Salvelinus sp. IW2-2015 (Arctic char): 111963510
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Entry
111963510 CDS
T05762
Name
(RefSeq) tubby-related protein 4-like
KO
K24720
tubby-related protein 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111963510
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
Other domain-containing proteins
Tubby family proteins
111963510
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
111963510
NCBI-ProteinID:
XP_023842769
LinkDB
All DBs
Position
LG4q.2:complement(26358127..26372475)
Genome browser
AA seq
1920 aa
AA seq
DB search
MSRNYEPGHSVGMLATVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCQRRYHEEGWLAT
GNSRGVVGVTFTSSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFV
WIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLES
QITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVGMSWNCPCFLVEDST
ESDTDSDDNNPPQVRILKPLLTVSFISGDISLMNNYDDLAPTVIRSGLKDVEVQWCSQGD
LLAVAGMERHGLPGVPSDSIVRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSRLF
LACGTALYVVRVEHRVASLQLLCQQGIASALREERDVGKLNMPSLLCSYVTTAFIPTIKP
PIPDPNNIRDFVSYPTAGNERLHCTMKRAEDNPEAGGPCYTLYLEHLGGLVPILKGRRIS
KLRPEFIIIDPKTDSKADEVCVNAMISYMTDSCNCSDSSDIELSDEWVGKKSPKLSRGNR
SPKLSRRNMESRKSPKMSRASQEGPRSPRLPTKKPPIRSPSLTRREMSMDGISEHNYLAQ
VTSNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISLDFMSLPVF
NPNVFSEDEDDLPVMGPSGVTSDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQN
IQLDVLTNPTATASAAAAAAAAAASASIAGPDHSQNAVAAQCSGTLGRYSNPGQVIFNGL
EMGPLLAGTLPPPPPPHHLPQQPQQQRPQSQQTHQQQSKQPQQILTQQQQQQQQQRMQQH
QQLQHQQQQIQQQHQQLQQHHIQQIQQQQQQQTQQHQALQQQHQQQQAALQQQQQQIQQQ
HQHLQQQQIAQQHQQMQLQHEQMHQQQQQMQQQQQQIRQQIIEMRQQQQQLQQQHQQIQQ
QHQQMQRQHQQMQQQLKLQITLPPPPTGYPTISLQQFQVLQQIPHPSAELGPERGEQGHT
QSHTLGRPSLPRSRPPSFIDVDSLRSRPPSFIEADTSRSRPPSFIDIDTIRTRPPSFIDA
DTGTLRSRPPLFLDADSSRSRPPSFIDTDTLRSRPPSFLDAETSLEIQMRKVNPPPPYPG
TVVSAATATTSSAPQTLITNCDNPNILVTADLCLKKDEFSLHPVGLQYQMGYERITTFDS
SGNVEEVCRPRRRLIRNQNAYAVQGMGGSATLKVTSSSDSKKVQLPYSSATLSRLSVPRY
SIPSRDPPPYPDPANQVNINTTTLPPSQRMDSSHMIHATLRPDRRDVESRLKVSQMVDAS
RTLPTKSKVNSAALALSYQQRVPTALYTCTQCSSNSSSSSSTSVSVSGGASSSSGIAGGT
VVRQDFPPGKGAHHSTIIVHSKSTSPQASQSSYNLLSPVDNSRDRTVYVNSAFTEDETLS
QQCRHLTLGEVSLTLKRPPPYQWDPNTAEEFWIPPEQTILAPPPPPTHKPPPPIIFSNAQ
HLDMTRLPFVLSTKPPSSPSTVTFPSGYQISMSPFPPGVGQDGSPLQSMQSIPPPCPPNE
VVAPVPQFSQQDPNLVLPPGYPPNHANLACCPLPPMYPGATSCAGLQLHPVSLHPWNPYS
LPMQDLSGSATLPSKSHQVLEKPVLSPPPSIVPPPPPLTLPPPPPTELPKSKSPTKELAE
SASSFQEPSSLNESPVPDRQGSDMFSKKSRKRLDSRAEAANMTTVSESKSKKEGRALSDF
NSLISSPRLGGREKKKLKGQREQLNKTKKLNRTSTTSEFQDSSESEPELFISGDELMNQS
QSSKKGWKSKRSLRMASELEEIKCRKANEREDRGLGSQGFIYVMANKQPLWNEATQVYQL
DFGGRVTQESAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaactatgagcctggtcactcagtagggatgttggctactgtggaacatggt
cccatactctgcagcgactccaacatcctctgcctctcctggaagggccgggtccccaag
agcgagaaggacaagcctgtgtgccagcggcgctaccatgaggagggctggttggccact
gggaacagtagaggggtggtgggcgtgacgttcacatccagccactgcaggagagacagg
