Salvelinus sp. IW2-2015 (Arctic char): 111963396
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Entry
111963396 CDS
T05762
Name
(RefSeq) growth/differentiation factor 6-A-like
KO
K20013
growth differentiation factor 7
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04060
Cytokine-cytokine receptor interaction
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111963396
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111963396
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111963396
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Transforming growth factors (RSTK binding)
111963396
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Vir1p
Motif
Other DBs
NCBI-GeneID:
111963396
NCBI-ProteinID:
XP_023842581
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Position
LG4q.2:15057910..15066627
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AA seq
443 aa
AA seq
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MDPIRAAAPLLWFSLCFGNIMEAAVLGSLQYPSSADDNGLVSHLDEQSRRKPTAVSRKDP
PINDTIVPHDYMVSLYRTLSEIERRGLNSSVPRSARHANTVTSFVDQGKDPSSWGSGQRY
LFDLSSLSRTDEIVEAELRILRKPPLDRLPMLTWGRNLYRLLLYTCSSKGNSGRRLLDSR
TVDVLDREPPKWDIFDVWASVKARWRSHRTAAGNDLLVACFDLLVVSELTKEAANPLTVG
LGRRSRQPQERALLVAFSRTRRKENLFKEIREQMKAVRRDLGFLDPSDLSGDVIGHLPRR
RQRRTALTGRSIGGAGGGGGGGGVGGGGGRGGGGGGRRKTRCSRRPLHVNFKELGWDDWI
IAPLDYEAHHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPESSPPSCCVPSKLSPISILY
IDSGNNVVYKQYEDMVVESCGCR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggatcctattagggctgctgctcctttgctatggttttccctgtgctttgggaatatt
atggaggcagcggtacttggatcattgcagtacccctctagcgcagatgataacgggctt
gtttcacatctggatgagcagagtcggagaaagccgaccgcggtgtccaggaaagaccct
ccgataaatgatactatcgtcccccatgactatatggtatcactatacaggacactctct
gaaatagagagaagaggtcttaacagcagtgttcctcgctccgcaagacacgccaacacg
gtgaccagtttcgtggatcaaggaaaagatccctcctcctggggaagtggccagcgctat
ctcttcgacctctccagcctgtccaggacagatgagatcgtggaggcagaactgaggatc
ctgagaaagccaccgctggatcgcctccctatgctgacatggggcaggaacctttatcgc
ctcctcctctacacatgttcctctaaggggaactctgggagacggctgctggactccagg
acagtcgacgttctggaccgcgagcctccgaaatgggatatctttgacgtgtgggccagc
gtgaaagctcggtggaggagccacaggacagcagcgggcaatgacctcctcgtggcctgc
tttgacctgctggttgtttcggagttgaccaaagaggcagccaaccctcttacagtaggg
ctgggacgccggtctcggcagccccaggagagggccttgctggtggctttttctcgcacc
cgcaggaaagagaacctgttcaaggagatcagggagcagatgaaggcagtgcgaagagac
ttgggttttctggacccttcggacctctctggtgacgtgattggtcacctacccaggcga
cgccaacgccggactgccctcaccggccgatctataggcggagctggtgggggaggaggg
ggaggtggtgttggaggaggaggaggaaggggcggtggaggcggggggcgcaggaagact
cgctgcagccgtaggccgctccatgtcaacttcaaggagttgggctgggacgactggatc
atcgcaccgctggattatgaggcgcaccactgtgagggcgtgtgcgactttccgctgcgc
tcacacctggagcctacgaatcatgccatcattcagacacttatgaattctatggaccct
gaatccagcccgcccagctgctgtgtcccctccaaactcagccccatcagcatcctctac
attgactctggcaacaatgtggtctacaagcagtatgaggacatggtggtggagagctgt
ggctgcaggtag
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