Salvelinus sp. IW2-2015 (Arctic char): 111963000
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Entry
111963000 CDS
T05762
Name
(RefSeq) laminin subunit beta-3-like
KO
K06244
laminin, beta 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111963000
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111963000
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
KASH_CCD
hEGF
GldM_1st
Tmemb_cc2
CDK5RAP3
DUF745
APG6_N
Filament
Motif
Other DBs
NCBI-GeneID:
111963000
NCBI-ProteinID:
XP_023841993
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Position
LG1:24093546..24116405
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AA seq
1152 aa
AA seq
DB search
MWILFQLAALTAVAATQRDCSRGACYPPMGDLLLGRDRQLHASSTCGLAGSEVFCTYFGQ
WRIKCCTCDSRNPSSQLAHTIQNVLSTTGPNRWWQARKDVSPVTLQLDLQNLFQLDTIIL
TFKGPHPSALVVERTLDNGQTWQPSHYMASDCRSAFPGIAMTMPRSLDQTYCYTLPPVPA
NSYQDQTIQFSPLRQFSSISVPNGQKIQEVSGLTGLRVKLTELGAISRLPGRTPSLFYAL
REMRVMGTCLCHGHANRCLQDTTAYQLPSTQVSAQCECQHNTAGVNCERCADLYNDLPWR
SAEEGNTHTCKRCECNNHAQRCRFDPSVYEASGWRSGGVCEGCLHHTTGPKCDRCAPGYQ
PNHRSSIDQPDACTRCHCSAEGAENGGRCDDVTGSCRCKMGYYGLTTXNPLGCTKCLCSA
EGSLSSVCDPVSGQCPCRPYHQGLTCELCSRGYWNPSSFRGCEPCRCDPTNSHGDXCDRN
TGQCQCRSGFGGRTCTECPDNTYGDPLIGCRPCQCAAGGMVPGGCDKRTGACRCRIGVIG
IRCDACSRGHVYSFPDCXVCPSCFFSLDSYIQNLTLGLERLSTRIPSRPGGSLPTGLGLR
IQALEATLIQMRDSLPLPTPSTRQVNDALFQLRRLRDQLDQVDGDLSPQGRGLELGSQLD
ELQALLGGLGLLYNAKRDALRNPINSNNAGAFSSIKNAYDESTDAAKIVEASGKTVDQSS
AVREDSLDLQNQVQPANTRDLEKLNQQLNTKPDLSPTAKQVCGSVRSAPCTPAQCDGELC
PAEGAPPCGRGESCIGALPLGTRAVRDAEEVKDRLQQLNGKITQAAAQIQKTQDTVNMVR
QSTDDLANQMRRARDDLEADLQETRYFVKELKDFLSDPLSDPTDISTVSEWILNAKLPLS
LAALKRKLQEIRALAAGLPDSKAVLDQAGPQLDTARRLLQEAQDARDAGLGVKDDVDGLL
DGFTAVEGSLSGLNDKVQDSLDIVEDISNSLTQTKAQLTPAVKALGEASALAEGMKPELE
GLKALVRSGDLLAQNAKGEANKANKEADSATRDLASLEKQLEQLRAAERTSGHGDGTGTT
GERLRKLQEEAGSLAQDTGDMMKALAGKADSLHSLQDEVLLKSQRLTGLDGKLRELLADM
RQKVKIFSTCQG
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtggattttattccagttagcagccctgacagcagtggctgcgacccagagggactgt
tctcggggggcctgttacccccctatgggagacctgctcctcggtagggaccgtcagctt
catgcctcctccacctgcggccttgccggctctgaggtcttttgcacctactttggacag
tggaggataaagtgctgtacctgtgactccaggaatccatccagtcagttagctcacacc
atccagaacgttctatccaccactggacccaacaggtggtggcaggcmaggaaagatgtg
agtccggttaccctacagttggacctacagaacctgtttcagctggacaccatcattctg
accttcaagggtccccatcctagtgcgctggtggtggagaggacgttggataatggtcaa
acctggcaaccgtcccactacatggcctcagactgtcgctcggccttccctggcattgcc
atgactatgccacgctctctggaccagacctactgctacaccctaccccccgtccccgct
aactcttaccaggaccagaccattcagttcagccccttgcgtcagttctctagcatcagc
gtccccaatgggcagaagattcaagaggtgtcaggattgacaggcctgcgggtgaagttg
actgagcttggtgctatttcccgcttgcccggccgcaccccttcgctgttttatgccctc
agagagatgagagtgatgggcacctgcctctgccacggccatgccaaccgctgtctgcag
gatactactgcctaccagctacctagcacacaggttagtgctcagtgtgagtgccagcac
