KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111962544
Entry
111962544         CDS       T05762                                 
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:salp04990]
    111962544
Domain-containing proteins not elsewhere classified [BR:salp04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   111962544
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st DSE1_N CFAP251_N Beta-prop_Vps41 Beta-prop_HPS5 eIF2A Beta-prop_TEP1_C ASA1 Beta-prop_WDR35_TULP_N PAC11 Beta-prop_NOL10_N Beta-prop_VPS8 NBCH_WD40 Beta-prop_EIPR1 PEP5_VPS11_N Tricorn_2nd WDR90_beta-prop_4th TRM82_WD Beta-prop_SPT8 Beta-prop_NUP159_NUP214 RMC1_N PROPPIN Beta-prop_RIG_1st Beta-prop_SCAP Beta-prop_ELP1_1st Beta-prop_ACSF4 Beta-prop_WDR11_1st DUF7165 Beta-prop_DCAF12 WD40_RFWD3 DNAI3_WD DUF5711 WD40_like HPS3_N
Other DBs
NCBI-GeneID: 111962544
NCBI-ProteinID: XP_023841467
LinkDB
Position
LG1:complement(22302266..22315500)
AA seq 606 aa
MSYELKHLFASLPQMERGVAKVLGGDPKGNNFLYTNGKSVIIRNINNPAIADIYTEHPHQ
VTVAKYAPSGFYIASGDVSGKIRIWDTTQKEHLLKYEYQPFGGKIKDIAWTEDSKRIACV
GEGREKFGAVFLWDTGSSVGEISGHSKVINSVDIKQTRPYRLISGSDDNCGAFFEGPPFK
FKFSITDHSRFVNCVRFSPDGNRFCTAGADGQIFLYDGKTGEKICALGGAKAHEGGVYAV
SWSPDSSQLISASGDKTVKLWDVGTSTALTTFNMGADVMDQQLGCLWQKDHLLSVSLSGY
INYLDKSNPDRPLRTIKGHSKSIQSLTVHKNGGRSYIYSGSHDGHINYWDAETGENNDFS
GKGHSNLVTKMAVDDADQLVTCSMDDTVRFTSVTKKEYSASNLVKMDVQPKHVSVAAGGL
ALXVCIGQVVFLKDKKKVFTLDSLDYEPEAGAIHPGGSTAAVGGADGKVRLYSVQGNTLK
DEGKSVEAKGPVTDMAYSKDGAYLAVTDEKKVVTVFTVADNYSVKNDFYGHHAKVVTLAW
SPDNEHFASGGMDMMVYVWTVNDADKRLKIPDAHRLHHVSGLAWIDEHTLVTTSHDASVK
QWTLKF
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgtcatatgaattgaagcatttatttgccagcctcccgcagatggaacgaggagtcgcc
aaagtcctaggtggcgatcccaaaggcaacaacttcctctataccaatggaaagagcgta
atcatcaggaacattaataaccctgccatagctgatatctacactgagcaccctcatcag
gttactgtcgccaagtacgcccccagtggcttctacattgcttctggagatgtgtctggt
aagatccgtatctgggacactacccagaaggaacacctgctgaagtatgagtaccagcct
ttcggggggaaaatcaaggacatcgcatggactgaggacagcaaaaggattgcttgtgtg
ggagagggacgtgagaagttcggggctgtgttcctgtgggacactggctcctctgtggga
gagatctcaggccactcaaaagtcatcaacagcgtagatatcaagcagactcgcccctac
cgtctgatctccggaagcgatgacaattgtggagccttctttgagggaccacctttcaag
ttcaagttctcaatcacagaccacagcaggtttgtcaactgcgtgcgtttctctccagac
gggaaccggttttgtacggctggcgctgacggtcagatcttcctgtacgacggaaagact
ggtgagaagatttgcgctctgggcggagccaaggcccacgagggaggagtctatgccgtg
agctggagccccgacagctcccagctcatctctgcctcgggcgacaagacggtgaagctt
tgggacgtaggcaccagcacygccctcaccaccttcaacatgggcgctgacgtcatggac
cagcagctgggctgcctgtggcagaaggaccacctgctcagcgtctccctgtctggttac
atcaactacctggacaaaagcaaccctgaccggccgctccgcaccatcaagggtcacagc
aaatccattcagtccttgacggttcacaaaaacggggggcgttcttacatctactcgggc
agccatgacgggcacatcaattactgggacgcagagaccggggagaacaacgacttctca
gggaagggccacagcaacctggtcaccaagatggctgtggacgatgctgaccagctggtg
acctgcagcatggacgacacggttcgcttcaccagcgtgaccaagaaagaatacagtgct
tccaacctggtaaagatggacgtccaacctaaacatgtgtcagtagcagcaggggggctc
gctttgyctgtgtgcatcggacaggtggtgtttttgaaagacaagaagaaggtgttcacg
ctggacagtctggactacgagccggaagcaggagcaatccacccagggggcagcactgcg
gcagtgggcggggcagatggaaaggtccgcttgtattctgtccaaggcaacactctgaag
gacgaggggaagagcgtggaggccaaggggccagtcacagacatggcctactccaaagat
ggcgcctacctggccgtcactgacgagaagaaggtcgtcacagtcttcacagtggcagac
aattactcggtcaaaaatgatttttatggacaccacgcaaaagtggtcaccctggcctgg
tctcccgacaacgagcactttgccagtggtgggatggacatgatggtctatgtttggaca
gtgaatgacgcagacaagagactgaagatcccagatgcccacaggttgcaccatgtcagt
ggcctggcctggatagatgagcacactctagtgaccacctctcatgacgccagcgtcaag
cagtggactcttaaattctga

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