Salvelinus sp. IW2-2015 (Arctic char): 111962557
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Entry
111962557 CDS
T05762
Symbol
shank3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SH3_2
SAM_2
SH3_9
Ank_3
Ank_5
SH3_1
PDZ_6
PDZ
2C_adapt
Motif
Other DBs
NCBI-GeneID:
111962557
NCBI-ProteinID:
XP_023841485
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All DBs
Position
LG4q.1:29:76109745..76412703
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AA seq
1842 aa
AA seq
DB search
MSLSEGARERREVVKELKRGILEGRIYLTPYMANLKKFMEYVQQRNIEKVSKFLEKGLDP
NFHDPESGECPLTMASQLEGCADLIKVLKSGGAHLDFRTRDGITALHKSVRTKNHTALIT
LLDLGASPDYKDSRGLSPLYHSSMVGGDPYCCELLLHDHAQVGCVDENGWQEIHQACRHG
HVQHLEHLLFYGADMTAQNASGNTALHVCALYNQDSCTRVLLFRGANKEIKNYNSQTAFQ
VAIIAGNFDLAEIIKIHKVSDVVPFRETPSYTNRRRVLVGGLPSPRSLLRSASDNNLNGD
SSQGLGQGLGQGHGRQGQSPVPSLRSLPALGQHQQHASLGETRHGEMPDSSLQSTGSSRS
SHSRSPSLHSHLHEGDQGIRKTHGHPLGHVPRGRLSPGTVQRDPSPPTHTPPAIAGASGP
KRKLYSAVPGRTFIVVKPYTPQGEGEIQLNRGERVKVLSIGEGGFWEGTVKGRTGWFPAD
CVEEVQMRQYDPRLETREDRTKRLFRHYTVGSYDNVTSIQCHSDYIIEEKNAMLQKKENE
GFGFVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVHGVNVVK
VGHKQVVSLIRQGGNSLLMKVVSVTRKPESEDVVRKKAPPPPKRAPSTTLTLRSKSMTAE
LEELASVRRRRGETLDEMLVPQEPVTLRSQPTEADYRAATVKQRPTGRRITQSEISSLFE
RQGMALHGGLHPRMERAHMQLPRGMSRTKSFGATEEDRLSVLAGEHRFPRSSSMTDSLRD
HSHSHSIPPPPQTAPPPPPSLYYLDTGPPPAFCPPPPPARGHGQGHDPAGRSSFKPSSLD
LDRPYDPSPRQSSHLERQKKTRSMIILQDSSHLPVEPSDIPRPSASATPPERIKRKGRVI
DNPYANVGQFSIGLYTPTKPQRKKSPLVKQLQVEDAQERASIALAAAHSREPSPSGRHPH
THGHTHTSRADYYQQQLMVERERMRLQGEALLQGKGPFAAAIAGAVKDRERRLEERRKST
VFLSVGTMEGGSGSVPEAPSYTTSRSIDERLLSRELGQLPPPALALRPSPGGTTFIHPLT
GKPLDPNSPLALALAARERALTSQSQSPASSPEPRTKQDRAGVGGQGASLFIESQTKEPQ
HGGGRPGSPQAGKSQWAVSSPALLRQEMEGRGEERKEERRTEDKKSMLISIMDTSQQKTA
GLIMVHATSNGQAVGLGPGLEQTPTSPATEPSKPSLSRALSPSPSASQPQAQGPSSPAQA
PLAQGSSEEDVEPYTVSLPPAMLSSSDEETREELKKIGVLPPPDEFSNGLLANSQAQAHG
TPVPQSKSTTSPTTPTLLTPSTTTPNPSLTPTSSLTPTQPQGPPLQPTPGGAVISGKPSY
PDQPHPPALLAESGSAADSGVEEADTRSSSERERDHHLETTSTVSTVSSMSTLSSESGEP
ADTHTSYADGQTFVLDKPPVPPKPRLKSHIGGSKGPVTFRDPLLKQSSDSELLSQQQAAA
LAAAAAGGAGLGHGGLGSGGLGHGGLGSGGLGHGGLGSGGLGHGGLGSGGLGSGSISGLV
GGPGRPRYLFQRRSKLWGDQMEARGPGVGLGMGSLGSLGGLGLGLGGEEGGKPSVMGELS
SRLQQLNKDTRSLGEEEPLGSSLDPGRKSPVTGARLFSSLGELHTISQRSYGTTYTIRPG
SRFPVTRRTPSPGSGSPDRGDPLSRLPGFGLPTSPTTPHHTILKSSSLSLHHEPKEVRFV
MRSSSARSRSPSPSPCHSPGLGSPLLALRPFHQKPLHLWNKYDVGDWLESINLGEHRAGF
QEHEIEGSHLPALTKDDFAELGVTRVGHRMNIERALKQLLES
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgagtgagggagcacgagagagacgtgaagttgtgaaggagttaaagagaggg
attttggaaggacggatatatttgacaccttacatggcgaacctgaagaagtttatggag
tatgtacagcagaggaacatcgaaaaggtgtccaagttcctggagaaaggtctggacccc
aacttccacgaccctgaatcgggagaatgtcctctgaccatggcgtctcagctggagggc
tgtgcagacctcatcaaggtgctgaagagtggaggagctcacctggacttcaggacccga
