Salvelinus sp. IW2-2015 (Arctic char): 111962636
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Entry
111962636 CDS
T05762
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111962636 (sec16a)
Membrane trafficking [BR:
salp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111962636 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
111962636
NCBI-ProteinID:
XP_023841643
LinkDB
All DBs
Position
LG4q.1:29:82577651..82656741
Genome browser
AA seq
2387 aa
AA seq
DB search
MQPPPRTGPPGASGPPPASVGPNAFRRTRPHKHTGAAVMAGLPAQPMTDPFAFGRQAPPP
MATGGHPPPPNSSPLPMQAPPPSMYHQAGMGQGLHQPQPLDSAQAGAVPLGPPPPSTPGV
SILTPHGTASPVPFPGQLPGPPGHAPPSAEQGYFNSREPAPSMTPGHLPMASAPMSGQAP
YGQDHGGDHHPQAMLFKPVPPVLSQWVPDHGSRPPSVQNYFQPTSDPLPQVCNAAPQSQI
SPHTPLPHSTPPTHPQQQHQPQPPPQHPDRPTSSQWPDLAGANTPQQHNAHFQAQTYFSQ
SSATLDSWFNQHPQDLVYHQMGAGPGLARPDSARSHYRHDSAGSHHGSHYGTYHASTPGP
APVPFIPDGTISMFFKGNDVENEETLAGEGAGAVNGLQDFQPSHNHQQMSSPQPQPNPVA
GAEATHSYRGPPPQAGQSLTYMNDGNFPGAGKPIQQKPAEAQFDHVENLECVPNQEVLPS
EHQNSPAAAAAHGGDCYEAGPNLETPDSVPRPIRSASVSSSYSNLSHGSGTGTVPRRHQG
VVGTFIQQESPRPSEDAFSSAAAGGYFEQIDTSPAGNMAAAYQSIPERMCHSQPPTPSPP
KPTGIFQASANSSFEPVRSHSVAVRPAEVDRARMVAERGSDSLPGNLEQPPDNLENVYGA
ATGHTQAGDGAGAPPLAYPLSHSHSRPSSRAHVAHRPCESPATTLWAQHDPASLGTNILL
VPAAPPVLAPLREPSAEVIQPPEDGSLDLQPPQCAPPPSQHPSENLENPPKVSEGDTSDS
QPNLGYASLLVSESLHQPVLIAPPTSNYSVIPPSNPAFAANQISPREATVPVRPPSQAQG
ASAAQPGPPLRSNQNPLFTPTPMSFSAASSQSPLNLVRDDREGVKPEITPPPSLSQPARS
PLSKVQSMCGNNHSSLPVNLQAPLPAAPGAANYNQLSNYELLDFSMHQSQIPNQAAGLPP
LSLQQGPPLASNAPGFYLQVTKDAQQVGRGNEDASTTQIPAEPMSPPVAPNTQQPPSEPP
IVPQPGHQGQGDDPAAPLSGAPPPQEQYPPPMQGPATGNAPTPSAAYPGPRGHVPLANPP
PPGTGVPLAQPAQPAPTDSQRPPSSLGSQLGYGPPPPGQVYGGYYGGAYPEYPDGRGSYL
PAQYPPAPVDPRAQQYYQDDPYMIADPRYGRYEGANPAYPPYREPPPERPSSRTSQYSDR
PSSRQGFPPEDYQRANRSAYDDYYAEYYKNQYGDRSRWEGYNASAGTYDPRYRDYYDQNY
WYNYNPEAYRGREAAYYNQQPTQQYPAATARPPGYDDKWRYYPGYDASFDDDYRRQKDQY
RDDFDRRSVHSEQSAHSLHSSQSHRSRRSSFSSRSQQSEVYRSQPDLTAVYDPAVSTLPV
DYSYGQYPEQTDPGQSFSQYPYTSGYQADDSTWVVAEQPPPRPITPEKYSVSHRCARFGP
GGQLIQVLPNLPSAGQPALVEIHNMETMLQDTPDQSELRSFPGPLLKEETHKVDVIKFSQ
NKGLECARNNDLLDKDSAALLWDFIVLLCRQNGTVVGTDIADLLLKEHRSVWLPGKSPNE
ANLIDFNNEPLARAEEEPGTGPLSLLSDTFMTVPENVGKETERFRELLLFGRKKDALEAA
MKGALWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGRMPASATCCGDEK
WGDWRPHLAMVLSNLTHTLDLDTRTITTMGDTLASKGLTDAAHFCYLMAQVGLGVFTKKS
TKMVLIGSNHSLSFFQFASNEAIQRTEAYEYAQSLGSQPCSLPNFQVFKLIYACRLAEAG
LCAQAFHYCEVISRSVLMQPSYHSPVFTSQLIQMSEKMRFFDPQLKEKADQELFNEPEWL
IHLRQLDGQMRTGVIAYNADRDTPQQYDCSTPNSELDQTSPPEPYAQPLDMVGHTSDNPL
MTSLMPGPPQQGVQLMPPAPPTILQDGMVSQPPHPNEGVQFYPVPPSLPGPPGQIPLSGF
PPQGSGFVQPYQPQQPQPDKNDMFPGAQHQQMAPPQHQQQMMPPPQHQQQMMPPQMQQPQ
