Salvelinus sp. IW2-2015 (Arctic char): 111962693
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Entry
111962693 CDS
T05762
Symbol
ankrd27
Name
(RefSeq) ankyrin repeat domain-containing protein 27 isoform X1
KO
K20175
ankyrin repeat domain-containing protein 27
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111962693 (ankrd27)
Membrane trafficking [BR:
salp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111962693 (ankrd27)
Others
Specific organelles associated proteins
Melanosome
111962693 (ankrd27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
VPS9
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
111962693
NCBI-ProteinID:
XP_023841744
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All DBs
Position
LG4q.1:29:85317575..85343357
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AA seq
1068 aa
AA seq
DB search
MAVYDENLLKNPFYLALEKQRPDLCSRVAELHGIVLVPCCGSLTLGAYTAAQFETYVLHP
SGEGYQTVDGKELTIQDSLVRLGLGFQAPANVPILFEETFYNEKEQSYSILCIARPIDTD
QSPVEVTPSPAPYYLKNVEDVREFLGCHVEKLDKFISSFCHSFKEQEKKGLRHHIDSVNS
LYTKCLQCLLRDSRLKLLVKQELQMTLLKQAVEMYIHHGIHDFIFNFVGTLEASQDSAFN
KTTRGLQDLQQKDFGVKSEFSINIPRAKRELSQLNRCTSPLHKLLCLRKVSLTIMQSPSH
SVSLEALCADDLLSVILYLLVKTEIPNWMANLSYIKNFHFCNSTKEELSYCLTSFEAAVE
FIRQGNFGLSQGRVGLGDLNDKVHFTQKINLLSQNSATPIDRLFQHIANGNEVEVQRVLS
ENQSDRVKGCHPLCSCDHCELRLSGSLNDPSIITPFSRDDRGYTPLHIAAICGQSLLIDL
LVSKGALVNATDYHALSPLHLSCQKGYQRVTLLLLHYKAYSGAQDNNGNTPLHLACMYGH
EDCVKALVYYDLHMCRLNIQNDKGDTPLHIAARWGYEGIIEVLLQNGASTTIYNKVNDSP
LQCALNSKILTLLELSHNVSHRRENNDSPNRSPQASDCSSRRSSVSSTTSQSAEARPDGD
RVRHKEVEKLLRAVADGDIEMVRYLLEWLDEEPEEQHAGLPSWTELCHPLCQCPHCGPTQ
KKLACLQASGLSVNSSSVDGFTPLHVAALHGHTALVSLFSRHEANVDARNSQSATPLHLA
SQNNHIQVVTSLLECNAKLNKKDHYGNTPLIHACLRGHLDTATILLQSNASVNLSNNQGN
TALHEAVRGGHLVLVELLLQAGALVHMRNRRQRTALDCGKETGGKNTEILRILQKASGLS
PDAEPIKLLSVPKGALAHSFVQRFKLHQHNTNGRCQKLAQSINRVEQMKKGLPSVPSINS
PTAQRRKLRRGVTLESSGPFSSSPEGSPPPGYHRDSERVLSHCHTVDTEHPLFPQWARDL
RHTGEVKVDTHVAEDRSHTDTPGEPDILDVSCSQLMAVQIHTHSQRPL
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtatgatgagaacctcctgaagaaccctttttacctggcactggagaagcag
agacccgacctgtgcagcagagtggcagagctacatggcattgttttggtgccatgctgt
ggaagcctaacccttggtgcatacacagcagcccagtttgaaacctacgttttacaccca
tctggagaagggtatcagactgtagatggaaaggagctgaccatccaggacagcttggtg
agactgggcttagggttccaggccccagccaatgtgcccatcctgtttgaggagaccttc
tacaatgagaaggagcagagctacagtatcctctgtatcgccaggcccatcgacaccgac
caaagcccagtggaggtgacgcccagcccagccccgtactatctgaagaatgtggaggat
gtcagggagttcctgggctgccatgttgagaaactggacaagttcatcagcagcttttgc
cactcatttaaggagcaggaaaagaagggactgcgacaccacatcgactctgtgaattct
ctttatactaaatgtcttcagtgcctgttgagagactcgcgcctgaaattgctggtcaaa
caggagctccagatgactctcctcaaacaggcggttgagatgtatatacatcatggtatc
