Salvelinus sp. IW2-2015 (Arctic char): 111963140
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Entry
111963140 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: EARP-interacting protein homolog
KO
K23289
EARP and GARP complex-interacting protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111963140
Membrane trafficking [BR:
salp04131
]
Protein recycling
Others
Others
111963140
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EIPR1
WD40
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_WDR75_1st
Zwilch
Motif
Other DBs
NCBI-GeneID:
111963140
NCBI-ProteinID:
XP_023842146
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Position
LG4q.2:complement(3056313..3155987)
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AA seq
389 aa
AA seq
DB search
MEDDAPVIYGLEFQARALTSQTAESDAIRFLVGTQSLKFDNQIHIIDFDDENNIISKSVL
LHQAGEIWHISASPADKAVLSTCYNKTSESRVVTCGAVWRMPPEWESGSHESPDDPHNSH
NPQNLELLCHLDNSAHGNASSVLWEPMGDGKRVISLADNHALLWDLTESSTQATISSSVT
LEGKGQLKFTSGKWSPHHNCTQLATANDTAIRGWDLRTMSQIYCIENAHGQLVRDLDFNP
NKQYYLASCGDDCKVKFWDVRNINEPVKSLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVI
LSNMVSISSEPFGHLVDDDDLSDGEDNHQDEKSKEPLQDSIISTYEEHEDSVYAVEWSSA
DPWPLCLSQLRCRLVINRXPRALKYHILL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgatgcacctgtcatatacggcctcgaatttcaggctcgtgcacttacttcc
cagacagctgaatcagatgccattcgattccttgtgggcacccagtccctcaaatttgac
aatcagatccacatcattgactttgatgatgagaataacatcattagtaagagcgtcctg
ctgcaccaggcaggggagatatggcacatcagcgccagtcctgcagataaagccgtgctg
tcgacctgctacaacaaaaccagtgagagtcgcgtagtgacgtgtggggctgtatggagg
atgcccccagagtgggagtcagggagccacgagtccccagacgacccccacaactcccac
aacccccagaacctggaactcctctgtcaccttgacaacagtgcccatggcaacgcctcc
agtgtcctgtgggagcccatgggagatgggaagcgtgtgatctctctggctgataaccac
gctctgctctgggacttgacggagagctctacrcaggccacgatctccagcagtgtcacc
ctagagggtaaaggtcaactgaagttcacctctgggaagtggagtccgcaccacaactgt
acccagctggccacagccaacgacacagccatcagaggctgggacctccgcaccatgagt
cagatctactgtatagagaatgctcatgggcagctggttcgagaccttgacttcaatccc
aacaaacagtactacctggccagctgtggggacgactgcaaggtcaaattttgggacgtg
agaaacatcaacgagccagtcaagagcctggaggagcactctcactgggtgtggagcgtt
cgctacaaccactctcatgatcagctggtgctgaccggcagcagtgacagcagggtgatt
ctgtccaacatggtgtccatctcctccgagcccttcggtcacctggtggatgacgatgac
ctcagcgacggagaggacaaccaccaggacgagaagagcaaggagcccctgcaggacagt
atcatctctacctatgaggagcatgaggacagtgtgtacgcagtagagtggtcctcagca
gacccatggcctctttgcctctctcagctacgatgcagactggtcatcaacaggngtccc
cgcgcactcaaataccatatcctgctctag
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