Salvelinus sp. IW2-2015 (Arctic char): 111962190
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Entry
111962190 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04260
Cardiac muscle contraction
salp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111962190
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
111962190
04261 Adrenergic signaling in cardiomyocytes
111962190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111962190
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111962190
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA_3
VWA
MCP-like_PDC_1
VWA_2
VWA_CoxE
dCache_2
CobT_C
Motif
Other DBs
NCBI-GeneID:
111962190
NCBI-ProteinID:
XP_024002815
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Position
LG1:23583366..23644273
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AA seq
1034 aa
AA seq
DB search
MLWNRRILFSHVCCASFLLFWIMLGTVVEVMGSQPGIPLSVVKLWASAFGGEIKSISAKY
SGSQLLQKKYKEFEKSVRVEEIDGMKVVKTLAKKMEEMFRMKKEAMRRLVEAAEEAHLQH
EEDPELQYEYFNAVLINEVDEEGNNVELGGEFVLEPNDHFNNLSVNLSLSVVQVPTNMYN
KDPAIVNGVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGVKWHPDEHGVIAFD
CRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAHFKE
HLDKLFAKGIGLLGDALTEAFTILNDFNQTGHGSVCSQAIMLVTDGATQMYDDVFAKFNW
PDRKVRIFPYLIGRESAFADNMKWMACANKGYFSQISTLADVQENVMRYLHVMSRPKVID
HEHDTVWTEAYVDSTLSQAHKSRNKKGPSLMTTVAMPVFSTKNETKNQGILLGVVGTDIP
LQELMKIIPKHLLGIHGYAFAITNNGYILTHPDLRPLYQEGQKRRKPNYSSVDLSEVEWE
DKDDFLRNAMVNRKTGTFSMEVKKTVDKGKRLLKMHNDYFYTEVKGTPFSVGVALSRGHG
KFFFRGNVSVEAGLLDLEQPDVALADEWTYCNTDEHHEHRSLSQIQAIKLYLTGRKPHIK
CDRELIQEVLFDAVVTAPLEAYWTGLALNKSENSDKGVEIAYLGTRTGLSRTSLFVVPEH
LSNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTFVYSIPFGGNENKSVVWPALPYNCW
MTGSRLLLLRWIQMKLEFFXRKFWTASRQCAALDGKCSIAVIMSGLFFGEVESAVMNKLL
LMGPSKITLYDYQALCREYAGSSDSARSLSHPFSIVKWLLTKLVIFLLEFNLYSWWHVDL
SVKAQRSRGKTMMVPCDTEYPAFVSERTIKETTGNIDCEGCARSFVIQQIPSVILXWLSD
NKCDCSSATLVSMDPIEIMYNESLKCDRLKFQKDRKRPESCHPFQPEENAMECERAQALC
PPYSSTAPPTGHSH
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggaatcggaggatcctcttttcacacgtgtgctgcgccagcttccttctgttc
tggattatgctgggcacggtggtagaggtgatggggtcccagccggggattcctctctca
gtggtgaagttatgggcctcggcgtttggtggagaaattaaatcaatttctgcaaaatac
tctggatcccagctgctgcagaagaaatataaagaatttgagaartccgtccgagtggaa
gaaattgatggcatgaaagtggtcaaaactctagcaaagaagatggaggaaatgttccgg
atgaaaaaggaggccatgcggcggctggtggaggcagcagaggaggcccatctacagcac
gaggaggacccagagctgcagtatgagtactttaacgcggtgctgatcaacgaggtggat
gaggagggcaacaacgtggagctgggaggagagttcgttctggaacccaacgaccacttc
aacaacctgtcagtcaacctcagcctcagtgtggtgcaggtgcccaccaacatgtacaac
aaagatccagccatagtgaatggggtgtattggtcagaggccttgaataaagtgtttgtg
