Salvelinus sp. IW2-2015 (Arctic char): 111962640
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Entry
111962640 CDS
T05762
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111962640
Transcription factors [BR:
salp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
111962640
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
111962640
NCBI-ProteinID:
XP_023841653
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Position
LG4q.1:29:complement(82944623..82976337)
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AA seq
632 aa
AA seq
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MNICDYLMADQRMDITSTMNEFMSPSSTELISSSINTQGMDYTRKRKGSTSDYQIDGFSF
DESSMDTDKDKLRDCGDHQGRIKNAREAHSQIEKRRRDKMNSFIDELAALVPTCNAMSRK
LDKLTVLRMAVQHMKTLRGAANPYTEANYKPSFLSDDELKHLILRAADGFLFVVGCDRGK
ILFVSESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPV
KTDITPGPSRLCSGARRSFFCRMKCNRPYVKTEDKDFPSTCSKKKADRKSFCTIHSTGYL
KSWPPTKMGLDDDNEPDNEGCNLSCLVAIGRLHPHIIPQPSHEDIRVKPTEYVSRHAIDG
KFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKI
KDGSFITLRSCWFSFMNPWTKEVEYIVSTNTVVSCSMLDGADPYPQSAASPTASMDSVLT
SEGGGRRAIQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRTRGSTPSSCGSSPLNISTPPP
DCSPGGKRIQNGGTPDLPSAGTLPGGPDSIGYPYSNQSIMSDNSHLSIDIMDEPGSSSPS
NDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttgtgattatctaatggcagaccaaagaatggacattacctctacgatgaat
gagttcatgtcccccagctccaccgagctgatcagcagctccatcaacacccaaggcatg
gactacacccgcaagaggaagggcagcacctccgactaccaaattgatggattttctttc
gacgagagcagtatggatacagacaaggataagcttagggattgtggtgatcatcagggg
cggatcaaaaatgccagggaggcacacagtcagattgagaagaggcgcagagacaagatg
aacagctttatagacgagctggcggcgctagtgcctacttgcaacgctatgtcccgcaag
ctggacaaactcacagtcctacgcatggctgtccagcatatgaagacattacgaggcgca
gcgaacccatacacagaggcgaactacaagccgtctttcctgtccgatgatgaattgaaa
cacttaatattgagggctgctgatggctttctgtttgtcgtcggatgcgatcgtgggaag
atcctcttcgtctctgagtctgtttacaagatcctcaactatagccagaacgacctaatt
ggccagagtctttttgattacctgcatcctaaagacatcgccaaagtcaaggagcaactg
tcgtcatcggatacagcaccccgggagcgactcatcgacgccaaaactggcctgccagtg
aagactgacattacccctgggccgtctagactgtgctccggagccagacgttctttcttc
tgccggatgaaatgtaaccggccctacgtcaaaacggaggacaaggacttcccctccacc
tgctcaaaaaagaaagccgaccgcaagagcttctgcacgatccacagtactggctacctg
aagagctggccgcccaccaagatgggtttagacgatgacaacgagcccgacaacgagggc
tgtaacctcagctgcctggtggccatcggccggctgcacccccacatcatcccccagccc
tcacatgaggacatccgcgtcaaacccactgaatacgtctcccgccatgccatcgacggg
aagttcgtctttgttgaccagagggccacagccattcttgcgtacttaccccaggagctt
ctaggcacctccttctacgagtattttcatcaggatgatattggccacctggcagaatgt
cacagacaagtgctgcagatgagagaaaagatcaacacaaactgttacaagttcaagatt
aaagatggctccttcatcacgctgagaagctgctggtttagtttcatgaatccctggacc
aaagaggtggagtacattgtctccacaaacacagtggtctcatgcagtatgctagacggt
gcagacccctatcctcagtctgctgcttcccccacagcctctatggacagtgtgctgacg
tcagaaggtggagggagacgggctattcagacggtgccaggcatccctggtggaacacgg
gcaggtgccggcaagatcggccgtatgatcgcagaggaggtgatggagattcagaggacc
agaggctcaacaccctctagctgtggctccagccccctgaacatcagcaccccccctcca
gactgctctccagggggcaagaggattcaaaatggtgggacaccagaccttccgtcggca
ggaacgctaccaggaggacctgactccattggatacccatactccaaccagtccattatg
agtgacaactctcatctcagcattgacatcatggacgagccaggctccagcagccccagt
aacgatgaggcagccatggctgtgataatgagtctcctggaggctgacgcaggccttggg
ggccccgtggactttagtgacttaccctggcccttgtga
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