KMPSDDYQLTGPPELQPPPMSTSPQRNTFTPQMDFYDQMAHMGPGRRSRTTSQSSMQMQP
PGRRSRTMSESSTHSGGRERSNSAAKQSSPPPPSIPEQAKKDSPKKGGGGGGGGWLNWLY
RKGKNEAHLPDDKNKSIVWDEKKQKWVNLDEPEEEYKPPPPPPSGFPKMLGPIPGQGGPG
GPPTGGPPVNMFSRRAGTKSRYVDVLNPGGPRAKPGGSAPAPSDFFAPLAPMPMPANLFV
PGAEEQQPMEGNVPETGGNQEQSDPNPSAVPQMFNPTLLPPGPVGPPIAAGSPPGEVPLT
PQPPPQGAPPSGGVTFYNPAQFAQASTPSGRLLSGRLGGQRAYPVLK
NT seq
7164 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctcctcggaccggcccccctggtgcatccggcccccctcctgccagcgtt
gggcccaatgccttccggaggacaaggccccacaagcatacaggagcagcggtcatggcg
ggactacctgcccagcccatgacagaccccttcgcatttggcaggcaagcccctcctcct
atggctacaggtggtcacccgccgccacccaatagcagccctctgcctatgcaagccccg
cctcccagtatgtaccaccaggctggcatgggtcaggggctgcaccaaccacaaccactg
gatagtgcacaggctggggctgtgccccttggcccaccaccgccctctaccccaggggta
agcatcttaacccctcacggtactgcgtcccctgtcccttttcctggacagctacctggc
ccgccaggccatgcaccaccaagtgcagagcagggctattttaactctagggagccagca
ccctcgatgaccccaggacaccttcccatggcctcagcccctatgtctggccaagcgcct
tatggccaggaccacggaggagaccatcaccctcaggcgatgctctttaagcctgtgcct
cccgttttgtctcagtgggtgcccgaccatgggagccgccccccgtcggttcagaactat
ttccaacccactagtgatcctctaccccaggtttgtaatgccgctccccagtcccagata
tctccacacacacccttgccccacagcacccctccaacacacccccagcagcaacaccag
ccccaaccacctcctcagcacccagacaggccaactagctcccagtggcctgacctggca
ggtgcgaacacaccccagcaacacaacgcccattttcaggctcagacctacttcagccag
agctcagccaccctggactcctggttcaaccagcacccccaggacctggtctaccaccag
atgggtgctggtcctggcctggctcggcccgactcagccagatctcactatcggcacgac
tcggccgggtctcaccatggatcccactatggaacttaccatgcatcaacccctggccca
gcgccggtccccttcatcccagacggcaccatctccatgtttttcaaaggaaacgacgtg
gagaacgaggagacccttgccggagagggagccggggcagtgaatggtctccaggacttc
cagccctcccataatcaccagcagatgtcatcccctcaaccccaacccaacccggtggca
ggtgcagaggccacccacagttaccgtgggccccccccacaagctggccaatcattaacc
tacatgaacgatggtaactttcctggagctggcaaacccatccagcagaaacctgctgag
gcccagtttgaccatgtggagaacctggagtgtgtgcccaaccaggaggtcctacccagc
gagcaccagaacagccctgctgcagcagccgcccacgggggagattgctacgaggcaggc
cccaatctggagacccccgactctgtcccccggcccatacgttctgccagcgtgtcctcg
agctacagcaacttgagccacggcagcggcactggtacagttccacgccggcaccaagga
gtggtgggcaccttcatccagcaggagagccctcgtccctcagaggacgcattctcctca
gccgctgccggaggctactttgagcagattgacacctctccggccgggaatatggccgct
gcttaccagagcatcccggagagaatgtgccacagccaaccccctacgcccagtcctccc
aaacccaccggcattttccaggctagtgccaactcctcctttgagcctgtgcgctcacac
agtgtcgcagtgcgcccggcggaggtggaccgtgcccggatggtggcggagaggggctct
gactctctgcctgggaacctggagcagcctccagacaaccttgagaatgtctacggagca
gctacagggcacactcaagctggggatggagctggagcacctcctcttgcataccctctg
agtcactcccactccaggccctcgtcccgggctcatgtggcccaccggccctgtgagagc
cctgccaccaccctgtgggcccaacatgaccccgctagcctgggaaccaacatcctgctg
