Salvelinus sp. IW2-2015 (Arctic char): 111963251
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Entry
111963251 CDS
T05762
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1 isoform X1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111963251 (exd1)
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
111963251 (exd1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
111963251
NCBI-ProteinID:
XP_023842332
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Position
LG4q.2:complement(9425838..9433855)
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AA seq
565 aa
AA seq
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MTMDDFQFMDSFKRKRIKLTLKTATFLGIVQRINTNKTVILEDVVDVKNGRKFPGVKLFF
GHEILNVEFPNVTKTDRDNTSDHRPEGHLTVAEFQPYRKGLILNDDDESHVNFVVIDEFH
EKFGPAMMHIRKQQVIGIGADGVGTFQHERLCWLQIATKNKVYLFDILLLGARAFKNGLS
MILENNHILKVTHDCRSLAGCLMAQFGVNLTNVFDTQVADILCFYTATGGFLPDRVSTLP
KVVSLHLKMSSSQLSSLNIKSLLTKEDKEVWYVRPCPLSLLKVMALSVIHLQPLRLVLLD
ALMADYTGLVDSYLSGSREEPVHMQNIGSSSVLELPRELRELEHTRQKRQKWAVDRYPVT
EQGLLERSNPRPLPPSQNGQGQDTATQKQPDPPVPTEVVPVVPAPGQGPAEKPRPSSTLG
ASDPDAMTSALTQEAQQSYRKQPSGVVSPVAPSGATGLLEIVMDTMAGRGRSLLKDPTPP
ILPVFPSLGRGLALPIPAAQVPKESPGALKTQAPVGRLEVPVPPGPIPSPVQPSENIPGA
GRGLIQKPQGLTSPLSLSFSSFRKR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggacgactttcaattcatggatagcttcaagagaaaacgcatcaaattgacc
ctcaagactgcgactttccttggaattgttcagcggataaacaccaataaaactgtgatt
ttggaggacgttgtggatgtcaagaatggaaggaaattccctggagtgaaactattcttt
ggacatgaaattctgaatgtggaattcccaaatgtaacaaagactgaccgagataacacc
agtgaccacagacctgaaggtcacctgacagtggcagagttccagccttacaggaagggt
ctcatactgaatgacgatgatgagagccatgtcaactttgtggtcattgatgagttccat
gagaagtttggtcctgctatgatgcacatccggaagcagcaggtgatcgggataggagct
gacggagtcgggacgttccagcacgagagactctgttggctgcagattgccactaagaac
aaggtgtacctctttgacatcctgttgcttggagcccgggcctttaagaacggcctgtcc
atgatcctagaaaataaccacatattaaaggtcactcatgactgccggagcctcgccgga
tgtctgatggctcagtttggagtaaatctcaccaacgtctttgacacgcaggtggcagat
atcctgtgcttctacacagcgaccggtggcttcctgccagacagggtcagtaccctaccg
aaggtggtgagcctacatttgaagatgtcctcgtcacaactctcctctctcaacatcaag
tctctgctcaccaaggaggacaaagaggtgtggtatgtgcgtccctgccctttgtccctg
ctgaaggtcatggccctgtcggtgatccacctgcagcctctgagactggtgctgctggat
gccctcatggctgactacacaggcctggtggactcctacctcagcggcagccgagaggaa
cctgtccacatgcagaacatcggctcgagcagtgttctggagctgcccagggagctgcgg
gagttggagcacacgcgtcagaagcgccagaagtgggccgtcgaccgctaccctgtcact
gagcagggcctgctggagcgctccaaccccagacccctacccccatcacagaatgggcag
ggccaggacacagccacccaaaaacaaccggaccctcctgtccccacagaagtggtgcct
gtagtcccagcaccaggacagggcccagcagagaaaccccgtcccagcagtaccctgggg
gcctccgaccccgacgctatgaccagtgccctgacacaagaggcccagcagagctacagg
aaacagccgtctggagtcgtcagcccagtggctccatcaggagcaacaggactcttggag
atagtgatggacacaatggcaggcagagggaggtccctgttgaaagacccaacgccaccc
attctccctgtgttcccctccctgggaagaggcctggctctcccgataccagcagcccag
gtccccaaggagagccccggagccctgaagacccaggccccagtggggaggttggaggtg
cctgtccccccaggcccaatacccagcccagtacagccatctgaaaacatccctggtgct
gggagaggcctcatacagaaaccccaaggtctgacctctcctctcagtctctccttcagt
tcatttagaaagagatga
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