Salvelinus sp. IW2-2015 (Arctic char): 111962771
Help
Entry
111962771 CDS
T05762
Name
(RefSeq) pseudouridine-metabolizing bifunctional protein C1861.05
KO
K16330
pseudouridylate synthase / pseudouridine kinase [EC:
4.2.1.70
2.7.1.83
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00240
Pyrimidine metabolism
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
111962771
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.83 pseudouridine kinase
111962771
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
111962771
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Indigoidine_A
PfkB
Ysc84
Motif
Other DBs
NCBI-GeneID:
111962771
NCBI-ProteinID:
XP_023841851
LinkDB
All DBs
Position
LG4q.1:29:89512010..89529460
Genome browser
AA seq
715 aa
AA seq
DB search
MKLSVSLRYSELRLLKEVSAQLLKRGISTFHSRLCKNDGLFLVHPAVSQALAENRPVVAL
ESTIITHGMPYPHNLSTAKAVEAIVRSEGAIPATVGLLQGRVHVGLSSEELDYLARSKTS
LKVSRRDLPYAISKGLCGGTTVSGTMIAAHRAGIHVFVTGGVGGVHRDGENSMDISADLT
ELGRTPIAVVSAGVKSILDIGPTLEYLETQGVCVATFGTSMNFPAFFSPQSGFTSPYHVN
NAEEAADLIAGNLSLGLQSGLLLAVPIPKEHAAAGQQIENAIQAALAEANVKGIRGRDLT
PFILQKVNELTRGKSLQANIALIHNNARVGSQIACALSKRMQKKTWTPAPHAKEREKDSD
SQPNIVVIGGVNVDFIAKGKTDKLVFGQTNPGSVCQSFGGVGKNLADSLSRMGQRPLFIS
AIGTDSHSDAVLNYCRHMNTSGVAVLKEQRTATYCAVITESGDLSLGLGDMDIHQQITEQ
YVAQFEDKLSTASLMCLDGNIPISTINYVCSVAKKHAVPVWYEPTDCDKACKPFLSDSWK
ALAYTSPNLAELCTMNKALGLPTPAVLPSSVEEVLSCAMDLARPLLDHLQCVVVTLGAMG
VLLCGEHNAGSVDLQPRRGTRKGRLCAVHYSALAHTAAETVNVSGAGDSLAGGILAGMFQ
SRDTHSCVRMGLLAARLSLASPHPVCTTLTTDSVDPNKVQPPQSWPQPNLLWMEE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaagtgtttcccttagatattctgagttgaggttgctgaaggaagtatcggca
caactcctaaaacgtggcatctcaacatttcacagtagattatgcaaaaacgatggtctc
ttccttgtccatccggcagtatcccaggcattggcagaaaacagaccagtggtggcgcta
gagagcaccatcatcacccatggcatgccatacccacacaacctgagcacagccaaagcg
gtagaagccatagtaaggtcagagggagccattcctgccactgttgggctgctccagggg
agggttcatgtagggttgtcttcagaagaactggactacctagcacggagtaagacgtcg
ctgaaagtgtcccgccgagacctgccctacgccatcagcaagggtctctgtggtggcact
acggtttcaggcaccatgatagcagcacacagagccggtatccatgtctttgtcactggg
ggtgttggaggagtgcaccgagatggagagaatagtatggatatcagtgcagatctgaca
gagctaggcaggactcccattgctgtggtctcagctggagtgaagtccatcctcgacatt
gggcccaccttggagtacttggagacacagggtgtgtgtgtcgccacatttgggacctcc
atgaatttccccgctttcttctctccacaaagtgggtttacctccccttaccacgtcaac
aatgctgaggaggctgcagatctcattgcgggtaacctgtccctgggtctacagagcggc
ctgctgctggctgtgcccatccctaaggagcatgcagcagctggacaacagattgagaac
gctatacaagctgcactggcagaggccaatgttaaaggtatcagaggaagagatttgacg
cccttcatccttcaaaaggtcaacgaactgacccgtggaaagtccctccaggctaatatc
gctctcattcataataatgccagggtaggcagtcagatagcctgtgcactgtctaaacga
atgcagaagaagacttggacacctgctcctcacgcaaaggagagagagaaagattcggac
tctcagccaaacattgttgtcataggtggtgtgaatgtggattttattgccaaggggaaa
acagataagctagtgtttggacagacgaatcctggaagtgtctgccagtcatttggtgga
gtaggaaagaaccttgctgactctctgagcagaatgggccaaagacctctcttcatctca
gctattggaactgactctcacagtgatgctgtgctgaactactgtcggcacatgaatacc
agtggtgttgctgtacttaaggagcagcggaccgctacttattgtgccgtgatcactgag
agcggggatctgagtctgggattaggcgacatggacattcaccagcaaatcacagagcag
tatgtggcccagtttgaggacaagctctcaacagcctcactcatgtgtctggacggcaat
atacccatctccaccatcaactatgtttgctctgtcgccaagaagcatgcagtgccagtg
tggtatgagccaactgattgtgacaaggcctgcaagcctttcctgtcagacagctggaaa
gccctggcctacacctcccccaacctggctgagctgtgtaccatgaacaaggcattgggc
ctcccgacacctgcagtgctgcctagctctgtggaggaagtgctgagctgtgccatggat
ctcgcacgccccctgctggaccacctgcagtgtgtggtggtgaccctgggggccatggga
gtgctgctgtgtggagaacataacgctgggtctgtagacctgcagcctaggagaggaaca
aggaagggtcggctatgtgccgtccactactctgctctggctcacaccgcagccgaaacg
gtgaatgtctcaggagccggagatagtcttgcaggtgggatattggctggtatgttccag
agcagagacactcacagctgtgttaggatggggctcctggcagcacgcctgtcactggcc
tccccacatcccgtctgcaccactctgaccacagactctgtggacccaaacaaggtccaa
ccaccccaatcctggcctcaacccaacctcctgtggatggaggagtga
DBGET
integrated database retrieval system
