Salvelinus sp. IW2-2015 (Arctic char): 111962428
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Entry
111962428 CDS
T05762
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1 isoform X1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111962428
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111962428
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
IQ
MYO6_lever
DUF641
Motif
Other DBs
NCBI-GeneID:
111962428
NCBI-ProteinID:
XP_023841279
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Position
LG4q.1:29:complement(68743421..68787084)
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AA seq
1259 aa
AA seq
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MQKAIRLNDGHVTYLGLLAKKDGTRRGCLSKRSSDNTKWHTKWFALFQNMLFYFESESSS
RPAGLYLLEGCVCDRAPSPKPSQSSKECLEKQYYFTVNFTHENQKALELRTEDVKDGDEW
VAAITHASYRNLATEHETLMQKYLHLIQIVETEKTVAKQLRQQIEDGEIEIERLKSEISG
LHKDNGKIQSSPTAEPSEDDDSELKKIKKVQSFLRGWMCRRKWKTIIQDYIRSPHAESMR
KRNQVVFSMLDSEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFL
HQIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKL
LKQYEAKPDCEDRTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERTSLDYAKSKLEEL
SRIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRGRL
GSLSLKKEGERQCFLFSKHVIICTRGSGGKLHLTKNGVVSLIDCTLLEDPEGTDDESKPD
KGVQDMEHLDFKIVVEPKEGQSFTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFE
ENSKVTVPQMIKSDASLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDF
LNTFLHSYRVFTSANVVLDKLITIYKKPISAIPARSLELFFASSQNNKLLYGEPPKSPRA
SRKFSSPPPLAITKTSSPNRRRKLSLNIPIITGGKALELAALSCSSNGYASMYSSMSPFS
KTTLDINKLYVTSPITSKIPDEGEGKTDKAEETIVSKQDISVPEESDIDQNQSDDADPET
SPIKSPTTPKNMKCKNSSEFSLFSYNNGTVMSSCRPEMDNNNRSALSAASAFAIATAGAN
EGTPTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFESNTE
LKLKVIAFLEEVMHDPELLTQERKAAANIIRTLTQEDPGDNQISLEEVTQLASVGKAEAF
ESHSALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNERTPYIMKTTKHFNDISNLIA
TEILRCDDVTTRVAVMEKWVAVADICRCLHNYNAVLEITSSLNRSSVFRLKKTWLKVSKQ
TKTVIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDKLVN
FSKMRMISHIIRDIRQFQQTAYKIDHQPMAAQYLLDNSSVLDEESLYEASLRIEPKVNN
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggcaatacgactgaatgatggtcatgtcacctacctgggtcttttggcaaag
aaggatggtacgaggcgaggttgcttgagcaaaaggagctcagacaacacaaaatggcac
acaaagtggttcgctttattccaaaatatgctgttttattttgagagcgagtccagctct
cgacctgcgggattatacctgttggagggatgtgtgtgtgacagggcgccgtcacctaaa
ccttcacaatcatccaaagagtgtttagaaaagcagtactacttcactgtaaatttcacc
catgaaaaccagaaagccctggagttgcgtacagaggatgtcaaggacggtgatgaatgg
gtggctgcaataacacatgccagttacaggaacctggccacggagcacgagacgctcatg
cagaagtatctccatctaattcagatcgtggagacagagaaaacggttgctaagcaactt
cgacaacagatagaggatggggaaatagagattgaacggctaaaatcagagatttccggg
ctgcacaaagacaatgggaagatccagtcgagtccaacagctgaacccagtgaagatgat
gactctgaactcaagaaaataaaaaaagtgcagagtttcctacgaggctggatgtgcagg
aggaagtggaagaccatcatccaggactacatccggtctccccacgccgagagcatgagg
aagaggaaccaggtggtgttcagtatgctggactctgaggctgagtacgtccagcagctc
cacatcctggtcaacaatttcctccgaccgctccgtatggccgccagctccaagaaacca
cccatcacccatgacgacgtcagcagcatcttcctcaacagtgagaccatcatgtttctg
