Salvelinus sp. IW2-2015 (Arctic char): 111963349
Help
Entry
111963349 CDS
T05762
Name
(RefSeq) protein jagged-2 isoform X1
KO
K21635
jagged-2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111963349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
EGF_TEN
hEGF
EGF_2
DSL
JAG1
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
Motif
Other DBs
NCBI-GeneID:
111963349
NCBI-ProteinID:
XP_023842486
LinkDB
All DBs
Position
LG4q.2:complement(13403344..13441151)
Genome browser
AA seq
1242 aa
AA seq
DB search
MWNCMGISKCLSIVCLLLMVWTEVSQSSGYFELQLIAVQNANGQLSDGDCCDGERNAQDL
NCSRDECDTYFRVCLKEYQTEVTTTGLCIYGTGSTNVIGGNTFQFKSTKNNQNRNNDGGK
IVIPFQFAWPRAYTLIVEAWDWDNGTHSSSGEDLLIERSVCKGMINPGDDKQTIQHNGPT
ANFEYNIRVRCDENYYGNKCNKQCRPRNDDYGHYVCDQFGNRGCLEGWMGPYCTAAICKQ
GCNLLQGFCNAPGECTCKYGWQGPFCDDCLPYPGCVHGTCIKPWLCSCEKNWGGLLCDKD
LNYCGTNKPCKNGGTCMNSEPDEYNCACSDSYSGKNCEIVEHACVSNPCANGGTCHEVPS
GFECHCPAGWSGPTCAKDMDECASNPCAQGGTCIDMENGFECLCPPQWAGKTCQIDANEC
MGNPCLNAYSCKNLIGGYHCACFRGWAGQNCDINVNSCHGLCQNGATCKEWRRGYVCACS
PGFVGRHCEVQRNSCASGPCRNGGRCHTLLDGFMCECPHGYTGTTCEVQSNPCSPNPCQN
KAQCHSLMEDFYCACPDDYEGKTCSELKDHCKTNPCEVIDSCTVAVATNNTQEGVWYISS
NVCGPYGRCISQPAGNFTCSCELGFTGTYCHENVNDCVSSPCKNGGTCIDGISSFQCFCP
DGWEGTLCVIDVNECSRSPCKNGGRCVDLVNDFYCQCQDNWKGKTCHSRESQCDSSTCSN
GGTCFDHGDTFHCTCLSGWGGSTCNTGKNSTCDSNPCENRGTCVGGGDAYTCICKDGWEG
PTCAQNTNDCNPTPCYNSGVCVDGVNWFRCECAAGFAGPDCRINIDECQTSPCAYGSTCV
DEINSFRCVCPLGWAGPRCQEFIGIGKACRYSGLQFPHGSRWEEECNTCQCVNGSVRCSK
VLCGRRPCLLHRVASGPDSIAPCPRGQECVEHKFLTCFAPPCHQWGVCSTPDPPPPLHTQ
CEPNCGYLDNSCARITLIFNRDKVPQGTIVENICLELRYLPITQTLAKERTLLILCDLSY
SNSDAVEVVMSYDQDGQERDGDRDQIQEASSAIIGALSKRHNSTVMLAVVEVKVETQVMP
QSVDHLVPVLCVVFSVLWIFCIVVCVWWTRKRKKERERESTVEDSTVNNLLEPLRVILPQ
HKDNLDKDIQYECKKLMSPPDRTCDGAEGEEEEDELRGGMELDKCSTQKCSLAGVQDRVG
VICTMRSAPVKTPHWTVYSPKDNRCKNLSAANFSEDVKDHYV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgtggaattgtatggggatttcgaagtgtctctcaatagtgtgtcttctcctgatggtg
tggactgaggtgtcccaatcttcgggctattttgagctgcagttgattgctgtacagaac
gctaacggtcagttgtcggacggggactgctgcgacggagaaaggaacgcgcaggatctc
aactgtagcagggatgagtgtgatacgtacttcagagtgtgtctaaaggaataccaaacg
gaggtcacgaccacaggcttgtgcatctatggaactggatctactaacgttatcggtggg
aatacttttcaatttaagagcaccaaaaacaaccaaaaccgaaacaacgatggtggaaag
attgtcatcccattccagttcgcttggccgcgggcgtacactctgattgtggaagcgtgg
gactgggacaatggtacacacagcagcagtggtgaggatctgttaattgagcggagtgtc
tgtaaaggaatgatcaaccctggagatgacaagcagactatccaacacaacggtcctaca
gccaactttgagtataacatccgcgtgcgctgtgatgagaactactatggcaacaagtgc
aacaagcagtgccggccacgcaatgatgactatggccactacgtgtgtgaccagtttggg
aacagaggctgtttggagggctggatgggaccttactgtacagctgctatctgcaagcag
ggctgtaacctgctgcaaggattctgcaatgccccaggagaatgcacatgtaaatacggt
tggcagggtccgttctgtgacgactgcctgccctacccaggctgtgtccatgggacctgc
atcaagccctggctgtgcagctgtgagaagaactggggaggcttgctgtgtgacaaagat
ttgaactactgtgggacgaacaagccttgtaagaacggaggaacgtgtatgaactcagag