gacggcatcactgcactgcacaagtctgtccgcaccaagaaccatacggccctcataacg
ttgctggacctgggtgcgtctcctgactataaggacagtcgggggttaagtccgctttat
cacagctctatggtaggaggagacccctactgctgtgaacttctgctccacgaccacgct
caggtgggctgtgtggacgagaacggttggcaggagatacaccaggcatgccgtcatggt
catgttcagcacttggagcacctgctgttttacggagccgacatgactgctcagaacgcc
tctggaaacaccgcccttcacgtctgtgccctctacaaccaggatagctgtaccagagtt
ctactgtttcggggagcgaataaagagatcaagaactacaacagccagacagcctttcag
gtggccattatagcaggaaactttgatctggctgaaatcatcaagatccacaaagtgtca
gacgttgtgcctttcagggagaccccctcctacaccaaccgtagacgtgtgttggtggga
ggactgccctcgccccgctccctgctgcgctccgctagcgacaacaacctcaatggggac
agcagtcaaggtctgggtcaaggtctggggcagggtcatggtcgacagggtcagtctcct
gtcccctctctgaggagcctgcctgcactgggacaacaccaacaacacgctagcctgggg
gagactcgtcatggagagatgccagacagcagtctccagagcacaggcagctctcgctcc
tcccactcccgctctccctcgctacacagtcatctgcatgagggcgatcagggcatcagg
aagacacacggacaccctctaggacacgtccctcgaggacggctcagcccgggtacggtg
cagcgggaccccagtccccccacccacacccctcctgccattgccggtgccagcgggccc
aagcggaaactctacagcgccgtaccgggacgtaccttcatcgtggtcaaaccatacacg
ccacagggtgagggagagatccagctgaaccgtggagagagagtgaaagtgttgagtata
ggagaaggaggtttctgggagggcacggtcaaagggagaacaggctggttccctgccgac
tgtgtggaagaagttcagatgagacagtatgaccctcggctagagacaagagaggaccgc
accaagagactgttcagacactacactgtgggatcttacgacaacgtcacctcaatacag
tgccattctgattacatcatagaggagaagaatgctatgctgcagaagaaagaaaacgaa
ggcttcggcttcgtactgcggggagccaaagctgagacgcctattgaggagttcacccca
acacctgcattccctgccctccagtacctggagtctgttgacgtggagggagtggcctgg
agggctgggcttaggacaggagacttcctcatagaggtgcacggagtgaacgtggtgaag
gtgggccataagcaggtggtgtctctgatcagacaggggggcaacagcctgctgatgaag
gtggtctctgtcacacgcaaacctgagtccgaggacgtggtccgcaagaaagctcccccg
ccacccaagagagcccccagcaccactttgacactgcgctccaagtctatgaccgccgaa
ctggaggaactggcttccgtccggaggaggagaggagaaacgctagatgagatgctagtg
cctcaggagcctgtgacgttacgttcccagcccacagaggcagactacagagctgctact
gtcaaacagagacctaccggcaggagaatcacacaatcagagatcagttcgttgtttgag
aggcagggcatggcattacatggtgggctccacccaaggatggagagggctcatatgcag
ctgcctagagggatgtccaggaccaagtcattcggtgcgactgaggaggaccgtctgtcg
gtgttggctggagaacaccgtttcccccggagctcctccatgacggacagcctcagagac
cactcccactcccattctatcccgccccctccccagaccgcacctcctcctcccccttcc
ctctactacctggacactggccctcctcctgctttctgcccccctcctccccctgccagg
ggtcatggtcagggtcatgaccctgcaggtcgttccagcttcaagccctcctccctggac
ctggaccggccctacgacccatcgccccgccagtcctcccatctcgaacgccagaagaag
acaaggtcaatgattattctacaagactcctcccacttacccgtggagccctccgacatc
ccccgaccctctgcctccgctacaccacccgagcgaattaaaaggaaaggacgggtgatt
gacaacccgtacgccaatgtgggccagtttagtattgggttgtacacgcccaccaagccc
cagcgcaagaagagccctctggtgaaacagctacaggtagaggacgctcaggagagagcc
agcatcgccttggctgccgcccactcccgagagccctccccctcaggtcgacacccacac
acccacggccacacacacaccagccgggccgactactaccagcagcagctgatggtggag