catgatttcatctttaattttgtggggactcttgaagccagccaggattctgccttcaac
aaaaccaccagaggcctgcaggacctgcagcagaaagactttggggtcaaatctgaattt
agtataaatatccctcgggccaagagggagctgagccagttgaaccgctgcacctctcct
ctacacaaactgctctgcctcaggaaggtgtctctcacaatcatgcagtcccccagccac
tccgttagcttagaggctctgtgtgcagacgaccttctgtctgtgattctgtacttactg
gtgaagacggaaatccccaattggatggccaacctgagctacatcaagaacttccatttc
tgtaattccaccaaggaggagctgagctactgcctgacgtcgttcgaggccgccgtggag
ttcatcagacagggaaacttcggcctgagccagggacgcgtgggcttaggtgacctgaac
gacaaagtgcatttcacccagaagataaacctgctctcccagaactctgctacccccata
gaccgtctgtttcagcacatagccaatggtaacgaggtggaggtccagcgtgtgttgagt
gagaaccagagtgacagggtaaaggggtgccaccccctctgctcctgtgaccactgtgag
ctccgtctctctgggagcctgaatgacccctccatcataactccattctctcgagacgac
aggggatacactccacttcacatcgctgctatctgcggtcagtccctgttgatcgacctg
ctagtgtctaagggagctctggtgaatgccacagactaccatgccctctcacccctacac
ctctcctgccagaagggctaccagcgagtcacgctgctgctcttgcactataaggcttac
tccggtgcccaggataacaatggcaacactcctctgcacctggcctgtatgtacggacac
gaggattgtgttaaagccctggtgtactacgacctgcacatgtgccgtctgaacatccag
aatgacaaaggcgacacccccctgcacatcgcagcccggtggggctacgagggcatcatt
gaggtgctgctgcagaacggagccagcaccaccatctacaacaaggtcaacgactctcca
ctacaatgtgccctcaactctaagattctgacgctattggagttgtcccacaacgtctct
catagaagagagaacaatgattccccaaaccgttccccccaggcctctgactgcagcagc
cgccgctcctctgtttccagcaccacctcccagagcgccgaggccagacccgacggagac
agggtccgacacaaagaggtggagaagttgcttcgtgcggtggcggatggagacatagag
atggtgcggtacctgttggagtggttggacgaggaaccagaggagcagcatgcagggctg
ccatcctggacagaactgtgccacccactgtgccagtgtccacactgtggaccaacacag
aagaagttggcgtgcctgcaggccagtggtctgagtgtgaacagcagtagtgtggatggc
ttcactcccctccacgtcgcagcgctccatggtcacacagccctggtgtccctgttcagc
cgccacgaggccaatgttgacgcacgcaacagccagagcgccacgccactgcacctggcc
agccagaacaaccacatacaggtagtgacatcactgctggagtgcaacgccaagctgaat
aagaaggatcactatggcaacactcctctgatccacgcctgcctgagaggtcacctggac
acagccactatcctgctacagagcaatgcgtcagtgaacctgtccaacaaccaggggaac
acggccctgcatgaggctgtgaggggaggtcacctggttctggtggagctgttactgcag
gctggagccctggtccacatgaggaaccggagacagaggacagcactggactgtggcaag
gagactgggggcaagaacactgagatcctgaggattcttcagaaggcttctggactctcc
cctgatgctgaaccaatcaaactgctctctgtgcccaagggggctttggcccattcattt
gtccagaggttcaagctccatcagcataataccaatggaagatgtcagaagctggcccag
tcaatcaacagagttgagcagatgaagaaaggtcttcccagtgtgccttccatcaactca
cccactgcccagaggaggaagctgagacggggggtgaccctggagagcagtggacctttc
agctccagcccagagggaagccccccgcctgggtaccacagggacagcgagagggtcctg
agtcactgtcacaccgtggacacagagcaccccctattccctcagtgggcccgggacctg
agacacacaggagaggttaaggtggacacacatgtagccgaagaccgttcacacacagac
actcccggtgagcctgacatacttgacgtgtcatgttcacagctgatggccgttcaaata
cacacacacagccaacgacccctctaa
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