ccagatgaatacaactgtgcctgttctgacagctactcaggcaagaactgtgagatagtg
gaacatgcatgtgtgtccaacccctgtgccaacgggggcacctgccacgaggtaccgtct
gggtttgagtgccactgtcctgcaggctggtcagggcccacctgcgctaaagacatggac
gagtgtgcgtctaacccctgtgctcagggtgggacctgcatcgacatggaaaacggattt
gagtgcctctgccccccacagtgggctgggaagacctgccagatagacgcgaatgagtgt
atggggaacccatgcctcaatgcttactcttgcaaaaacttgatcggtggatatcactgt
gcctgctttcgaggatgggccggccagaactgtgacatcaatgtcaacagctgccatgga
ctgtgtcagaatggagcgacttgcaaggagtggcgaagaggctacgtgtgtgcctgctca
ccggggtttgtgggccggcactgtgaggtccagaggaacagctgtgccagcggcccatgt
agaaacgggggcaggtgccacaccctgctggacggcttcatgtgtgagtgcccacatggg
tacactggcactacctgtgaggtgcagagtaacccgtgcagccctaacccgtgccagaac
aaggcccagtgccacagtctgatggaagacttctactgtgcctgtcctgatgactatgag
ggcaagacctgctccgagctcaaggaccactgcaagaccaatccctgtgaagtgattgac
agttgtactgtcgctgtggccaccaacaacacacaggaaggggtgtggtacatctcgtcc
aatgtgtgcggcccctacggacgctgcatcagccaacctgctgggaacttcacctgctcc
tgtgaactgggcttcactggaacatactgtcacgagaatgtaaacgactgtgtgtcgtct
ccctgtaagaacggaggaacttgcatcgacgggatcagctctttccagtgcttttgccct
gacggctgggagggcacgctgtgtgtcatagatgtgaatgagtgcagtaggagcccctgt
aagaacggaggtcgctgtgtggacctggtcaatgacttctactgtcaatgccaggacaac
tggaaaggcaagacctgccactcacgtgagagccagtgtgactccagtacctgcagtaat
ggggggacgtgctttgaccacggggacaccttccactgtacctgtctgtcagggtggggc
ggcagcacctgtaacacaggcaagaacagcacgtgtgactctaacccatgtgagaacaga
ggaacctgtgtcggaggaggtgatgcctacacctgcatctgcaaggatggctgggagggg
cccacatgtgctcagaatactaatgactgcaaccctaccccctgctataacagtggtgtc
tgtgtggatggtgtgaactggttccgctgtgagtgtgccgcgggattcgccggaccagac
tgccggatcaacatagatgagtgccagacgtctccctgtgcctatggttctacctgtgtg
gatgagatcaacagcttccgatgtgtgtgtcccctgggctgggctgggcctcgctgccaa
gagttcatagggatcgggaaggcctgtcgttactccggcctgcagttccctcatggcagt
cgatgggaggaggagtgtaatacctgccagtgtgtcaacggcagtgtgcgctgttctaag
gtgctgtgtggccgacggccctgtctgctccatagagttgcttctggtccagacagcatt
gccccctgtcctagaggacaggagtgtgtagagcacaaattcctcacctgcttcgccccg
ccatgccaccagtggggcgtgtgttctacccctgaccccccaccgcccctccacactcag
tgtgaacccaactgtggttatttggacaacagctgtgcccgcatcacactcatcttcaat
agagacaaagttccacagggtaccattgtggagaacatctgtttggagctgaggtacctt
cccatcacccagaccctggctaaggaacgtacgctcctcattctctgtgacctgtcctac
tccaacagtgatgccgtggaggttgtcatgtcttatgatcaggatggtcaggagcgggat
ggagaccgtgatcagattcaggaggcttccagtgccatcatcggtgccctgtccaaacga
cacaacagcaccgtcatgctggccgtggtggaggtcaaagtggagacgcaggtcatgccc
cagtctgtggaccacctggtgccagtgctgtgcgtggtgttcagtgtgctgtggatcttc
tgcattgtggtgtgtgtgtggtggacccgtaagaggaaaaaagagcgtgagagagagtct
acagtggaggacagcactgtcaataaccttctggagccgctgagggtcatcttgccacag
cacaaagacaacctagacaaagacattcagtacgaatgcaagaaactcatgagccctcca
gaccggacgtgtgacggggctgagggagaggaggaagaggacgagctgaggggagggatg
gagctagacaagtgctccacacaaaagtgctcattggcaggagtgcaggacagagtgggg
gtgatctgtacgatgcgtagcgcccctgttaaaaccccccactggacagtgtacagtccc
aaagacaaccggtgtaaaaacctcagcgctgccaacttcagtgaggatgtcaaagatcat
tatgtatga
DBGET
integrated database retrieval system
