Salvelinus sp. IW2-2015 (Arctic char): 111963281
Help
Entry
111963281 CDS
T05762
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111963281 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salp03400
]
111963281 (mlh3)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
111963281 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
111963281
NCBI-ProteinID:
XP_023842382
LinkDB
All DBs
Position
LG4q.2:complement(10578563..10584566)
Genome browser
AA seq
1242 aa
AA seq
DB search
MIKCLSKEVQGKLRSGIAIFSLQQCLEELILNSIDASATCVGVRVDIEAFKVQVIDNGSG
MDIEDMESVGNRYFTSKCSSLEDLDHLKFYGFRGEAVASIANLAMLVEISSRTKMSVKTH
VKVFKDGKGLDVFEAETTRPSAGTTVVICNFFHNMPVRRNRMDSVLEFERIRQRVEAISL
IHPSVSFTLKNDCTGTMVVQLSKARNTYYRFVQIHGLGRAQKLGEINHSHAQFEVSGYVG
REGHYNNTLQFLYVNDRLLLKTRIHKLLNLLLRKVGSLSRQNDSPGSPPAIRSPKQRRGA
ELHAMYVINIMCHYSEYDICLEPAKTLIEFKDWESILFCIEEAVKAFLTRENLVSEISPE
DIQDYICKNVFSGQTASTDGVKDSIGKGVQTHMEGVTLKCNVGRTLASEPVHRRQTEDSD
KMKSVCQTCDGVESEQGDRVGKPRDKEVLTGFEQEQEHNTTNPQCRPSSVDTDQGLQYDS
ITDSSVTDSSESYKEVTKENESNAHLKSAISCPESSQHSLIFKTKGENLKMSIEEGTEMK
DNKREHVSLSRCTVRAPCSLTQGIQSEMGSIKQTLPQPQDTELNPGGHRKIFLSHPYIHS
SLPSQKCLSHQSRPGLALESREKLATKRKWPMVEGPGHLHVYDREGKDLPTGIPSKISTF
MSCQKLALYKEAGSLDRFRRIYGKLTESNPVPVDVNSNYLAIDATASQTEHLVMNAKAVL
PYLEADQERDVTESRLDLMKDHKSPLTLSMFTKLKSLSARSSEISLAAKLSQLKHQRTEV
ATSAFVHPPETTSNEDICPQDTVENNAILEINNGEHNNTGQNRDFIPGCSTNPLPDEKEA
NNVTASCDWLHHYDDAVGKLVYINKVTGLSKYEAPSAEETQVSCTSDVTNMAISVISKKG
IEYRCYPFQMDLVLPFLPKSKAGRVLSSGPDNRDDIQDSNSLSSLYSEWTNPVFARPPMV
GVDISSVQAEGLAVKIHNILFPYRFSKDMIHSMKVIHQVDKKFLACLINTQDQEPAACSE
TDGNLLVLVDQHAAHERVRLENLVADSYEDDPEAPGERRLCSSTVAPPLEVSVTEEELRL
LRSCRPSLRGLGLEMQFSQIGDPQVLVGKVPMCFTEKERNELRRGRRSIIKPIVEEYLQE
QIELLRSTGRVRGTLPLTVLKVLASLACHGAIKFNDRLSKEECCSLVGALSSCQLPFQCA
HGRPSIAPLVDVLHLNDQEEPPRPNLRKLRRMYKAWELYGNR
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgtttgtcaaaagaagttcaaggtaagcttcggtctggaatagcaatattt
tcattacagcagtgtcttgaagagcttattctgaacagtattgatgctagtgcaacatgc
gtgggtgtgagggtggacatcgaagccttcaaagtgcaggttatagacaatggctcaggg
atggacatagaggatatggagtctgtaggaaacagatacttcacaagcaaatgcagttct
ttagaggacctagatcatctcaaattctatggattcagaggagaagctgttgccagtatt
gctaatctcgccatgctggtggagatatcatccaggaccaaaatgtctgtgaagactcat
gtgaaagtcttcaaggatggtaaaggcttggacgtgtttgaggctgagactacccgccca
tctgcagggacaactgttgttatttgtaacttcttccacaacatgccagtgaggagaaac
aggatggatagcgtgctggagtttgaacggatcaggcagagagtggaggccatttcactc
attcacccctctgtctctttcacgctgaagaatgactgcacagggaccatggtggtgcag
ctctccaaagcccgaaacacttactacaggtttgttcagatccatggtttaggtagggcc
caaaagcttggggaaatcaaccactcccatgcacagtttgaagtaagtggttatgtagga
cgagaaggccactacaacaacaccttacagttcctctatgtgaatgacaggttacttctc
aaaacccgcatccacaagctgctgaaccttctcctacgcaaagtaggcagtttaagtcgg
cagaatgacagccctggttcaccacctgccattaggagcccaaagcagagaagaggagcc
gagctacatgcaatgtatgtcatcaatatcatgtgccactactctgagtatgacatatgc
cttgagcccgccaagaccctgattgaattcaaagactgggaaagtattctgttctgcata