gtccccgctgcccctccggtccttgccccactgcgagagcccagtgccgaggtcatccag
ccccccgaggatggctccctggaccttcagccccctcaatgcgcccctccgccctcccag
cacccctcggagaacctggagaaccctcctaaggtgagtgagggggacacgtctgactcg
cagcccaatctgggctatgcctctctcctggtgtctgaatcgcttcaccagcccgtgttg
attgccccacccacctccaattacagtgtgattcctcccagtaaccctgcattcgcagcc
aatcagatcagccccagggaggccacagtacctgtgaggccgccctcgcaggctcaaggg
gccagtgccgcacagcccggtcctcccttgcgctccaatcagaacccattatttacccct
acaccaatgagcttcagcgccgcctctagccagagccccctcaatcttgttcgggatgac
agggaaggggttaaaccagagatcacgcccccaccatccctgtcccagcctgctcggtcc
cctctctcaaaggtccaatcaatgtgcggaaacaaccattcttctctacctgttaatttg
caggctcctcttcctgctgctcctggtgccgccaattataatcagctctcaaattacgag
ctgcttgatttttctatgcaccaatctcagatcccaaaccaagccgcagggctgccacct
ctctccctccagcagggcccgcccctggcgagtaacgctcctgggttttacctgcaggtc
accaaagatgctcagcaggtgggtagaggcaacgaggacgcctccacaacacagatacct
gccgaacccatgtcccccccagtggccccaaacacccaacaaccaccctctgagccaccc
attgtgccccagcctggtcaccaaggccaaggagatgaccctgcagcccctctcagtgga
gcaccaccaccgcaagagcagtacccacccccaatgcagggtcctgccacggggaatgca
cccaccccctctgcggcttaccctggacctcggggacatgtgcctctagccaacccccct
ccaccaggaaccggggttcctctagcccagccagcccagccagcccctacagactcacag
cgacctccctcgtctctgggaagccagctggggtacggcccacctcctccagggcaggtg
tatgggggatactacggaggtgcctacccggagtacccagatggcagaggatcatatctt
cctgctcagtacccacccgcacctgtggaccccagagcacagcagtattatcaggatgac
ccatacatgatagcggaccctcgctacggcagatatgaaggagccaacccggcctacccc
ccatacagagagcccccgccagagagacccagctccagaaccagccagtactcagacaga
ccctcctccaggcaaggtttcccccccgaagactatcagagagctaaccgaagtgcttat
gatgactactatgcagagtattacaaaaaccagtacggagaccggagcaggtgggagggc
tacaatgcttcagcaggcacttatgacccccgctacagagactactacgaccagaactac
tggtacaactacaaccctgaggcctaccggggcagggaggcagcctactacaaccagcag
cccacccagcagtaccctgccgctaccgccaggccaccgggctatgacgacaagtggcgc
tactatcctggttacgatgccagttttgacgatgactaccggcggcagaaggaccagtac
agggacgattttgaccgacggagcgtccacagcgaacagtcggcccacagtctacacagc
tcccaaagccatcgcagccgtcgcagcagctttagctcccgctcacaacagagtgaggtg
tacaggtctcagcctgacctgacagcggtttacgaccccgctgtttctaccctgcctgtg
gactactcctatgggcaatacccagagcagacggatcccggacagagcttcagccagtac
ccctacacctcgggctaccaggcagacgacagcacctgggtcgtcgctgagcagcctcct
cctcgtcccattactccagagaagtactcggtatcccaccgctgtgcccgcttcgggcca
ggtggtcagctgatccaggtcctgcccaacctcccctcggccggccagcctgctctagtg
gagatccacaacatggagacgatgctgcaggacacaccagaccaatccgagctgcgctcc
ttccccggaccgcttttgaaggaggagactcacaaggtcgacgtgataaagttctcccag
aacaaaggcctggagtgtgcccgcaacaacgacctcctggacaaggactcggctgccctc
ctctgggacttcatcgtgctgctgtgtaggcagaacgggaccgtggttgggactgacata
gctgatctgttgctgaaggagcatcgctcagtgtggttgcctggcaagtcacctaacgag
