Salvelinus sp. IW2-2015 (Arctic char): 111963610
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Entry
111963610 CDS
T05762
Name
(RefSeq) permeability factor 2
KO
K12671
C-X-C motif chemokine 10
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04060
Cytokine-cytokine receptor interaction
salp04620
Toll-like receptor signaling pathway
salp04622
RIG-I-like receptor signaling pathway
salp04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111963610
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111963610
04622 RIG-I-like receptor signaling pathway
111963610
04623 Cytosolic DNA-sensing pathway
111963610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111963610
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111963610
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Chemokines
111963610
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Chemokines
111963610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
111963610
NCBI-ProteinID:
XP_023842904
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All DBs
Position
LG5:complement(3187521..3188649)
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AA seq
116 aa
AA seq
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MKTATFILLCVTVFGAGLAHSPGGRSEKCLCRGKLLQSVRIKRIQKLEVYPNSVFCAKTE
MIATMKNGKKKCLNPEAKLGKRFLMRKREQQKRKGGLGRKNKNNYNPRVGTELENR
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagcaactttcatcctgctttgtgtcacagtcttcggagctggacttgctcat
tcccctggtggaagatctgagaaatgtctatgcaggggaaaactactgcagtctgtgagg
ataaagcgcatccagaagttagaggtgtacccaaattctgtkttctgtgcaaagacagaa
atgattgccacaatgaagaatggtaagaaaaaatgtctgaacccagaggccaagctagga
aaacgattcctgatgagaaaaagggagcaacagaagcgaaaaggaggactgggaaggaaa
aacaaaaataattataatcccagagttggtacagaattagaaaatagatga
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