gaagaggcggtgaaagcattcctgacaagagagaacttggtgagtgaaatctccccagag
gatatccaggactacatttgtaagaatgtgtttagtggccaaacagctagcacagatgga
gttaaggactccattggcaaaggtgtccaaacacacatggagggtgttaccctgaaatgt
aatgttggaaggacccttgcatctgaacctgttcatcgacggcagacagaagactctgac
aagatgaaaagtgtttgtcagacatgtgatggagttgaatcagagcagggtgacagagta
ggaaaaccaagggacaaggaggtccttacgggttttgaacaggaacaagagcataatacc
acaaacccacaatgtcgaccaagctcagtagatacagaccaaggtctacagtatgattca
attacagattcatcagttacggattcatcagagtcttacaaggaagttacgaaagagaat
gaaagcaatgcacatctgaaatctgctatttcttgtcctgaatcatctcagcatagtctt
atctttaagacaaagggagaaaatctgaaaatgagtatagaagaaggaacagagatgaag
gataataaaagagagcatgtatccctctcaagatgcactgtgagagcaccatgttctctc
actcagggaatccagtcagaaatgggctctatcaaacagacactacctcaaccacaggac
acagaactgaatccaggtggacacagaaagatctttctatcacatccatacattcatagc
agtttaccctctcagaaatgtctctcccaccagagtagaccagggctagcgttagaatct
agagagaaacttgcaacaaaacgaaaatggcctatggtggagggcccaggccatcttcac
gtttacgacagagaaggtaaggaccttcccactggcatcccttcaaagatttctacgttc
atgtcatgtcaaaagctggctttatataaagaggctggatctctggacaggttcagaaga
atatacgggaagcttaccgaatccaatccagttcctgtcgacgttaatagcaattattta
gcaattgatgccacagcttcccagaccgaacacttggttatgaatgccaaggctgttttg
ccctatcttgaagcggatcaagaaagggatgtcacagagtcacgtctggatctgatgaaa
gaccacaaaagcccattaacactctccatgttcaccaaactcaaatctctctctgctcgg
agcagtgaaatatctttggctgccaaactctctcaattaaaacaccaaaggacagaggtt
gcaaccagtgcatttgtacatcctccagagactacttcaaatgaggatatatgtccccag
gacactgtagaaaacaatgctattctagaaatcaataatggagaacacaataacactggc
cagaatcgtgacttcatcccgggctgcagtacaaatcctctgccagatgaaaaggaagcg
aacaatgtcacagcatcatgtgattggctgcatcactatgacgacgctgtggggaagctg
gtctacatcaacaaagtgacaggactcagtaaatatgaagcaccctctgctgaagagaca
caagtgtcttgcacgtcagatgtcaccaacatggcaatcagtgtcatctccaaaaaaggg
attgagtacaggtgttacccatttcaaatggatctagtcttgcccttccttcccaaatcc
aaagcagggagagttcttagttcagggcctgacaatagagatgacattcaggactctaat
tcactgtcctccctgtactctgagtggactaaccctgtgtttgcacgacctcctatggtt
ggtgtggacatatcaagtgtgcaagctgaaggactggctgtgaagatccataacatcctc
tttccataccgcttctccaaggacatgattcactcaatgaaggttattcatcaagtggat
aagaagtttcttgcatgtcttatcaacacacaagaccaagagcctgcggcctgcagtgaa
actgatgggaaccttttagtgttagtggatcaacacgctgcgcatgagagagttcgtctt
gagaatctagttgcagattcgtacgaggatgatccagaggcaccgggggagagacggcta
tgctcatccactgtagccccaccactggaggtcagcgtgacagaggaagagctgaggctg
ctcaggtcctgccggccatccttgaggggcctgggtctggagatgcagttctcgcagata
ggagatccccaggtcctggtggggaaggtgccaatgtgtttcacagagaaggagagaaat
gaactccgccgggggaggcgttctatcatcaagcccatagtggaggagtaccttcaagag
cagattgagttactgcgttcaactggcagagtgcgagggacattgcctcttacggtactt
aaagtcctcgcctcccttgcatgtcatggtgcaatcaaattcaatgaccgcctcagtaag
gaggagtgttgcagcctggtaggcgctctatcttcatgccagctgcccttccagtgtgcc
catggccgcccatccatcgccccgctggtagacgtccttcacttgaatgaccaagaggaa
ccacctagaccaaacctcagaaaactgagaagaatgtacaaagcctgggaactttatgga
aatagataa
DBGET
integrated database retrieval system