gataactttgaaaaagatccgtccctgatatggcagtactttggcagtgccaagggcttc
tttaggcagtatcccggggtcaaatggcatccagacgaacacggggtcatcgccttcgac
tgcaggaacaggaaatggtacatccaggcagcgacgtctcctaaagacgtggtgatcctg
gtggacgtgagtggcagtatgaagggcctgagactgaccatcgccagacagactgtctcc
tctatactggacacactgggagacgacgacttcttcaacatcatcgctcatttcaaagaa
cacctggacaagctgttcgccaaagggattggtctgctgggtgacgctctgaccgaagcg
ttcaccattctaaatgattttaaccagactgggcatggcagtgtgtgtagccaggctatc
atgctggtgactgacggggcaacgcagatgtacgacgacgtcttcgccaagttcaattgg
ccagacagaaaggtacgcatattcccttacctgattggccgagagtctgcctttgctgat
aacatgaaatggatggcctgtgctaataaagggtatttcagtcagatctccacactggct
gatgtacaggaaaatgtgatgaggtatcttcatgttatgagtcgtcctaaagtcatcgac
cacgagcatgacacggtctggacagaggcctacgtggacagcactctctcccaggcacac
aagtccagaaacaagaagggccctagcctgatgaccactgttgccatgcctgtgttcagc
accaagaacgagacgaagaaccagggtattctcctaggggtggtgggcacagacattcct
cttcaggaactcatgaagatcatccctaaacacctgctgggtatccacggttacgccttt
gccatcacaaacaacggctacatcctgacccatccggacctgaggccactgtaccaggag
ggccagaagaggaggaaacccaactacagcagtgtggacctttcagaagtggagtgggag
gacaaggatgactttctgcgtaatgccatggtcaacaggaagactgggacattctccatg
gaggtgaagaagacagtggacaaagggaaaagactcctgaagatgcacaatgactatttc
tacactgaagtcaagggaactcccttcagtgtcggagtggctttgtctagaggccatgga
aaattcttcttcagaggaaacgtctcagtggaagcagggctccttgacctggaacagcca
gatgttgcgctggcagatgaatggacgtattgtaacacagatgagcaccatgagcaccgc
tccctctcccagatccaggccattaaactctacctgaccggacgcaagccacacatcaaa
tgtgacagagagctgatccaggaggtgttgtttgatgctgtggtcacagccccactggag
gcctactggaccggcctggccctcaacaagtccgagaactcagacaaaggagtggagatt
gcttacctaggcacacgcactggcctctctagaaccagcctgtttgttgtcccagagcac
ctatccaatcaagacttcctgacggcggaggataaggagggggtgttcaacgctgaccac
ttccctctgtggtacaagagagcagcagagcaggttcccggcaccttcgtctactcgatc
ccctttggaggaaatgagaataagagtgtggtttggccagcactgccatacaactgctgg
atgacaggaagtcgcctattgttgcttcgttggattcagatgaagctggaattctttncg
aggaagttctggaccgctagtagacagtgtgctgctctggatgggaagtgctccattgct
gtgataatgagcgggctgttctttggagaggtggagagtgctgttatgaacaagctgctt
ctcatgggtccttcaaaaatcactctgtatgactaccaggctctctgtagagagtatgct
ggcagcagtgacagcgcacgctctctatcacatcccttctccatcgtgaaatggctcctg
accaaacttgtcattttcctgctggagttcaacctttacagctggtggcatgttgatctc
tcagtcaaagcccaaaggtcaaggggaaagaccatgatggtgccatgtgacacagagtac
cctgccttcgtctctgagcgtaccatcaaagagaccacgggaaacatcgactgtgagggc
tgtgccagatcttttgtaattcagcagattcccagcgtaattcttnaatggttgtcggac
aacaagtgtgactgcagctctgcaaccctggtttccatggatcccatcgagattatgtac
aatgagtctctgaaatgtgataggctgaagtttcagaaagacagaaagcggccagaatcg
tgtcatccttttcaacctgaggagaatgccatggagtgtgagagggcgcaggctctctgc
cccccttacagcagcactgctccccctactggccactctcattag
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