Salvelinus sp. IW2-2015 (Arctic char): 111962815
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Entry
111962815 CDS
T05762
Symbol
itga2
Name
(RefSeq) integrin alpha-2
KO
K06481
integrin alpha 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03271
Virion - Rotavirus
salp04145
Phagosome
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
salp04810
Regulation of actin cytoskeleton
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
111962815 (itga2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111962815 (itga2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111962815 (itga2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
111962815 (itga2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111962815 (itga2)
04810 Regulation of actin cytoskeleton
111962815 (itga2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111962815 (itga2)
04515 Cell adhesion molecules [BR:
salp04515
]
111962815 (itga2)
04090 CD molecules [BR:
salp04090
]
111962815 (itga2)
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111962815 (itga2)
Exosomal proteins of bladder cancer cells
111962815 (itga2)
Cell adhesion molecules [BR:
salp04515
]
Integrins
Integrin alpha subunits
111962815 (itga2)
CD molecules [BR:
salp04090
]
Proteins
111962815 (itga2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
ITGAX-like_Ig_3
FG-GAP_2
Integrin_alpha
FN3_IL27B_N
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
111962815
NCBI-ProteinID:
XP_023841918
LinkDB
All DBs
Position
LG4q.1:29:complement(4825151..4847781)
Genome browser
AA seq
1099 aa
AA seq
DB search
MSYSADSVSISTVKNINVNMSLGLTLTRTATQDTFMTCGPLWAQKCGSQYYYPGICAEVS
PLFNPLSSFSPALQTCGGPMDIAIIVDGSNSIYPWPPVVAFLKKLLENLDIGPDNTQASI
IQYGVEPVVEFHLNAYKTKDSIIAAAANILQREGLETNTFRAIEFARQNAFLPGNGARPG
ASKVMVVVTDGESHDKNLRDDVIRKCESEKITRFGIAVLGYYIRNDIDTKNLIAEIKSIA
STPTDRYFFNVSAEEALLEIAGSLGDRIFNIEGTGKGGDFQMEMSQVGFSAHQTKKQNMM
MLGAVGAYGWSGTVVHYTTQKSDIFPKTTFEKILEDRNHSSLLGYSVTTLNDGSIEYYVA
GAPRSNHTGQVIVYIINGKGQPTVIDSQRGEQIGSYYGSVLCPLDVDKDGVSDLLLVGAP
MFMNEQQKEIGKVHLLSFTKGILSVQGXLEGPSPXXNARFGMSISAVPDLNMDGYSDVVV
GAPLEDNNKGVIYVFNGDKKRLRTQYSQKILGSKLDTALRYFGRSMDASTDLNDDTIPDV
SVGAYGMVVQLWSRGLAVVTARATFNPDTVSILSKTCRVSGRLVSCFNTSVCFSATFRPK
IPVGPVAVRFNLTLDAELQSSRATSRGQFRNSERVMQKDIRVSTGEVCETLEVFVQEAPD
FVSSIGLRVDITLQDPDSSPVLDVLSPTAWEFFIPFSKDCGSDEVCLSDLLLKLKKGEMI
PSSSKMLVSFKDKRLSFTVSVTNKKENAYNTRVTATYSKNLFYASIXPPSDGTEVKCTST
KESLTLSCQVGYPALRQNQEVTFGINFDFNLNQLQTEADVHFDALSDSTEANPSDNQASI
SIPVHYDSEISLSREANLNFYVVDMDNEANTAVNTFNDIGPEFKFSLKVSTGNFPVSLAY
LTVSLPSATARGNPLLYVTGVKTEPAGEVSCDVTSLVNPLKISEKPYTASFSKENLMGTE
NLNCKTAKCQPMKCVLKDMGIKSDFFVNVTTRIWNGTFAASSFQSTVLTVSTEIETSZPE
LLVXSHRHLTVGVTISKPGVKGEVPVGVIAGSVIGGLLLLALVIGLLWKFGFFRRKYKQL
MQNPEEDEAETEGLENTAA
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgtcttactctgcagactcagtcagcatatcaacagtgaagaacatcaatgtcaacatg
agtctggggctaaccctcacccgcacagctacacaagatacattcatgacatgtggacct
ctgtgggctcagaagtgtggcagtcagtattattacccagggatctgtgcagaagtcagc
cctctcttcaaccccctgtcttcgttctcacctgcccttcaaacttgtgggggtccaatg
gatattgctattattgtggatggatccaacagtatatatccctggccaccagttgtggct
ttcctcaagaaactgttggagaatttagatattggaccggataatactcaggcaagtatt
