Salvelinus sp. IW2-2015 (Arctic char): 111962634
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Entry
111962634 CDS
T05762
Name
(RefSeq) transcription factor E2F4
KO
K04682
transcription factor E2F4/5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04110
Cell cycle
salp04218
Cellular senescence
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111962634
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111962634
04218 Cellular senescence
111962634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111962634
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
111962634
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GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
HTH_Cmi2_C
Motif
Other DBs
NCBI-GeneID:
111962634
NCBI-ProteinID:
XP_023841641
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Position
LG4q.1:29:82374204..82382887
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AA seq
396 aa
AA seq
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MELESERTEFGAMGDSLQPQTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVR
QKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTQEIADKLIDLKAELDDLDKREHE
LDQQRVWVQQSIMNVTDDSQNSPMAYVKHEDLCSAFKGDTLLAIRAPTGTQLEVPIPESV
LIGQKKYQIRLKSSAGPIEVLLVNKDPSSPSPVVLSVPPPEDMLQSLPVPAAANTKPAPT
APSQPSQPLAHSSNPSPATLLPACTATSNQAVTTAVSSTLTVSTPTTNTNAQPTPLLDTQ
PLQSSASLDGCSSSSAVFEPIKADPSELLYFPKELSDMFDPTKEIMSADLLEELMSSEVF
SPLLRLSPPPGDHDYIYNLDETEGLCDLFDVPILNL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggagctggagtcggaaagaaccgaatttggagctatgggagactcgcttcaacctcaa
accccaagtcgacacgagaagagtctaggattgcttacaaccaaatttgtatctttgcta
caagaggccaaggatggagttttagacctgaaagcagcagcagacaccctagctgtaaga
cagaagcgccgcatctacgacatcaccaatgtgcttgagggcatcggactgatcgagaag
aagtctaagaacagtattcagtggaagggtgttggtcctggctgtaacacacaggagata
gccgataaactcattgatctgaaggcagagctggatgatctggacaagcgggagcacgag
ttggatcagcagagggtctgggtccagcagagcatcatgaacgtcacagacgactcacag
aacagccctatggcttatgtaaaacacgaagacctctgtagtgctttcaaaggtgacact
ctcctagcgatccgcgctcccacaggcacacaactggaggtgcccatacctgagtcggta
ctgattggacagaagaagtatcagatccgtctcaagagctcagcaggacccattgaggtt
ctccttgtgaacaaggacccatccagcccgtctccagtggtactgtccgtccccccaccc
gaggacatgctccagagccttccagtgcctgctgctgccaacacaaaaccggcacctact
gccccctcccagcccagccagcctctggcccactcctccaaccccagtcctgccacactc
ttacctgcctgcacagctacttccaatcaggcagtcaccactgcagtgtccagcacactg
actgtttccacacccactacaaacacaaatgcccaaccgactcccctgttggacacccag
cctctccagtcctctgcctcattggatggctgctcttcttcttcagcagtctttgaacca
atcaaggctgacccctcagaattgctgtatttccccaaagaactttctgacatgtttgac
ccgactaaagagatcatgagtgcagacctgttggaggagttgatgtcttccgaggtgttc
tctccactcctccgtctgtctccccctccgggtgaccacgactacatatataacctggac
gaaaccgaaggcctgtgtgacctctttgatgttccgattcttaacctttga
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