catcaaatattctaccaagggttgaaagcaagaatagcaagctggccaacattagttttg
gctgacctgtttgacatcctgctgccaatgttgaacatctaccaggagtttgtgaggaac
caccaatacagtctgcagatcctggcacactgtaaacagaaccgagactttgacaagctg
ctgaagcagtatgaggccaagccagactgtgaggataggactctggagaccttcctcacc
taccccatgttccagattccccgctacattcttacactccatgagctcctggcccacaca
ccacatgagcatgtggagaggacgagtctggactatgccaagtcaaagctggaggagctg
tccagaatcatgcatgatgaggtgagcgagacagagaacatcaggaagaacctggccatt
gagcgcatgatcgtagaaggctgcgagatcctccttgacaccagccagacattcgtcaga
caaggctctctcatccaggtgccaatgagtgagaagggcaagatcacccgtgggcgactg
ggctctctgtctctgaaaaaggagggggagaggcagtgcttcctcttctctaagcatgtc
attatctgcaccaggggctctggaggaaaactgcacctcaccaagaatggcgtggtctct
cttattgactgcactcttctggaagaccccgaggggacagatgatgagtccaaaccagac
aagggtgtacaggacatggagcatctggactttaagatcgtggtggagcctaaagaaggc
cagtcgtttacagtgatcctggtggcctcctcgcggcaggagaaatctgcctggaccagt
gacatcagccagtgcatagacaacatccgctgcaatgggcttatgatgaacgcatttgag
gagaactctaaagtcaccgtgccacagatgatcaagtccgacgccagcctgtactgtgac
gacgtggacatccgtttcagtaagatgatgaactcgtgtaaggtgttgcagatccgctat
gccagcgtggagagactcctggagaggctgacagacctgcgcttcctctccattgacttt
ctcaacaccttcctgcactcctaccgcgtgttcaccagcgccaacgtggtgctggacaaa
ctcatcaccatctacaagaaacccatcagtgccatcccagcccgatccctggagttgttc
ttcgccagcagtcagaacaataaactcctatatggggagcctcccaaatcccccagggcc
agccgtaagttctcctccccccctcccctggccatcaccaagacatcgtcccctaaccgc
cgccgtaaactctccctcaacatccccatcatcactgggggcaaggctctggaactggcc
gccctcagctgctcctccaacggctatgcaagcatgtactcctccatgtcccccttcagc
aagaccaccctggacatcaataagctttatgtcaccagccccatcaccagtaagatccct
gacgagggagagggcaagacagacaaggcagaggagaccattgtgtctaaacaagatatt
tcagttccggaggaaagtgacattgaccaaaaccagagcgatgacgcagacccagaaacg
tctcctatcaagtcgccaaccacccctaaaaacatgaaatgcaaaaactcttcagaattc
tccctgttttcctacaataatggcacggtgatgtcatcgtgccgccctgagatggacaac
aacaatcgcagtgccctctctgcagcctccgccttcgccatcgccacggcaggagccaat
gagggcacgcccaccaaggagaagtaccgccgcatgtccctggctagcacagggttccca
acagaccagaggaatggggacaaagagtttgtcatccgaagggctgcaaccaacagagtc
ctgaatgttctgaggcactgggtgtcaaaacactctcaggactttgagagtaacactgag
ctgaagctgaaggtgatagccttcctggaggaagtgatgcatgacccggaactgctgacc
caggaaaggaaagcagccgccaacatcatcaggaccctgacacaggaggacccaggtgac
aatcagatcagcctcgaggaggtgacacagctggcatcagtagggaaggcggaagcgttt
gagagccattctgccttggagatagcagagcagctcaccctactggaccacctggtcttt
aaggtcatcccatatgaagagttctttggtcaaggctggatgaagaatgacaagaatgaa
aggacaccatatatcatgaaaacaacaaagcatttcaatgatatcagtaacctgattgcc
acagagatcctgcgttgtgacgacgtgaccacacgggtggcggtgatggagaagtgggtg
gcggtggcggacatctgccgctgtctccataactacaacgctgtgctggagatcacctcc
tccctcaaccgcagctctgtgttccgtctcaagaagacctggctcaaagtgtccaagcag
actaaaaccgtaattgacaagctgcagaagttggtttcgtcagaggggaggttcaaaaac
ctaagagaggctttaaagaactgtgaccctccctgtgtaccatacctggggatgtacctc
actgatctggctttcattgaggaggggacacccaattacactgaggacaaattagtcaac
ttctcaaagatgaggatgatttcccatatcatcagagatattagacaattccagcaaacg
gcatacaagattgatcatcagccaatggcagcacagtatttgctggacaacagctctgtt
ctggatgaagaaagcctgtatgaagcctctctcagaattgagcctaaagtcaacaactga
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