Salvelinus sp. IW2-2015 (Arctic char): 111962480
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Entry
111962480 CDS
T05762
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein
KO
K10895
fanconi anemia group I protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111962480 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salp03400
]
111962480 (fanci)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
111962480 (fanci)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
MIF
Motif
Other DBs
NCBI-GeneID:
111962480
NCBI-ProteinID:
XP_023841359
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Position
LG4q.1:29:complement(70995233..71015460)
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AA seq
1332 aa
AA seq
DB search
MRADIMEKIVSLSDGERIPELQQYLSSLTDDQLTTVVTNSALKGKDIGAMVKSIFKGSPP
SAPEGASRRLLLYQHCITLCESGDLQTEVASDIIGLLMLETHNLPGPSLAQLASLFVDAI
KLGKMGSGKSLELFPTVLTALAATEALSYGKGELSGEEYKKQLINSLCSSRWDPQCVIHL
TTMFRDVPLAPEELQFLVEKVLRMFLKLDLQEIPPLVYQLLLLAAKGCKKQVLEGIISYF
KEQDFRQKEEQKDGESMDVEVQSVPQDQLRHVEGTAILHIVFAVRLDQELGREFLKSVKG
SQGELCPFSIALLLSVARIQRYEEQLFDFLKGAITKGFKDEQLQQGSKFLQDLLPQRCSL
AQMILDTVKNSVFGWDHVTQGLVQLGFILMDAFGPKAGPFGKTATEGANATAKTPIQQAC
RLGGQVLLEGFKMHEPIRGEILEQVLNRLVTKTASPVTHFIDLLSDIVVSAPMILLESSS
KVTETFDHLSYLPLATVQGLLKAVQPLLKVSMSMKDALILVLRKAMFSSQLDGRKSAVTG
FLLLLKNFRVLGSMGSSQASQAISSSQVQVDVHSRYNSAANEAFCLEILSSLRRCLGQQA
DVRLMLYEGFHDVLRRNSQLASSIMQTLLSQVRRYYEPEQDLLPPVKLELCIGAQGDQVF
LQEPLAHLLSCTVHCLLWYQGMRRSARPNAGGSDDDDDDEEEGGFQDELQSILESITRRM
IKCELEDFELDKSAEFSLSSVGVKNSIYAVLVMGVYEVLIEYNFTKANYSKSLFEELLEL
FSRYNKLSEILKEKSGKGKSSKSPRSLLSMGFVSTLLTALFRDSAQSREEALLVLRSSGD
FLRYAVSVALQKITQLEETGHTDGPDGQNTDKTFHHLCDITSVLMWRYTNIPCAVEDAGK
KEKRCSVSLLCLEGLLRIFSTGQQRYPARVAQLLSAIDVSVEEGSDHGPGNASVTEKTAF
YIRQFQRSLFTQLSGGEEDFNSKEAQLLVNILSVLSRQLEPSSQQFVQMITWTVKICKET
SFEDVAFSKGLLSLLFSLHVLYKSPVSLLWELCQDIHSQLGDIDQDLEVEKQSHFAIVNM
KTAAPTTLLVLSQVGKVLDEVDWLITKKKGQLVPDRLSSGDATQAAGQQDPVEKALTLQL
GTLLTALNELVQTALPSGVCTNTLLGELSRTYTILTNLVKYYIQLCSGQQGLLPARVEKL
VKLSGSHLTPQCYSFITYVQSGELAGGSADDKKKKKKEGEATATASAKLLRETKAIPNLI
YSIEQYEKYLITLSKKSKVNLMQYMKLSTSRDFRINAATLEAALQEHDNSQQTIASQEPE
QSQEPKKKRKKQ
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgagagctgacataatggagaagatagtttcgttgtctgatggagagcgcatcccagag
ctgcagcagtacctctcatccctgactgatgaccagctgaccactgtggtaacaaacagt
gcgttgaaggggaaggacattggagccatggtcaaatccatattcaaaggctctccgccc
agtgccccagagggggcgagtcgcaggctgctcctgtaccagcactgcatcaccctgtgt
gagtctggagatctccagacagaggtggcatcagacatcattggactgctcatgctagag
acccacaacctgcccggcccctccctggcacagctggcgtctcttttcgttgatgccatt
aagttgggtaagatgggcagtggcaaatccctggagctcttccccacagtcctcactgcc
ctggctgccactgaggctctatcctatggcaaaggtgagctcagtggggaagagtacaag
aagcagctcatcaacagcctctgctccagcagatgggacccacagtgtgtgatccacttg
accactatgttcagggatgtgcccttggccccagaggagctgcagttcctggtcgagaag
gtcctgaggatgttcctcaaactagacctgcaggagatcccacctttggtctaccagctg
ctgctgctggctgctaagggctgtaagaaacaggtcctggaaggaatcatcagctacttt
aaagagcaggattttcgccagaaagaggaacagaaagatggagagagtatggacgtggag
gttcagtccgttcctcaggaccagctgaggcatgtggagggcacagccatcctgcacata
gtttttgcagtgcggcttgaccaggagctggggagggagttcctgaaaagtgttaagggg
tcccagggggagctctgtccgttcagcattgctctgctgctctcggtggccaggattcaa
