtttccatggccatccctctc
ccggaaagctggaccgtggccacctcttccccctccctttttcagggggtaccaccacag
cctacaagtcccagcatgcccttgttttcgtccactgcctcctccttcggcagcgttctc
tcgcagaccacgcagccggtgttcaacggtgagatcctcccctccacccttcctgtatgt
gacacgtcgacccctggttaccccggctccgcccctagcaacgcccccaccgcctgcctg
catgcccctccttcgtctagacctgtgtcgtctgtgacccctcctgctcgggactccccg
catgctgctacagcactgttgtctagtggtgactcattcctcgctccctcctccccctcc
tcccccaccctgtctctcctccctcacccctcacaccccctgtctggttgggagaccgta
gtctctcgtggtgttggcgatgaaggcgatgatgatagtggtgatggcgatgtgctgtct
ggttcttcgtccatggcctcgggtgaccctgcactatttagtgacactcccccccttcaa
actctccctgactcgcccgttgagcgggacctgtctgagctagcctctagaccgctccct
gcagcctctctctccctgcagccttctcttctcctctctcgtgacttctctctgtccggg
gccaccccgggaatcactgactatgtctatggcaggctgggggactctagttatgctacg
agcggtgtaatagagtcttctctgtcgtgggttgttgatggtggcggagggttcacagta
gctagcaatggtgtggagtcgttgtgtacctgctctctggatggcacctcgtcctcttcc
tggttgcatgcctctcctcacctccccctgcccacgtctgactggggggcggctagccta
gcactctactcctccggtagcgacttagaccatctcatccatacatctctggcgggctcc
accaacccgtctgtaggtcagcctctcttctcttcctcctcctctcctcctgttcctcct
catcctcctctctccggttcccatggtgacctgcacgtttctgttacagccacgccgtcc
cgctccaaggaccgctgggtctcggccctccgaacctctgcctccgccccctcctcctct
tcctcccccgtcacccccaccctcacccctgacctgcagacggtagacagtaatgtgtct
ggctcgaccctgtcgggagaagcccaggaggagctagatgcagagtgggacaggattcag
agttcagcctcagcctcggcctcaggggagggaatgctcccttacatccccaccgccccc
ccctcattcacctctgaggttgccgcctctcccgattccgacaatgatgaacgctcctct
gcgttttactttgagagtgagagtggcagtgctgtcgccacggagacggcggggagcacg
gcaacagtatctgcggtaactgcggcggtgccctggccgctaggtggggaggagcagagt
ggctcgggacagggcgagagcccatacgacaacgagatgtcctcagacttcagtatcccc
gagcgcacagagagagactctgaggaggaggagccaatcgcagacgccagtaacagcagc
catgagtccagggtgggtctggccagggataaggagaggagggccgtggtccctctggcg
gtggtctccaccctcaccttcgtgggactcatcatcctggtgggcatcctcatctactgg
agaaagtgtttccagactgcccatttctacatagaggacaacacatcgcccagagtcata
tctgttccacccacaccattgcttacagctacagatgaacatgaagcccttacggtgaag
cagtttgtcaagcacgtgacagagctccaccacagcaacacattctcccgggagtttgag
atattgaaagagtgttacgaggaggtgcaggtgtgcacggtggacctgggtatcaccaca
gacggctccaaccatccagacaacaagaacaagaaccgatacatcaatatcctggcctat
gaccacagccgagtaagactctcaacccaggctgacaaagatgggaagagtggagattac
attaacgcaaactacgttgacggtttcaacaagtccagggcctacatcgcggcccagggc
cctctcaagtccagcaccgaggacttctggaggatggtgtgggagcagaacgtgggcgtc
atcatcatgattaccaacctggtggagaagggacggaggaagtgtgaccagtactggccc
ctggagagccaggatgagtacggtggtttcctggtgacggtgaagagcagcaaggttctg
gcccactacaccgagagaaccttcaccctcaggaacaccaaggtccaaaagggttcactg
aaggggcgtattaacgagcggaccgtgacacagtaccactacacccagtggccagacatg
ggcgtgcctgagtacactctccccgtgctcaccttcgtccagacgtcctccaaagccagg
acagatgacatggggcctgtcgtagtgcactgcagtgcgggcgtaggcaggactggcacc
tacatagtgttggatagcatgctgaagcagatcaaagaagagagcacggtcaacatcatg
ggtttcctcaaacacatccgcacacagaggaaccacctggtacagacagaggagcagtat
gtgttcatccacgacgccctggtggaggccatcttgggcaaggagacggaggtttcctcc
agcctcatccacagctacgtcaatgacctcctgaccccagggccctccggcaggacgcag
ctggagaaacagtttaagctggtatcccagtccaatgccaaacagtgtgactactcggca
gccctgaaagagtgcaacagagagaagaacagaaactcctctttaatacccgttgaaagg
tcacgggtgtgtctgtctacggtggtgggagaaactacatcagattacatcaacgcctca
tacctcacggggtaccggcagagcactgagttcatcgtgacccagaacccactggccagc
acggtgacagacttctggaggatgatctgggatcacaacgctcaggtcatcgtcacactg
ccgggaacaccaggaacagcgggaacactgggaacaccaagcctggcagagggggaggag
ccgtacgtgtactggccccgcaaggagcagccaatcagctgtgaggcgttcacagtgacc
ctgcggagcgagaaccatgtgtgtctggtcaacgaggagatgctggtggtgcaggactat
gtcctggaggctacacaggatgactatgttctggaggtgaggcactaccggacgcctcgc
tggcccaacccagacagccccatcagcagcacctttgagctgctcagcctggtgagggag
gagagctcctccaaggagggccccatggttgtccatgacgagattggcggtgttactgcg
ggaaccttctgtgccctgtctactctggtgtgccaactagagttggagagctctgtggac
gtgtaccaggtggccaagatgatcaacctcatgaggcccgggaccttcactgatgttgag
cagtaccagttcctgtacaaagccatgctgagcttggttggcacacaggaggacgagagg
acgctccagtcctctgacaacaacggaacggtcccagggggccctgtcagcacagccgag
agccttgagtccctggtgtaa
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integrated database retrieval system
