Salvelinus sp. IW2-2015 (Arctic char): 111963101
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Entry
111963101 CDS
T05762
Name
(RefSeq) peroxisome proliferator-activated receptor delta isoform X1
KO
K04504
peroxisome proliferator-activated receptor delta
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03320
PPAR signaling pathway
salp04148
Efferocytosis
salp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111963101
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111963101
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
111963101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111963101
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
salp03310
]
111963101
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111963101
Nuclear receptors [BR:
salp03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
111963101
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
HiaBD2
Motif
Other DBs
NCBI-GeneID:
111963101
NCBI-ProteinID:
XP_023842085
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Position
LG1:complement(24172540..24208885)
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AA seq
538 aa
AA seq
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MEGTRATILAPVRSDGPRRDRKRXVGGPVRKGGVCQNRTASPHGECTSDGEREPESALKE
LKPNPLSKGLGKWDTEGERGAEVSPEGEDVLCSWEMDSQDEEAQQQEKEEEKQKGSSNSH
STSNTDSPAPSSSCTDLSQTSSPSLSDQLFLGREEGTGAGINVECRICGDKASGFHYGVH
ACEGCKGFFRRTIRMKLEYERCERSCKIQKKSRNKCQYCRFQKCLLLGMSHDAIRYGRMP
EAEKRKLVAGLLAGDXAPTTNPNGSDLKSLAKQVNNAYLKNLNMTKKKARSILTGKNSAS
PVAYPYPFVIHDMDSLHQAENGLVWNQLINGTPPNKEIGVHVFYRCQCTTVETVRELTEF
AKSIPGFVDLFLNDQVTLLKYGVHEAIFAMLPSLMNKDGLLVANGKGFVTREFLRSLRRP
FSEIMEPKFEFAVKFNALELDDSDLALFVAAIILCGDRPGLMNFKQVEEIQDSILQALDQ
HLLGNHADSHYLFPKLLNKMADLRQLVTENAMLVQKIKKTESETSLHPLLQEIYKDMY
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaccagggccaccatcttggcgccggtcagaagcgacggccctcgacgggat
cggaagcggcytgtcgggggtcctgtaaggaaggggggtgtctgccagaacaggaccgcc
tccccacatggggagtgcacctcggacggagagagggagccggagtcagccttgaaggaa
ctgaaaccaaacccgctgtcgaaggggctgggcaaatgggatactgagggggagcgagga
gcggaggtgtcgcctgagggggaggacgtcctttgctcctgggaaatggattctcaggac
gaggaggcgcagcagcaggagaaagaggaggagaaacagaaggggagtagtaacagccac
agcacctccaatacggatagtcctgccccctccagcagctgcacagatctgtcccagacg
tcgtctccytcgctgtcggaccagctcttcctgggtcgagaggaagggacgggggccggg
atcaacgtggaatgtcggatctgtggagacaaagcctcggggttccactacggagtacac
gcctgtgaaggctgcaagggctttttccgccggaccatccgcatgaagctggagtacgag
cgctgtgagcgcagctgtaagatccagaagaagagcaggaacaagtgccagtactgccgc
ttccagaagtgccttctgctaggcatgtcccacgacgcgatccggtacggccgcatgccg
gaggcggagaagaggaagctggtggcgggcctcctggcgggagatakggctccgaccacc
aaccccaacggctcggacctcaaatccctggccaagcaggtcaacaacgcctacctgaag
aacctcaatatgaccaagaagaaagctcgcagcatcctcaccggcaagaatagcgccagc
ccggtagcgtatccatatcccttcgtgatccacgacatggactcgttgcaccaggctgag
aacgggctggtgtggaaccagctgatcaacgggacgccgcccaacaaggagattggggtt
cacgtgttctaccgctgccagtgcaccacggtggagacggtcagggagctcacggagttc
gccaagagcatccccggctttgtagacctcttcctcaacgaccaggtgacgctgttgaaa
tacggtgtgcacgaggccatcttcgccatgcttccctcgctcatgaacaaggatgggctg
ctggtggccaacgggaagggctttgtgacccgggagttcctgcgcagcctgcggcggccc
tttagcgagatcatggagcccaagtttgagtttgccgttaagttcaacgccctggagctg
gacgacagtgacctggccctgtttgtggccgccatcatcctctgtggagaccgtccgggg
ctgatgaacttcaagcaggtggaggagattcaggacagcatcctgcaggccctggaccag
cacctgctgggcaaccacgctgactcacattacctcttccccaagctgctcaacaagatg
gccgaccttcgccagctggtcacagagaacgccatgctggtccagaagattaagaagact
gagtcagagacctcactgcacccgctgctgcaggagatctacaaggacatgtactga
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