aacactcctcagagaatcaacttcaacctgcgaggacacaacagtgaggttgtgttggtt
cgttggaatgagccctttcagaagttggccacgtgtgacatggagggaggcatcttcgtc
tggattcagtatgagggacggtggtctgtagagttagtgaatgaccgtggtgcccaggtg
agtgatttcacgtggtcccatgatggcactcaggccttgatcgcctacagggatgggttt
gtcctggtggggtcagtcagcggacagagacactggtcctcagagatcaacctggagagc
cagatcacctgtggcatctggacacctgacgaccaacaggtgttgtttggtacagccgac
ggtcaggtgatagtgatggactgtcatggtcgcatgctggcccatgtcctgctacacgag
tcagatggcatcgtcggcatgtcatggaactgcccctgcttcctagtggaggacagcaca
gaaagcgacactgactctgatgacaataacccacctcaggtgcgtatcctgaagcccctt
ctgacagttagcttcatatcaggagacatcagtttgatgaacaactacgatgacctcgct
cctaccgtcatccgctcaggactcaaagatgtggaggtccagtggtgttctcaaggggac
ctcctggccgtagctgggatggagagacatgggctccctggagtcccctctgactctatc
gtgaggaacgccctggtcaaattctacaatgtccaaggagaacatatctacacgttagaa
acacctgcccagcgccccatcaccactatctgctggggccacagagactctcgtctgttc
ctggcgtgtggcacggcgctgtacgtggtgcgggtggagcaccgggtggccagcctgcag
ctgctgtgccaacagggcatcgccagtgccctgcgggaggagagggacgtgggcaaacta
aacatgccctccttactctgttcctacgtcacaaccgccttcatacccaccatcaagcct
cctattcctgatcccaacaacatccgggactttgtcagctaccccactgctggtaacgag
aggctgcactgcaccatgaagcgagcggaggacaacccagaggcagggggaccctgttac
accctctacctggaacacctaggtggtctggtgcccatcctcaaaggcagacgcatcagc
aagctacggccagagttcatcatcatagaccctaaaacagacagcaaagcagatgaggtg
tgtgtgaatgctatgatctcctacatgactgacagctgtaactgttcggactccagcgac
attgagttgagtgatgagtgggtcgggaagaagtcgcctaaactatccagaggaaacagg
tcacccaagctttccagaaggaacatggaatctagaaaatctcccaaaatgtcccgggct
agtcaagaaggcccacgatcaccccggttaccaacaaagaaacctccaattcgatctccc
agtttgacgcgtcgagagatgtccatggatggaatctctgagcataattatcttgctcaa
gtcacgtccaatatttgggggacaaagttcaaaatcgttggacttgcttctttcctacct
gctaatcttggtgcagttatctataagaccagtttgctccatctacaaccaaggcagatg
acaatctaccttccggaggtgcggaaaatatcacttgacttcatgagcctgcctgtcttt
aacccaaacgtcttcagtgaggatgaggatgacttgccagtgatgggaccatctggagtg
acaagtgacaaccctccctgtacggtcaacatccccatcgcacccatccacagccctgcc
caagccatgtcccccactcagagcattggactggtccaatccctgctggccaatcagaac
atccagctggatgtcttgaccaatcccacggctacggcttcagcagcagcggcggcggcc
gctgcagcagcctcagcctctattgcagggcctgatcacagtcagaatgcagtagcagca
cagtgcagtgggactctaggaaggtactccaacccaggacaggtgatctttaacgggcta
gagatgggtcccctcctagctggaacactacctccacctcctcctccacatcacctccct
caacaacctcaacaacaacgtcctcaatcgcaacagacacaccaacaacagtccaaacaa
ccacagcagatactaacccaacagcagcagcagcaacaacaacagagaatgcaacagcat
caacaactacagcaccagcaacagcagattcaacaacaacatcaacaactacaacagcat
catatacagcagatccaacagcagcagcagcaacagactcagcagcaccaagcactgcaa
caacagcaccaacaacaacaggcggcactgcaacagcaacaacagcagatccaacagcag
caccaacacttgcaacaacagcaaatcgctcagcagcaccaacagatgcagctgcagcat
gagcaaatgcatcagcagcagcagcaaatgcagcagcaacaacagcagatccgacagcag
attatagagatgaggcagcaacagcagcagctgcagcagcaacatcagcagatacaacag
caacaccaacagatgcagaggcagcaccaacaaatgcagcagcaactgaagctgcagatc
accttgccccctccgcctactggctatcccaccatctctctgcagcagttccaggtactg