cgcgagcgtatgcgtctccagggagaggccctgctacaggggaaaggtccgttcgctgcc
gctatcgccggcgctgtgaaggaccgagagcgccgtctagaggaacggaggaaatcaaca
gtcttcctgtcggtggggaccatggagggggggtctgggtctgtccctgaggccccctcc
tacaccacatctcgctccatcgatgagcgcctgctcagcagagaactaggccagctgcca
ccccccgccctggccctgcgcccctcacctggcggcactaccttcatccacccactcaca
gggaagcccctggaccctaactcaccccttgctcttgcgctggccgcaagggagcgggca
cttacctcccagagccagtcccctgccagcagccctgagcccaggactaaacaggacagg
gctggtgttggaggtcagggggcttcgcttttcatcgaaagccagaccaaagagcctcag
catgggggcgggaggccggggtcgccccaggctggtaaatcccagtgggcagtgtcatca
cccgccttgcttcgccaggagatggagggaagaggggaggagaggaaggaggagaggaga
acggaagataagaagagtatgttgatcagtatcatggacacatcacaacagaagacagct
ggactaatcatggtccatgccaccagtaatggccaggcggtggggctgggaccagggctg
gagcaaacccccacctccccagccactgagcccagtaaaccctccctcagtcgggctctg
tcgcccagcccctctgcctctcagccccaggcccagggcccttccagcccagcccaggct
cccctggcccagggcagttcagaggaagacgtggagccctacacagtgagcctacctcca
gccatgttgtcctccagtgatgaagagaccagagaggagctgaagaagatcggggtgctc
ccacctccagatgagttttccaacgggttgttggccaattcacaagcccaagcccatggg
acccctgtaccccagtctaaatccaccacttcccctacaacccctactctcctcacccct
tccaccaccaccccaaaccccagcctgacccccacctccagcctgacccccacccaaccc
cagggccctcccctccagcctactcccggaggagcagtcatctcagggaaaccctcatac
ccggaccagccccatcctccagccctgctggctgagtctggttcagcagcagactctggt
gtggaggaggcagacacacgcagctccagtgagagagagcgagaccaccatctggagacc
actagcactgtgtccaccgtctccagcatgtccactctgtcctcagagagtggcgaaccc
gctgacacacacacatcctacgccgacgggcagaccttcgtgctcgacaagccgccagtg
cctcccaagccccggctcaagtctcacattggaggcagtaaaggcccggtcaccttcagg
gacccgctgctgaagcagagctctgacagcgagctgttatcccagcagcaggcggctgct
ctagccgcagcagctgccggaggggcagggctggggcatggaggcctagggtctggaggc
ctggggcatggaggcctcgggtctggaggcctggggcatggaggcctcgggtctggaggc
cttgggcatggaggcctcgggtctggaggcctagggtcaggctctatatctggcctggtg
ggaggccccgggaggccccgctaccttttccagaggaggtccaagctgtggggggaccag
atggaggcgcgaggacccggggtggggttagggatggggagtctgggaagtctagggggg
ttggggttggggctggggggtgaggagggggggaaaccatcggtgatgggggaactaagt
tccagattgcagcagctgaataaggataccaggtccctgggggaggaggagccactgggg
tcatcgctggaccctgggaggaagtcccctgtgacaggcgccagacttttcagcagtcta
ggagagctccacaccatttcccagagaagctacggcaccacctacaccattcggcctggc
agccgctttcccgttacacgccgcactccaagccctggctcgggctccccggatcggggt
gaccccctcagtcgactcccaggcttcggcctacccacctcacccaccacgccgcaccac
accatcctcaagtcgtccagcctcagcctgcaccatgagcccaaagaggtacgcttcgtt
atgaggagctccagcgcccggtcccgctccccctccccgtccccttgtcactcccccggg
ctgggctcgcccctcctggccctcaggccattccaccagaagcccctccacctgtggaac
aagtacgacgttggagactggctggagagcatcaacctgggggagcacagggctggcttt
caggagcatgagatcgagggctcgcacctcccggcactcaccaaggacgacttcgctgag
ctgggggtgacgcgcgtgggacaccgcatgaacatcgaacgagcacttaaacaactgctg
gagagctga
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integrated database retrieval system
