Salvelinus sp. IW2-2015 (Arctic char): 111963139
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Entry
111963139 CDS
T05762
Symbol
trappc12
Name
(RefSeq) trafficking protein particle complex subunit 12
KO
K20309
trafficking protein particle complex subunit 12
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111963139 (trappc12)
Membrane trafficking [BR:
salp04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
111963139 (trappc12)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_12
TPR_6
TPR_8
TPR_17
ANAPC3
TPR_16
ARM_TT21_N
ARM_TT21_2nd
Coatomer_E
TPR_11
RPN7
CCDC22_CC
TPR_10
TPR_9
Motif
Other DBs
NCBI-GeneID:
111963139
NCBI-ProteinID:
XP_023842145
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Position
LG4q.2:3156001..3174090
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AA seq
835 aa
AA seq
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MDNNETPAQRPVTLDIQGTVEVKPSLSEAPISPEPSLLPSSDVHFQEESIDLGGESFITP
EEDSHSTPSESLMDKLNDQMMESVMISDSPNNSEEDDVVPMDNLLEQFEEREEEPAAAVV
KETLVEEEKEEVGEKVDDLIGQDTTEIKIEAVMMQTSPVASSPEEPLENVKQKLTTVDQD
VITVSVSAVTPEDSTPSSGSPKPEAAALEASSKETTSKDESIPVCTIFSQGSQPKAQALV
PDGFQPTLIKSPSFSSGTGGSTEITPSQLAPLVCQPSPSLSKFFSDSGHVNPATDFFDSF
TTSSFISISNPNAESPKSAAPPERQLSASSGSSLSTSGLTESGIPTPSSFIGPTQTEATP
RPLQQAPVEPAXATAPPQPFTQLQAVFSGGDDPFATALNMSEADKRYDAWLPSEETRKVL
ISMATQQYSQVFVERERLAMPGLKFDNLQGDAVKDLMVRLMGEQAAMKRQVLTANSVEQS
FLGLKQLISTKNWRAAVDLTGRLLTAHGQGYGKAGQPSSHNTDSLQLWFVRLALLTKLSL
FQNAEMELEPFGNLDQPDLYYEYYPTVYPGRRGSMVPFSMRVLHAELPQYLGKPQESLDR
LHSMRTVCQTILDNLEQGLAEDGSMINLTQENRQASLQLWKSRLSRVMYAMANCLLMMKD
YVLAVETYHSIIQYEPQQKVQLLSGIGRIFLQIGDIKTAEKYFLDVEKASLEKGSGTTDT
CVLMNRAFIYLSQNNYSEAHSSFAEVLKIDPKNPVANNNAAVCLLYLGRLKESLRQLEGL
VQQDPALYLHESVLFNLTTMYELESSRSTQKKQALLESVACREGDSFNTQCLKLV
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaacgagactcctgcccagaggccagtcacccttgacatccaagggacagtg
gaggttaaacccagcctgagtgaagcccctatctctccagagccatccctccttccctcc
tctgatgtccatttccaggaggagagcatcgacctggggggcgagtccttcatcactccc
gaggaggacagccacagcacgccctcagagagcctgatggacaagctcaatgaccagatg
atggagagtgtcatgatctctgactcccccaacaacagtgaggaggacgacgtggttccc
atggacaacctgctggagcagtttgaggagagggaggaggagccagcagcagcagtggtt
aaagaaaccttagtggaggaagagaaggaggaggtgggggagaaagtggatgatctgatt
ggacaagacactactgagatcaagatagaggctgtgatgatgcagacaagtccagtagcc
tctagtcctgaggaaccattggagaatgtgaaacagaagctaaccactgttgaccaggac
gttatcactgtctctgtctctgctgtaaccccagaggacagcacccccagctcaggcagc
cccaagcctgaggcagcagccctggaagccagcagcaaagagaccacatccaaggatgaa
tccatccctgtgtgcaccatcttcagccagggcagccagccaaaagcccaggccctggtg
ccggatggcttccagcctaccctcattaaatctcccagcttcagtagtggcaccgggggg
agcacagagattacccccagtcaactggctcccctggtctgccagcccagccccagcctc
agcaagttcttctctgacagtggccatgtcaacccagctactgacttctttgactccttc
actacctcctccttcatctctatcagcaaccccaacgcagagtccccaaagtcagccgcc
ccacccgaacgccagctctctgcttcctctgggtcctctctgtccacctctgggcttacg
gagtccggcatccccacccctagctccttcattgggcctacccagactgaagccaccccc
aggcctcttcaacaggctccagtagagccagccrcggccacagcccctcctcagcccttc
acccagctgcaggcggtgttctcggggggagatgacccgtttgccacggcactgaacatg
agtgaggctgataagaggtacgatgcctggctgccttctgaggagaccaggaaggtgctg
atctccatggcaacgcagcagtacagccaggtgtttgtggagagggagagactggccatg
cccggactcaagtttgacaacctgcaaggtgatgctgtgaaggacctgatggtgcgttta
atgggggagcaggcagctatgaagagacaggtccttacagccaactctgtagaacagtcc
ttcctgggcctcaaacaactcattagcacgaagaactggcgtgctgcggtggacctgaca
ggcagactgctgacagctcatggtcagggctacggtaaggctggccagccctccagccac
aacactgactcactacagctgtggtttgttcgcctggccctgctcaccaagctgagcctg
ttccagaacgctgagatggaactggagccgtttggaaacctggaccaacctgacctctac
tatgaatactatcctaccgtataccctgggaggagaggctcaatggttccgttctcgatg
cgggtgctgcatgcagagctgcctcagtacctggggaaaccacaggagtctctggacaga
ctacacagcatgaggaccgtctgtcagaccatcctggataaccttgagcagggcttggct
gaggacggcagcatgatcaacctcacccaggagaacagacaagcatctcttcagctgtgg
aagtctcgtctgagtcgggtcatgtacgccatggctaactgtctgctcatgatgaaggac
tatgttctggctgtagagacatatcactccatcatccagtacgagcctcagcagaaagta
cagctgctgagtgggataggacgcatattcctgcagattggagacattaaaacagccgag
aagtatttcctagatgtggagaaagcctctctggagaagggaagtggaactacagacaca
tgtgttttgatgaacagggccttcatctacctcagtcagaacaactactcagaggcacat
tcctcgttcgcagaggtcctaaagatcgaccccaaaaaccctgtggcgaataacaatgca
gcagtgtgcctgttgtacctgggccgtctgaaggagtcgctgagacagctggagggcctg
gtgcaacaggacccggccctgtacctccacgagagcgtccttttcaacctgaccaccatg
tacgagctggagtcgtcccgctccacccagaagaaacaggccctgctggagtcagtggcc
tgccgagagggagacagcttcaacacacagtgcctcaaactggtgtag
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