Salvelinus sp. IW2-2015 (Arctic char): 111963375
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Entry
111963375 CDS
T05762
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111963375
Membrane trafficking [BR:
salp04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
111963375
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
LRR_5
Ig_2
ig
LRR_EndoS
LRR_9
V-set
LRR_Zer-1
LRRNT
LRRCT
Big_2
Receptor_2B4
Big_6
Motif
Other DBs
NCBI-GeneID:
111963375
NCBI-ProteinID:
XP_023842540
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All DBs
Position
LG4q.2:complement(14300350..14332631)
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AA seq
611 aa
AA seq
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MRRFTLYHCHPLLDGALLLLLASCAMGCPARCDCSAQTKSVSCHRKRLPTIPEGIPIETR
LLDLSKNKLRSITPDNFSSFLQLEDLDLSDNLIGVVEPGSFKFQLSLRSLNFHSNLLQLV
PAGVLSGLANLTSLDLSHNRLVVLLDHGFQDLRRLVSLEVGDNELVFISQRAFTGLLGLQ
SLTLERCNLTVVPTDALGHLHSLVELRLRHLGIGTLKPYSFKRLPRLRHLEIDYWPWLEV
LPALSLHSLNLTTLSVTNTNLSSFPGHALRNLPYLTHLNLSFCHIQHIQQGVLDQLPRLQ
ELHLRGAQLVYIEPLAFLGLPALHMLDVSHNQLDSVERAVFKSPDSLQTLLMGGNPLVCD
CRLLWLLSGRKPPFLQLPDPQPECSAPERLRGKPLLDLKEPLVTRYVICTKPRIGPNTTQ
LLLADEGKPVRLNCIADGAPRPSMAWVTPHRQYVTVKSTGRVTVHTDGTLEIKAAELHDS
GVYLCVASNAAGNASLSASLAVKSLGISDTSLYANKIGLLADSNGTWANGTVLYNMTNPI
DLKTIIISTAMGCLSFLGVVIFCFLLLFAWSRGKGRHKSNFDMEYVPRKSNGTAAEATET
SGPRRVNMKMI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcttcaccctgtaccactgccaccctcttctggatggggctctgctgctactg
ctggctagctgcgccatgggctgccccgcccgctgcgattgctccgcccagaccaagtca
gtcagctgccatcgcaagcgcctgcccaccatccctgagggcatccccatcgagacccgg
cttctggacctgagcaagaacaagctgcggagcatcaccccagacaacttctcctccttc
ctacaactggaggatctggacctcagcgataacctgattggcgtggtcgaaccgggctcc
ttcaaatttcagctctccctgcgctcgctgaacttccacagcaacctcctccagctggtc
cctgccggcgtgctctccggcctggccaacctcacaagtctggacctcagccacaacagg
ctggtggtgctgctggaccatggcttccaggaccttcggaggctggtgtccctggaggta
ggcgacaatgagctggtgttcatctcccagagggccttcacgggcctgctgggcctacag
agcctcaccctggagcgctgcaacctgactgtggtgcccaccgatgccctggggcacctg
cacagcctggtggagctccgcctgcgccacttgggcatcggcaccctgaagccctattcc
ttcaagagacttccccgtcttcgccacctggagatcgactactggccctggttggaagtc
ttacccgctctgtcactacatagcctcaacctcaccacgctctctgtcaccaataccaac
ttgtcgtccttccccggccatgctctacgcaacctgccctacctcacgcacctcaacctg
tccttctgccacatccagcacatccagcaaggggtgctagaccagcttccgcgactgcag
gagttgcacctgcgaggagctcaactggtttacattgaacccctggccttcctgggcctc
ccagcactacatatgttggacgtgtcccacaaccagctggactcagtggagcgagctgtg
ttcaagtcccctgacagcctgcagacgctgctcatgggggggaacccactggtgtgcgac
tgccggctcctatggctgctgagtggccggaagccaccctttctgcagctccctgacccc
cagcccgagtgcagtgcccctgagcgcctccgtgggaaacccctgctggacctcaaggag
ccgctggtgacacggtacgtgatctgcaccaagccccggattgggcccaacaccacccag
ctgctgctggcagatgaggggaagcctgttcggctcaactgcattgcagacggggctcct
cggccctccatggcctgggtgacgccacacagacagtatgtcacagtgaaaagcaccggt
agagtgacggtccataccgacggcaccctggagatcaaggctgcagagctgcacgatagc
ggcgtgtacctgtgtgtggccagcaatgcggcgggcaacgccagcctgtcggcctcgctg
gcggttaagagcctgggtatcagcgacacatcgctctacgccaacaagattggactcctg
gcggactccaacgggacctgggccaacgggaccgtcctgtacaatatgacaaaccccata
gacctgaagaccatcatcatctccacagcaatgggctgcctgtccttcctgggcgtggtc
atattctgtttcctcctcctgtttgcatggagtcgtgggaagggaaggcacaagagcaac
tttgacatggagtacgttccccgcaaatcgaacgggacagcagcggaggcaactgagaca
agcgggcccagacgagtcaacatgaaaatgatttaa
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