Salvelinus sp. IW2-2015 (Arctic char): 111963058
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Entry
111963058 CDS
T05762
Name
(RefSeq) vacuolar protein 8-like
KO
K08332
vacuolar protein 8
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111963058
03029 Mitochondrial biogenesis [BR:
salp03029
]
111963058
Membrane trafficking [BR:
salp04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
111963058
Other autophagy associated proteins
Micronucleophagy
111963058
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111963058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ARM_PUB
HEAT_2
HEAT
Cnd1
ZER1-like_2nd
V-ATPase_H_N
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
111963058
NCBI-ProteinID:
XP_023842046
LinkDB
All DBs
Position
LG4q.2:complement(25706160..25713565)
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AA seq
532 aa
AA seq
DB search
MATGICEKCAQLLKDFVAYVKRLPSELVQKITECIKNLSRCSCLRRKRATVASYISEQHE
RQAARALLBHLDTVDYPLPVALLEPYTALLLSNDMEVQRITTLSLVHLLVKNKVSKEQVI
ETGMLMPLLEMLQSGDPTVQCNSCQCIASLASSDSNREAIVSAEGVIPLLVLAKSYDPQV
QQNAVWALLNLTQSERTMGVLCQEGAIPVLALLLQSSNYEVQFYSCSALSNIATVPGHHP
KMLGIGDRFLLKSLLTLMSSSVQKNASQACRCLQILSGNVVTQEQLMYLNCVLPLKALLC
SATPPLTESAIALLSELATHQPNRDGLVNEGLVQVIGQLLLCHRSSSIINHSVVTITNLS
STSEGQQAVMDSECVTGLLKALVSSVTSEETVLCVTSCLHHLTSWDLLQSHLATKITPEH
VSSLVKFSAQMDNLELSYRSASIISKLKMNEHVIQLLTPHYAAISEYLLMYLKNQEVRFQ
QLSIVTLCNLKNDGEFSVLMSGSVLEKQLKRVHAQTEQTRQLLQAIQMPPSS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggaatatgtgaaaagtgtgcacaactgctaaaggacttcgttgcttatgta
aagagattgccatctgaacttgtacagaagataacggagtgtataaagaacctgtcaaga
tgtagctgtctgcggaggaagagagcaactgttgcatcctatatctcagagcagcacgag
agacaggctgctcgtgcactactgraccacctggacacagtggattatcctctacctgtt
gctctcctggagccatacacagccctactgctctctaatgacatggaggtacagaggatc
accactctgtccctggttcatctgctagtgaagaacaaagtgagtaaggagcaggtgatt
gagacagggatgctgatgcccctgctagagatgctccagtctggggaccccactgtccag
tgtaactcctgccaatgtattgcctcactggcctcctcagactcaaaccgggaagctatc
gtgtcagctgaaggggtgattccactactggttttagccaagtcttacgatccccaagtc
caacagaatgcagtctgggcccttttaaacctcacacagtctgagaggacgatgggagtg
ttatgtcaagaaggagccattcctgtactggcacttctgttgcagtcctccaactatgag
gtccagttctacagctgctctgccctgagcaatatagccactgtcccgggccatcatccc
aaaatgttgggcattggagaccgttttttgttgaagtctctgctgacactcatgtcctca
tcagtgcagaagaatgcatcccaagcttgcagatgcctccaaatcctttcagggaatgtt
gtgacccaggagcagctgatgtacctgaactgtgtgttgcctctgaaggccctgctgtgc
tctgctactccccctctgactgagtctgctatagcactactgtctgagctagccacacac
caacccaatagagatggcctggtgaatgagggcctggtacaggtgataggccagctgctc
ctctgtcacagatccagctccatcatcaaccacagtgttgttaccatcaccaacctcagc
agcaccagcgagggacagcaggctgttatggacagtgagtgtgtaacgggacttctcaag
gcccttgtgtccagtgtgacctcagaggagaccgttctgtgtgtcacttcctgtttacat
cacctgacaagctgggacttacttcagtctcatttggccacaaaaattactcctgaacat
gtttcaagtctggtgaagttctctgcacaaatggacaatctagagctgtcctataggtct
gcttccatcatcagcaaactaaagatgaacgaacatgtcattcaactactgacgccacat
tacgctgccatctctgaatatctcctgatgtacctcaagaaccaggaagtgcgattccaa
cagctgagtattgttactctatgcaacctcaagaatgacggagagttttcagtgctgatg
agtggtagtgtgctggagaagcagctaaaacgggtgcatgcacagacggagcagaccagg
cagttactgcaggcgattcagatgcctccatcctcctga
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integrated database retrieval system