gccaacctgattgacttcaacaacgagccactggcgcgggccgaggaggagcctgggacg
ggaccactgtccctcctatcagacaccttcatgactgtccccgagaacgtaggcaaggaa
acggagcgcttcagggaactgctgctatttggtcgcaagaaggatgccctggaggcagcc
atgaagggagctctgtggggccacgccctgctgctggccagtaagatggacagccggaca
cacgctcgcgtcatgaccaggtttgcgaacagtctgcccatcaacgatcctctgcagaca
gtgtaccaactgatgtctgggaggatgcccgcctcagccacttgctgtggagatgagaag
tggggcgactggcgcccccatctggccatggtgctgtccaacctgacccacactttggac
ctggacacacgtaccatcaccaccatgggagacactctggcttccaaggggctaaccgat
gcggcccacttctgttacctgatggcccaggttggtttgggggtgtttaccaaaaagagc
accaagatggttctaatcggctcaaaccacagtctgtcgttcttccagtttgcgtctaac
gaagcgatccagaggacggaggcctatgagtatgcccagtctctgggctcccagccctgc
tccctgcccaacttccaggtgttcaagctgatctatgcgtgtcgcctggctgaggccggc
ctgtgtgctcaggccttccattactgtgaggttatctccaggagcgtgctcatgcagccg
tcctaccactctcctgtgttcaccagtcagctgatacagatgtctgagaagatgcgattc
ttcgatccacaactgaaggagaaggcagatcaggagctcttcaacgagccagagtggctg
attcatctgagacagctggatgggcagatgaggactggagtgattgcatacaatgcagac
agggatactcctcagcagtatgactgcagcacccccaattctgagttagaccagaccagc
ccgcctgagccatatgctcagcctctggacatggttggccacacctctgacaaccctctg
atgacatcactcatgcctggaccgcctcagcaaggggtgcagctgatgcctccagctccc
ccaactatcctccaggacggaatggtctcccagccaccacaccccaacgagggggtccag
ttttacccagtaccccccagtctccctggaccacctggccagatccctttatcagggttc
cctccccaaggctctggctttgtacaaccttaccaaccccagcagccccaaccggacaaa
aatgacatgtttcctggagcccagcaccagcagatggcgccaccacagcatcagcaacag
atgatgcccccaccacagcatcagcaacaaatgatgcccccacaaatgcagcagccacaa
aagatgccctctgacgattatcagctgacgggtccaccggaactacagcctcctcccatg
tccacctctccacagaggaacaccttcacgcctcagatggacttctatgaccaaatggct
cacatgggcccaggaagaagatccaggactacttcacagtcctcaatgcaaatgcagcct
ccaggtcgccgctcccgcaccatgtcggaatcttccacacactccggaggacgagagagg
agcaactcggcagccaagcagtcctctccgcctccaccctccatccctgagcaggccaag
aaggactcacctaaaaagggaggggggggtggtggtggcggttggctcaactggctctat
aggaaggggaagaatgaagcccaccttccggatgacaagaacaaatctattgtctgggac
gagaagaaacagaaatgggtcaacttggatgagccagaggaggagtacaagccccctcct
cctcctccctcgggcttccctaagatgctgggacccataccgggacaagggggtcctgga
ggtccccctactggtgggccgcctgtcaacatgttctccaggagagcaggtacaaagagc
cgctacgtggatgtcctgaacccaggtggaccccgtgccaagcccggtggatcggcacct
gccccgtcagacttctttgccccgttggctcccatgcccatgccagccaacctgtttgtg
cccggagcagaggaacagcagcccatggagggtaatgtcccagagacaggagggaaccag
gaacagagcgaccctaaccccagtgctgtgccacagatgttcaacccaacattgttaccg
cccggtccagtggggcctcctattgccgctgggtccccgccaggagaggtgcccctgact
ccgcagcctcctccccagggagctccaccctctggaggcgtgacgttctataaccccgcc
cagtttgcacaggcgagtactccatcgggacggcttctgtctgggaggttgggcggtcag
agggcatacccagtgctgaagtag
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