Salvelinus sp. IW2-2015 (Arctic char): 111962231
Help
Entry
111962231 CDS
T05762
Name
(RefSeq) eukaryotic translation initiation factor 4B isoform X1
KO
K03258
translation initiation factor 4B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
111962231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111962231
03012 Translation factors [BR:
salp03012
]
111962231
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111962231
mRNA cycle factors
Stress granule specific factors
111962231
Translation factors [BR:
salp03012
]
Eukaryotic type
Initiation factors
eIF-4
111962231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
111962231
NCBI-ProteinID:
XP_023840931
LinkDB
All DBs
Position
LG1:complement(19951221..19985541)
Genome browser
AA seq
559 aa
AA seq
DB search
MAAAAKKKGNKKGKTLTLTDFLAEDSGSGGNAPPPQPSYAKSTSWADETDDMEGDVSTSW
HTGEDSYRAPAIDRNILPTAPRSSREPDVDRSRLPRSPPYTAFLGNLPYDVSEESIKDFF
RGLAISAVRLPREPSNPERQKGFGYAEFDDVDSLLRALTLNEENLGNRRIRVDIADQSND
KEGRDNGQMGGRDRMGRMGDMAGPDKTDSDDWRARPAADADDGPPKREESAFGSRDRYGD
RDGLRRDNDRGFGGDRDRGFGGRDRYDDRGGENGAFGSRRDRDDGGRRAFGSGYRRDDDF
QSGGGGGSRYGARDRYGGDREGRYERQDEGREERGEGGPTERPKLVLKPRGMAEEQQAGS
GGAPPAAPAAARSSGRASIFGAAKPVDTAAKEREVEEKLQRQLEEDKSKGFDRKPRDRDR
DPSWRNEEPPSERSRTGSESSHPGSTSGGRASRRRESERSVENEVFSGKEDDPPSPGSRP
SSANSSTFSSKEPLKVMPAPPPKENAWVKRPALSTGSSEGCAPISTSDTAPPKLRSEHVL
IRLLYCIASLENEVANYVS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagctaagaaaaagggcaataagaaggggaagactctgaccctcactgac
ttcctcgcagaggacagtgggagtgggggcaacgctccaccaccgcaacccagctacgcc
aagtccaccagctgggctgatgagaccgatgacatggaaggagatgtgtccacctcctgg
cacacaggggaggacagttaccgggcccccgcaatagaccgtaacatcctgcccacagct
ccacggtcgtcccgtgagcccgatgtggaccgctcacgcctcccccgtagccccccctac
actgccttcctgggcaacctgccttacgacgtctcagaggaatctatcaaggacttcttc
cggggcctagcgatcagtgcggtgcgcttgccacgggagcccagtaacccagagaggcag
aagggctttggctacgcagagtttgacgacgtggactccctcttgagggcgctgactctc
aacgaggagaacctgggaaaccgcaggatccgggtggatattgcagatcagtccaacgac
aaagaggggagagacaatggtcagatgggtggacgagaccggatgggccgcatgggagac
atggcaggccccgacaagacagacagtgatgactggagggcccggcctgctgcagacgcc
gacgatggacccccaaagagagaggaatccgcctttgggtcacgcgaccgctacggagac
cgtgacgggctgcgaagggacaacgaccgcggcttcggcggcgaccgggaccgcggcttt
ggcggcagagaccgctatgacgaccggggaggtgagaacggagcctttggctctcgcagg
gatagggatgacggcgggcgacgtgccttcggcagtgggtaccgccgtgacgatgacttt
cagagtggcggaggtggtggtagccgctatggggcccgggatcgctatggcggagaccgg
gagggccggtacgagaggcaggacgaagggcgtgaggagagaggtgagggtggtccaacc
gagaggcccaagttggtcctgaagccgcgcggcatggccgaggagcagcaggccggcagc
ggtggggctcccccagctgctccggcagccgcccgcagctctggtcgagcctccatcttc
ggagcggccaagcccgtggacacagcggctaaggagcgggaggtggaggagaagctccag
aggcagctggaagaggacaagtccaagggcttcgataggaaacctcgcgacagagacagg
gacccaagctggaggaatgaggagccaccttctgagcgttcccgcacaggaagtgagtca
tcacatccaggaagtacctctggagggagagcctcacggcgcagagagagcgagcgctca
gtggagaacgaagtattcagtggtaaggaggacgaccctccctctcccgggtctcgcccc
tcttccgccaactcttccaccttctcctccaaggagcccctcaaggtgatgcctgcaccg
ccacctaaggagaatgcctgggtcaagcggcctgcgttgagtaccgggtccagcgaggga
tgcgccccratctccaccagtgacacggcacctcccaaactgaggtcagaacatgttctt
atacgtcttctatattgtatagcatctctggagaatgaagtggccaattatgtctcatag
DBGET
integrated database retrieval system
