KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111963631
Entry
111963631         CDS       T05762                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111963631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:salp03019]
    111963631
   03041 Spliceosome [BR:salp03041]
    111963631
   03032 DNA replication proteins [BR:salp03032]
    111963631
Messenger RNA biogenesis [BR:salp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     111963631
Spliceosome [BR:salp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    111963631
  U2 snRNP components
    111963631
 Complex B
  U1 snRNP components
    111963631
  U4/U6.U5 tri-snRNP components
    111963631
 Complex C
  U2 snRNP components
    111963631
DNA replication proteins [BR:salp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     111963631
SSDB
Motif
Pfam: LSM Kringle ATP-grasp_2 TSP9
Other DBs
NCBI-GeneID: 111963631
NCBI-ProteinID: XP_023842915
LinkDB
Position
LG5:complement(15281633..15284882)
AA seq 128 aa
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTHRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVAARGRGRGGGMGR
GTIFPKRR
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtccattggtgtgcccatcaaagttctgcatgaagcagagggccacatygtgacctgt
gagaccaacactggtgaagtgtacaggggcaagctcattgaggctgaggacaacatgaac
tgccagatgtccaatatcactgtgacgcatcgggatggccgtgtagcccaattggagcag
gtctatatccggggcagcaagattcgcttcctgatcctaccggacatgttaaaaaacgcc
cctatgttaaagagcatgaaaaacaagaaccagggctctggagcaggacgggggaaggca
gccattctcaaagctcaggtggctgcaagaggacggggtcgtggtggagggatgggaaga
ggaaccattttcccgaaaaggcggtag

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