cgctacgaggagcagttgtttgatttcttgaagggggcgatcactaagggcttcaaggat
gagcagctgcagcagggctccaagttcctgcaggacctgctgcctcagcgctgcagcctt
gctcagatgatcctggacactgtcaagaacagtgtgtttggctgggaccatgtgacccag
gggctggtccaactgggcttcatcctcatggacgcctttggccccaaggcagggccgttc
gggaagactgcaaccgaaggggccaacgccacagccaaaacacccatacagcaggcctgt
cggctggggggacaggtcctcttggagggcttcaagatgcatgagccaatcaggggtgag
attctggagcaagtcctgaaccgattggtcaccaaaacagcctcccctgtcactcatttc
atagatctcctctcggacattgtggtctcggctcccatgatccttctggagtcatcatcc
aaggtgacagagacgtttgatcacctgtcctacctgccactggccactgtgcaagggcta
ctcaaggctgtccagcctctgctgaaggtcagtatgtccatgaaggatgctctgattctc
gttctgaggaaggccatgttctccagccagttggatgggaggaagtctgcggtgacgggc
ttcctgctgctgctgaagaacttccgggtcctgggtagcatgggttccagccaagccagc
caggccatctcctccagccaggtccaggtggatgttcactcccgctacaactctgctgcc
aacgaggccttctgcctggagatcctcagcagcctgcgccgatgtctgggccagcaggcc
gatgtacgactcatgctctacgagggtttccatgatgtcctccgccgcaactctcaacta
gcaagctccatcatgcagaccctgctctcgcaggtgaggcggtactatgagccagagcag
gaccttctgcccccagtgaagctggagttatgcatcggtgctcaaggagaccaagtcttc
ctccaggagcctctggcccatctgttgagttgcacagtccactgcctgctctggtaccag
ggcatgcgccgttcagcccggcccaacgcaggcggaagtgacgatgatgatgatgatgaa
gaggaagggggatttcaggacgagctgcagagcatcctggagagcatcacgcgccggatg
atcaagtgtgaattggaggactttgagctggataagtcggctgagttctccctgtccagt
gtgggggtgaagaacagcatctacgccgtgctggtgatgggagtgtacgaggtgctcatc
gaatacaacttcaccaaggccaactacagtaagagtcttttcgaggaactcctggagctg
tttagtcgctataacaagctgtctgagatcctgaaggagaagtctggaaagggcaagagc
agcaagagccctcgaagcctgctgtctatgggctttgtgtcaacactgctcactgcactc
ttcagagacagcgctcagagcagagaggaggctctgttggtgctgcgctctagtggggac
ttcctgcgttacgctgtgagcgtggctctgcaaaagattacacagttggaggaaactgga
cacactgacggccccgacggacagaacacagacaagaccttccaccacctctgtgacatc
actagtgtcttgatgtggcggtacaccaacatcccgtgtgcagtggaggatgctgggaag
aaggagaagcgttgcagtgtgtccctgctgtgtctggagggcttgctgaggatcttcagc
accgggcagcagcgctacccagccagggtggcccagctcctttctgccatcgatgtctct
gtggaggaagggagtgatcacgggccagggaatgccagtgtcacggagaagactgctttc
tacattcgccagttccagaggtcactgtttacccagctgagtggaggggaggaggacttc
aacagcaaggaggctcagctcctggtaaacatcctgagtgtgctctcacgccagctagaa
ccctcctcccagcagtttgttcaaatgatcacctggacagtgaaaatctgcaaggagacc
agctttgaggacgtagcgttcagtaaaggcctgctctccctgctcttcagtctgcacgtg
ctctacaagagtcccgtcagtctgttgtgggagctttgtcaagacatacacagtcagctg
ggagacatcgaccaggatttggaagtggagaagcagtctcactttgccatcgtcaacatg
aagaccgctgcgccgacaacactcctggtgctgtctcaggtggggaaagtattggatgag
gtggactggctgatcaccaagaagaaaggccagttggtccctgacaggctcagctctggt
gatgccacccaggctgcaggccagcaggacccagtggagaaggcgctgacgctgcagctg
gggactctcctgacggccctgaacgagctggtccagaccgccctgccatctggagtctgc
accaacacactgctgggagagctgagccgtacatacaccatcctcaccaatctggtcaaa
tattatatccaactgtgctcaggccaacagggcctgctcccagcacgcgtggagaagctg
gtcaagctgtccggctctcacctgactccacagtgctactccttcatcacctacgtgcag
agtggtgagctggccggtggaagtgcagatgataaaaagaagaagaaaaaggagggggag
gccacagctacagcatcagccaaactcctacgtgagaccaaggccattcccaacctgatc
tacagtatagaacagtacgagaaatacctcatcaccctctccaagaaatcaaaggtgaac
ctgatgcagtacatgaaactgagcacgtccagagatttccgcatcaacgcagccactctg
gaggcagcgctgcaggagcacgacaacagtcagcaaaccatagcctcccaggagccagag
cagagccaggagcccaagaagaagaggaagaagcagtaa
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