Salvelinus sp. IW2-2015 (Arctic char): 111962673
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Entry
111962673 CDS
T05762
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111962673
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
111962673
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
111962673
NCBI-ProteinID:
XP_023841698
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Position
LG4q.1:29:84526711..84546646
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AA seq
467 aa
AA seq
DB search
MPQKEYYNRATWESGVASMMQNKVYDYNEGHSGVNQLGGVFVNGRPLPDTTRQKIVELAH
SGARPCDISRILQTHGDAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVAT
PEVVGKIAVYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSLSVSSINRVLRNLASEKQ
QMGADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNPDGCPQSDGGGENTNSISSNGE
DSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ
VWFSNRRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQPIPQTTAPGWMSFSSGSM
LGRPDTALTNTYSALPPMPSFTMANNLPMQAPVSSQTSYSCMLPTSPSVNGRSYDTYTPP
HMQAHMNSQSMAGSGGNSTGLISPGVSVPVQVPGSEADMSQYWPRLQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaatactataaccgggccacgtgggaatctggcgtcgcgtccatgatg
caaaacaaggtgtatgactataacgaaggtcacagcggagtgaatcagcttggcggagtg
ttcgtcaacggcagacccctgcccgacaccaccagacagaaaatagtcgagcttgctcac
agtggcgcgcggccgtgcgatatatccaggattctgcagacccatggtgatgcaaaagtt
caagtgctggacaatgaaaacgtgtcaaacggctgtgtgagtaagattctgggcagatac
tatgaaaccggctccatcagaccaagggcgatcgggggtagcaaaccaagagtagcaact
cccgaggtggtcggaaaaattgcagtatacaagagggagtgcccttcaatcttcgcctgg
gaaattcgtgacagactgctatccgagggggtctgcacaaacgataatatacccagtgta
agttcattgagtgtgtcgtcgataaacagagtcctccgcaacctggctagcgagaagcaa
cagatgggcgcagatggcatgtatgagaagttgagaatgctgaacggtcagactgggacg
tgggggacccggccgggctggtaccccggaacctcagtgccaggacagcccaacccagat
ggttgtccacagtcagacggtggaggtgagaacactaattcaataagttcgaatggagaa
gactcggatgagacccaaatgagacttcagctcaaaagaaaactgcaaaggaaccgcact
tcgttcacacaagaacagatagaagcgcttgagaaagagtttgaaagaactcactatcca
gatgttttcgcaagggaaagacttgctgcaaaaattgacctcccagaggccagaatacag
gtgtggttttcaaataggagggcaaagtggaggagggaggagaaactccggaatcaaagg
cgacaagccagtaactcctccagtcacatccctatcagcagcagtttcagcaccagtgtc
taccagcccatcccacagaccacagcaccaggttggatgtcgttctcctcaggatccatg
ttgggaagaccagacacagcccttacaaacacatacagtgccctgccacctatgccaagc
ttcaccatggccaacaacctgcctatgcaagcccctgtgtccagccagacctcctactcc
tgcatgctgcccaccagtccctcagtcaacggacggagctacgacacgtacacccctcct
catatgcaggcacatatgaacagccaatcaatggctggttcaggtggcaactcaacaggt
ctcatctctcctggagtatctgttcctgttcaagtcccaggcagtgaagcagacatgtcc
cagtactggcccaggctacagtag
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