Salvelinus sp. IW2-2015 (Arctic char): 111962964
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Entry
111962964 CDS
T05762
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111962964
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
111962964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF_3
EGF
hEGF
DUF7630
Motif
Other DBs
NCBI-GeneID:
111962964
NCBI-ProteinID:
XP_023841971
LinkDB
All DBs
Position
LG4q.2:complement(9592297..9745667)
Genome browser
AA seq
1604 aa
AA seq
DB search
MLSEWKKGRFKQHACGKPLPGLTKQDDCCGSVGASWGLNKCTECPTKPAYAVIANGQVEC
PKGYKRMNMTHCQDINECLMNGICKNAECLNTRGSYRCTCKPGYMLDPARSHCVSDKAVS
DQRGMCYRSASVGTCSLPLAQHITKQICCCSRVGKAWGTACERCPLPDTDHFKEICPAGH
GYTYSRSDVQISLRQLEEEELRRTGVSWEAQNPSHPQLPQQPAQPPQQLPHVPQTPQIPQ
YPYHRQPHQPQHPQHPHQPQHPQEIPHHPQTPQYPHQSHKPHHPQHPQELPQTPQIPQYP
HTPQQPQHPLHPDPDNQHPAGETPSQPQDVEILNPRPVATDSPLKYPDVVEKVTPDSPIN
LGPESEGKDTASINVATQVTDIDKCSITPTICGHGLCVPVQTGYTCYCDPGYKLSALQTN
CIDVNECEGDPCGGKGRCVNTFGSYTCQCYSGYSQVITQNRKFCQDINECDMANKCQDGD
CVNTEGSYTCECKSGYAKSRKGQCEDVDECQGPSSCPSGRCVNTPGSFQCQACGPGFRAA
SGRCLDVNECLDQSVCAHGRCVNSEGSYSCSCYQGYQASLDNSSCQDVDECLLPGACLHG
RCVNLDGSHRCSCNPGYQSAPDGRACEDVDECATPVCPAGICTNSEGSYSCKNCRPGFQR
SADGQRCEDVDECSKADMCLGGVCANTEGSFTCTRCKDGYRVSQDRQRCEDIDECQSGSV
CANGICLNSEGSFSCITCPSGYSVSLDGELCEDIDECELPTTCPRGTCTNTEGSFTCTTC
GSGYRVTEDGLECDDVDECLVANVCPGQLCRNSPGSFSCSSCGTGFTLSEDGSHCQDINE
CLSPGVCPMGVCSNTEGSYSCMTCDLGFTLAPNGLTCEDINECEDHGLCLAGQCTNNPGS
YSCSCPPGLEMVDGTSCRDVDECQSGGICGDGDCLNTEGSYLCICPDGYTTGTTDGIGCQ
DVDECSKDGVCSHGQCLNMDGSYICLCETGFKYSADTADCEDQNECKEFGSSVCGTWRCE
NTIGSYRCFMGCQPGLYGQDNPDCDIDECVNETICGDHGFCENTDGSYRCRVTRAPATPL
VMPGPIACVVKIYSPIPVLSRADVNECEMSTALCGEALCENVDGSFLCICPSDNEEFDPI
TSQCRPQGEDAPPKPALPTEEQRKECYYNLNDANFCDNVLSRNTTKQECCCTVGAGWGDD
CEIHPCPVPGREEYDQLCPHGSGLLPQAVFSHSLEQQSFKDVDECKMFGPDICKNGRCSN
NFSSYSCFCRTGFYYDNIRLECVDYDECLTEKACVDGVCVNTAGSFDCFCSPPLVLDSTR
RHCVSVNTTEETHEPEEDIHLNICWQGLVDERMCAQPLIGRRTTYTECCCLYGVAWSEQC
AFCPRRDSDDYAAVCNLPRRGGSDSLRERPGYEYGPGVEGPEGPYVPPYWDNYGGGPITG
PGGTYYNPEDTQGIPLFTDNTNDYGSREGDIEPPLRVPVHRPREFQPHPVDSYNDRFDGF
EGLRAEECGILNGCENGRCVRVREGYTCDCFDGYELDLTKMACIDINECEDISDSVALCK
NGACTNTEGSYKCTCLPGFQASAKPHECIPEVPVAGFRERVAGK
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcagagtggaaaaagggaaggtttaaacaacatgcttgtgggaagcctcttccg
ggcctgaccaaacaggatgactgctgtggaagtgtgggtgcctcatggggcctgaacaag
tgcacagagtgtccaaccaaaccagcgtatgcagtgattgcgaacgggcaagtggaatgc