caacagataccccaccccagtgcagagttgggaccagaaagaggagagcaggggcatact
cagagccatactctgggcaggccaagtctaccgcgatccaggcctccatcattcattgat
gtagacagcttacggtctagacctccttccttcatcgaagcagacacatcaagatctaga
ccaccgtcattcatcgacatagacacaatacggactagacctccttctttcattgatgca
gatacaggtacattgcggtctagacccccgttgttcctcgatgcagactcctcccgatcc
agacctccttcattcatagacacagacacactacggtctagacctccttccttcctcgat
gcagagacttcccttgagatccagatgaggaaggtgaaccctccaccaccctacccaggc
accgtagtttctgcagccaccgccacaacctccagcgctcctcagaccctcatcaccaac
tgtgacaaccccaacatactggtcacagcagacctgtgtctgaagaaagacgagttctca
ctccacccagttggtctccagtaccagatgggatacgagaggatcacaacctttgacagc
agtgggaatgtagaggaggtgtgtcgccctcgcagaagactcatacgcaaccagaacgcc
tacgctgttcaaggtatgggaggttctgccacacttaaagtcacctcatcgtctgacagt
aagaaagtccagcttccttacagctcagcgactctaagccgcctctctgtgccacgatac
tccatacccagcagagacccgcccccctacccagatccagccaatcaggttaacattaac
acgacgacacttcctccttcccagcgcatggacagtagtcacatgattcacgccaccttg
cgacctgaccggcgagacgtggaatctcgcctgaaggtgtcccagatggttgacgcttca
aggactctaccaaccaagtctaaggtcaacagtgctgccctagcgctctcttaccagcag
agggtgcccacggctctgtatacctgcactcagtgcagcagcaacagcagcagcagcagc
agcaccagtgtcagtgttagtggtggtgctagtagcagcagtggcatcgcaggaggcact
gtagtgcgacaggatttcccaccaggaaaaggtgctcatcacagcaccatcattgttcac
tccaaaagcacttcgcctcaagcttctcagtcatcttacaatctgctgagtcctgttgat
aacagcagggataggactgtgtatgtgaactctgcctttaccgaagacgagacattaagt
cagcagtgtcgtcacttgactcttggggaagttagtttgactctgaaacgtcctccacca
taccagtgggacccaaacactgcagaggagttctggatacccccagaacagactatctta
gctcctcctccaccaccaacgcacaaaccaccacccccgatcatcttcagcaatgctcag
catctggacatgacacggctgccttttgtactctcaacaaaacctcccagcagcccaagt
actgttactttcccatcaggttaccagatctccatgtcacctttccctccaggggtaggt
caggatggatccccactccagtccatgcagagcattccaccaccctgccctcccaacgaa
gtagttgctccagtcccccagttttcccagcaggaccccaacctggtcttgccacctgga
taccctcccaatcatgccaacctagcttgctgccctctgcccccgatgtacccaggggcc
acctcctgtgctgggcttcagctgcaccctgttagcctgcacccctggaacccatatagc
ctacccatgcaggacctgtcaggctctgccaccctccccagcaagtctcatcaggtgtta
gagaagccagtcctctccccacctccttctattgttccccccccaccacctcttacactt
cctcctcctccaccaaccgaactgccgaaatccaaaagccctacaaaggagctggcggaa
tctgccagtagcttccaggagccgtcttctctaaacgaaagccccgttccagaccgacag
gggtccgacatgttcagcaagaaaagtcgtaaacgtctcgacagccgagccgaggctgca
aacatgaccaccgtctcagagagcaaatccaaaaaggaagggcgcgcactctccgacttc
aactccctcatctccagccccaggcttggcggcagggagaagaagaaactcaaaggccag
agggagcagctgaacaaaaccaagaagctcaacaggaccagtaccaccagcgagttccag
gacagttcggagagcgagcccgagctcttcatcagcggagacgaactgatgaaccagagc
cagagctccaagaagggttggaagagtaagaggagcctgaggatggccagtgaactggag
gagattaagtgcaggaaggccaatgagagagaggaccgcgggctgggcagccagggattc
atctatgtcatggccaataagcagccactctggaatgaggccacacaggtctaccagttg
gacttcggaggacgggtcactcaggagtctgctaagaactttcagatcgagctggacggg
agacaggtgatgcagtttggcagaatcgatgggaacgcatatatcctggatttccagtat
cctttctcagcagtgcaagcctttgctgttgccttagccaatgttactcaaaggctgaag
taa
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