aacacagcaggtgtaaactgtgagcgatgtgctgatctctacaacgacctgccctggaga
tctgcagaggagggaaacacacacacctgcaaacgttgtgagtgtaacaaccacgcccag
cggtgccgtttcgacccatctgtrtatgaggcgagcggatggaggagtgggggggtgtgt
gagggctgtctgcaccacacaaccgggcccaaatgtgaccgctgtgcccctggataccaa
cccaaccaccggagcagcatagaccagcctgatgcctgcacacgctgccattgtagtgca
gagggggcagagaatgggggtcggtgtgatgatgtcacagggtcgtgtcgctgcaagatg
ggatactatggcctgaccacctycaaccctctgggctgcacgaagtgcttgtgcagtgca
gagggctccctgtccagtgtgtgtgaccctgtgagcggtcagtgtccctgtcgaccttac
caccaggggctgacctgtgaactctgttcccgtggttactggaacccctcctccttccgc
ggctgtgagccctgtcgctgtgaccccaccaactcccatggtgacryctgcgaccggaat
acgggtcagtgtcagtgcaggtcagggttcggaggtcgtacctgtacagaatgccctgac
aacacttacggagaccccctcattggctgcagaccgtgtcagtgtgctgctggaggcatg
gtaccaggaggctgtgataagcgtacaggggcctgccggtgccgtattggtgtcataggt
attcgttgtgatgcctgtagccgtggccatgtttactcctttcctgactgtgawgtctgc
ccctcctgcttcttctctctggactcctacatccagaacctcaccctgggcctagagaga
ctctccaccagaatcccctctcgtcctggcggctcattgcccaccggtctcggtctccgc
atccaggccttggaggccactctcatccagatgcgtgactctctcccactcccaactccc
tctacgagacaagtcaacgacgccctctttcagctacgcagactaagggaccagttagat
caggtggatggggatctgtcaccccaaggcagaggcctcgagctgggctcacagctggac
gagttgcaggctctcctgggcggcctgggtctgctgtacaacgccaagagagatgctctc
aggaaccctatcaactccaacaatgcaggggccttctcttctataaagaatgcctatgac
gagtccacggatgcggcgaagattgtggaggctagtgggaagactgtagatcaatcttca
gcggtcagagaggattctcttgacctccagaaccaggttcaaccagcgaacaccagagac
ctggagaaactcaaccagcagctgaacaccaaacctgacctctcacccactgccaagcag
gtgtgtggcagtgtgcgctctgccccttgtacccctgcccagtgtgatggtgagctgtgc
cctgcggagggggcgccaccctgtggtcgtggcgagagttgcattggggctctgcctctg
gggacccgagctgtgagggatgctgaggaggtaaaggacagactgcagcagctcaatggg
aagatcacacaggctgctgcacagatccagaaaacacaggacacggtcaatatggtcaga
cagtccacggacgatctggccaatcagatgaggcgggccagggatgacttggaggcagat
ctgcaggagacaagatactttgttaaagagctgaaggacttcctgtcagaccctttgtca
gacccgacagacatcagcacggtgagtgaatggatcttgaacgcaaagctgcctctcagt
ctggcagctctgaagaggaagcttcaggagatcagagccctggcggcaggactcccagac
agcaaagcagttctggaccaggctggaccacagctcgacaccgcccggcgcctgctacag
gaggcccaggacgctagggatgctgggctgggtgtgaaggatgatgttgacgggctgctg
gatggcttcaccgccgtggagggctccctctctggcctgaacgacaaagtgcaggacagc
ctggacatagtggaagacatcagcaacagtctcacacagaccaaggcccagttgactccc
gcggtgaaggctctaggggaggcgtctgccctggctgaggggatgaaacctgagctggag
gggctcaaggcgctggtgcgctctggagatctgctggcccagaatgctaagggagaggcc
aataaggctaacaaggaggcagattctgcgaccagggacctggcgtccctggagaagcag
ctggagcagctgcgtgctgcagagaggaccagtggtcatggcgatgggacggggacgaca
ggtgagcgtctccggaagctgcaggaggaggctggttctctggcccaggacactggagac
atgatgaaggcactagcaggtaaagcagactctctgcatagtctacaggatgaggtccta
ctgaagtcccagaggctgaccggtctggacggcaaactgcgggaactcctggctgacatg
agacagaaggtcaagatyttctccacctgccagggctga
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