atacagtacggggttgagccagtcgttgaattccatctgaacgcctacaaaaccaaagac
tcgatcattgcggctgcagcgaacattctccagagggaaggcctggagacaaacaccttc
cgcgccattgaatttgctagacagaacgcgttcctgcccgggaacggggctcgacccgga
gccagcaaagtgatggtggtggtgacggacggagagtctcacgacaagaacctccgagac
gacgtcatcaggaagtgtgagagtgagaagatcacccgctttggtattgctgtccttggg
tattacataaggaatgacattgacactaagaacctgattgctgagatcaagtccatcgcc
agtaccccgacagayaggtacttcttcaatgtgtcagctgaggaggctctgctsgagatc
gctggatctctgggagaccgcatcttcaacattgagggtactgggaaaggtggtgacttt
cagatggagatgtcccaagtgggattcagtgcccaccaaaccaagaagcagaacatgatg
atgctgggtgcagtgggggcctacggctggagtggtactgtggttcactacactacccag
aaatcggacatcttccccaagacaacctttgagaaaatcctagaggacagaaaccacagc
tcactattaggctactctgtgacaacgctgaatgatgggagcatagagtactaygtggct
ggcgctcctcggtccaaccacactggacaggtcatagtgtacatcatcaacggcaaggga
caacccaccgtcatcgactcccagagaggrgagcagataggctcctactacggcagcgta
ctctgtcccctggatgtggataaagatggtgtgtctgatctactactggttggagctccc
atgttcatgaacgaacagcagaaggagattgggaaagtccatctcctctccttcactaag
ggcatcctaagtgtccaggggtycctggagggtccgtccccrgwggasaacgctcgtttt
gggatgtctatctcagcggtgcctgacctcaacatggatggctacagtgatgtggtggtg
ggagccccactggaagacaacaacaaaggtgtratctatgtcttcaacggggacaagaag
agactcaggacacagtattcccagaagatcctgggctccaagctggacactgcgttgcgg
tacttcgggaggtccatggacgccagcaccgacttaaacgatgacaccataccagatgtc
tcagtgggggcttatggaatggtggtccagctctggtctcggggtctggccgtggtgaca
gcgagggcaaccttcaaccctgacacggtcagcatcctgagtaagacgtgcagggtgagt
gggaggctggtgtcctgcttcaacacctccgtctgtttcagcgccaccttcaggcccaag
atacctgtaggacctgtggctgtcaggttcaacctgaccctggatgctgagctccagtcg
tcccgtgccacctccagaggtcagttcaggaactctgagagagtcatgcagaaagacatc
agggtttccaccggggaggtctgtgagacactagaggtctttgttcaggaggcccctgac
tttgtgagctcaatcggtctgcgtgtggacatcactctgcaggacccagactccagtcct
gttctggatgttctcagtcccaccgcctgggagttctttatcccattctccaaagactgt
ggctctgacgaggtgtgtttgagtgacctgctcttgaagttgaagaaaggagagatgatt
cccagctcgtctaagatgttggtcagctttaaggacaagaggctctccttcactgtgtct
gtgaccaacaagaaggagaatgcgtacaacacccgagtcacggccacatactccaaaaac
ctcttctaygcctccatcamtcctccaagtgatggaacagaggtgaagtgcacctccacc
aaagagtctcttaccctctcatgccaggtgggatacccagctttaaggcagaaccaagag
gtgacatttggaatcaactttgacttcaacctgaatcaactgcagaccgaagccgatgtg
cactttgatgctctaagtgacagcacagaggcgaacccgtcagacaaccaagcctctatc
tccatccccgtccactatgactccgagatctccctctccagggaagcaaatctcaatttc
tatgtggttgacatggacaatgaggcgaayaccgcagttaataccttcaatgacatcggt
cctgagttcaaattctctytgaaggtctctacagggaacttcccagtcagtctggcctac
ctcacagtctcactgcccagtgctacagcaagagggaacccattgctgtatgtgaccgga
gtcaaaacggaacctgctggcgaagtgagctgtgacgtaaccagcctcgtcaaccctctg
aagatcagtgagaagccgtacacagcatccttctccaaggagaacctcatgggcacagag
aatctgaactgtaagacagccaagtgccagcctatgaaatgtgtcctgaaagacatgggg
ataaagagcgatttctttgtgaacgtgaccacgcggatatggaacggtacctttgctgct
tcatccttccagtccaccgtgctgactgtgagcacagagatagagacytcysagcctgaa
ctgctggtcrtctctcacaggcacctgacggttggcgtcaccatcagtaaaccaggggtg
aaaggagaggtgcctgtaggcgttattgcgggcagtgtgattggaggcctgcttctattg
gctctggtcattggcttgctttggaagtttggcttcttccggagaaagtacaagcagctg
atgcagaaccctgaggaggatgaggcagagaccgagggactggagaacacagcggcgtga
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integrated database retrieval system