cccaagggttacaaaaggatgaacatgactcattgtcaagacatcaacgagtgtctgatg
aatgggatctgtaagaacgctgagtgtctgaataccagaggaagctacagatgcacctgt
aaaccaggctacatgctggaccctgctaggagccactgtgtctcggacaaggctgtgtcg
gaccagagggggatgtgttaccgctcagcgtcagtggggacctgctctctgcctctcgct
cagcacattaccaaacagatctgctgctgcagccgtgtgggcaaggcctggggcacggcc
tgcgagaggtgccctctgccagacacagaccatttcaaggagatctgtcccgctggccac
ggctacacatactcgcgctccgacgtgcagatctccctgagacagctggaggaagaggag
ctgaggaggactggcgtttcctgggaggcccaaaaccctagccacccccaactgccccag
cagccagctcagcccccacagcagctgccccacgtcccacagaccccacagatcccacag
tacccctaccaccgccaaccacatcaaccacagcatccacaacacccccaccaaccacaa
cacccacaggagataccccaccacccccagaccccacagtaccctcatcaatcccacaaa
ccccaccatccacagcacccccaagagctcccccagacgccccagatcccccagtaccct
cacaccccccaacaaccacaacaccctctccatccagacccagacaaccagcatccagct
ggggagacccccagccagcctcaagatgtggaaatattgaacccgcgtcctgttgcgact
gactccccattgaagtacccagatgtggtagagaaagtgactcctgactctcccatcaac
ctggggcctgaatctgagggcaaggacacagcctccatcaatgtggccactcaggtcaca
gatattgacaagtgctccatcactccaaccatatgtggccatgggctgtgcgtgccagtg
cagacaggctacacctgctactgtgaccccggctacaagctgagtgcactccagaccaac
tgcatcgatgtaaatgagtgtgagggggacccttgtggagggaagggccgatgtgtgaac
acctttggctcctacacctgccaatgctacagcggctacagccaggtcatcacccagaac
aggaagttctgccaggatataaatgagtgtgacatggccaacaagtgccaggatggtgac
tgtgtcaacacggagggatcttacacctgtgaatgcaagagtggctacgccaagtccagg
aaagggcagtgtgaagacgtagatgagtgccagggccccagctcgtgccccagtggaagg
tgtgtcaacaccccaggctccttccagtgccaggcctgtggccccgggttcagggctgcc
agcgggagatgtctggatgtcaacgagtgtttggaccaatcggtgtgcgcccatggtagg
tgtgtcaactccgagggctcctacagctgcagctgttaccaaggataccaggcctctctg
gacaacagcagttgccaagatgtggatgagtgtctgctccctggagcctgcctccatggc
aggtgtgtcaatctggatggctcccacaggtgcagctgtaaccctggttaccaaagcgct
cctgacggcagggcctgtgaagatgttgacgaatgtgctacacctgtgtgccccgcggga
atttgcaccaattccgaaggttcctactcatgcaagaactgccgacctggattccagcga
tcagcggatggacagagatgtgaagatgtggatgagtgctccaaggcagacatgtgtctg
ggaggggtgtgtgccaacacagagggctccttcacctgcacccgctgtaaagacggatac
agggtgtcccaggacaggcagaggtgtgaggatattgatgagtgccagtctgggtctgtg
tgtgctaacgggatctgtctgaactctgagggctccttctcctgcatcacctgtccctca
ggctacagcgtctccctagacggagagctgtgtgaagatattgatgagtgtgagctgccc
actacgtgccccaggggaacatgcaccaacactgagggttccttcacctgcaccacctgt
gggtcaggctatagagtgactgaggatgggctggagtgtgatgatgtggatgagtgcttg
gtggctaacgtgtgcccaggccagctgtgtaggaacagtcctggatccttctcctgcagc
agctgtgggactggctttaccctgtctgaggacggctcccactgccaggacataaatgag
tgcctgtccccaggagtttgtcccatgggcgtttgcagcaacacagagggctcctactcc
tgtatgacctgtgaccttggcttcacgctggcgcccaatgggctcacctgtgaagacatc
aacgagtgtgaggaccacggtctgtgtctggcaggacagtgtaccaacaaccctggttca
tacagctgctcctgtcccccgggcctggagatggtggacgggacatcttgcagagatgtg
gatgagtgtcagtctggggggatctgtggagatggggactgtctaaacacagagggttcc
tacctctgcatctgccctgatggatacaccacaggcaccacagatggaattggctgccaa
gatgttgatgagtgcagcaaggatggcgtgtgctcccatggtcagtgtctaaacatggat
ggctcctacatctgcctttgtgagactggcttcaagtactctgcagacacagccgactgt
gaggatcagaatgagtgtaaggagtttggtagctcagtgtgtggcacctggcgctgtgag
aacaccattggctcataccgatgcttcatgggctgccagcctggcctgtacggacaggac
aacccagactgtgatattgatgagtgtgtgaatgagaccatctgtggggaccatggcttc
tgtgagaacacagacggctcctaccgttgtcgtgtgaccagggctccagcaacccccctg
gtgatgccggggcccatagcttgtgtggtaaaaatttactcccccatccccgtcctgtcc
cgtgcagacgtgaacgagtgtgagatgagcacggcgctgtgtggagaggccctgtgtgag
aacgtggacggcagcttcctgtgcatctgccccagcgacaatgaggaatttgatcccatc
accagccaatgccgcccgcagggtgaagatgctcctcctaagccagccttgcccactgag
gaacagaggaaggagtgttactacaacctgaacgatgctaacttctgtgacaatgtgctg
tctcgcaacaccaccaagcaggagtgctgctgtacagtgggggccggctggggggacgac
tgtgagatccacccctgcccagtcccagggagagaggagtatgaccagttgtgtccacat
ggaagtggtcttctgccccaagctgttttctcccacagcctggaacagcagagtttcaaa
gatgtggacgagtgtaagatgtttgggccagatatctgtaagaatggccgttgctctaac
aacttctcctcgtactcctgcttctgccgtacaggcttctactacgacaacatccggctg
gagtgtgtggattatgacgagtgcctgacagagaaggcgtgtgtggatggggtgtgtgtg
aacactgccggctctttcgactgtttctgcagtccccctctggttctggacagcacccgc
cgtcactgcgtcagcgtcaacaccaccgaggagactcatgagcctgaggaggacatccac
ctgaacatctgctggcagggcctggtagatgagcgtatgtgtgcccagcccctcatcggc
aggaggaccacttacacagagtgctgctgtctctatggagtggcctggagcgaacagtgt
gccttctgccccaggagggactctgatgactacgcagcagtgtgtaacctgccaaggaga
ggggggtctgacagtctacgagagaggccaggctatgagtacggtcctggggttgagggt
cctgaggggccctatgtccccccctactgggacaactatggaggagggcccatcactggg
cctgggggtacctactacaacccagaggacacccagggcatccccctgttcacagacaac
accaacgactatggctcccgagagggagacatagagccgccactacgtgtccctgtccac
cggccaagagagttccagcctcaccctgtagactcatacaatgaccgctttgatggcttc
gagggcctgcgagcagaggagtgtggcatcctgaacggctgtgagaatggccggtgtgtg
cgcgtgagggaaggttacacctgtgactgctttgatggatacgagcttgacctcaccaaa
atggcctgcatcgacataaacgagtgtgaggatatcagtgacagcgtggcgctgtgtaag
aacggggcctgtaccaacactgaggggtcgtacaagtgcacctgcctgcctggcttccag
gcctctgccaagccccatgaatgcatcccagaggtcccagtggctggctttagagagaga
gtggcagggaaatga
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