Salvelinus sp. IW2-2015 (Arctic char): 111963743
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Entry
111963743 CDS
T05762
Name
(RefSeq) claudin-4-like
KO
K06087
claudin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03272
Virion - Hepatitis viruses
salp04382
Cornified envelope formation
salp04514
Cell adhesion molecule (CAM) interaction
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
111963743
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111963743
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111963743
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111963743
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111963743
04147 Exosome [BR:
salp04147
]
111963743
Cilium and associated proteins [BR:
salp03037
]
Other cilia and associated proteins
Stereociliary proteins
111963743
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
111963743
Exosomal proteins of colorectal cancer cells
111963743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF1218
Motif
Other DBs
NCBI-GeneID:
111963743
NCBI-ProteinID:
XP_023843004
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All DBs
Position
LG5:complement(35036547..35037672)
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AA seq
351 aa
AA seq
DB search
MLSSMLEVVGIALGVIGLILTIVICALPTWIVTTIIAGNVATTKVVWYGLWMSCVTQGTG
KTQCEVCNPRGNGKYDLQPARAMILTAIILGVLGVMVSMVGAKCTNCIKDKTSQAKLIII
AGILFILAGILILIPVSLLARSIISDSSTRIKGKPELGASLYFGWVAASLLLIGGVLLCI
TVGVFGWMMGIFGWIVSLVXCALSIXYYPPPPYWGMWKVLXTITSISSILGALGVMGSIF
GTXCCNCIKSNRIRVKARFIVGIFFILAGILQLTTEIVVVHYLITDVQRRFDIFAKFIIF
NLVLLAEVSSWSACMLLIGGTILCCSIFKRNQSDSTTTRQPPANSSVFNRS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgtctatgttggaggtcgtgggcatcgccctgggagtcataggattaatactg
accattgtgatctgtgctctccccacctggatagtgacaaccattatagcaggtaacgtt
gccaccacaaaggtggtctggtacggcctgtggatgagctgtgtgacccaaggcacggga
aagacacagtgtgaggtgtgcaaccccagggggaatgggaaatatgatctgcagcctgcc
agagccatgatcctcactgccatcatcctgggggttctgggggtcatggtctccatggtc
ggagcgaagtgcaccaactgcatcaaagacaaaacgtctcaggccaagttgataattatc
gctggaatacttttcatcctggccggaattctcatcctcatccctgtttccttgctagcc
agatcaatcatcagcgactcctccacgcggatcaaagggaagcctgagttgggggcctcg
ctgtacttcggctgggtggcggcctccctgctcctgattggaggggtcttactgtgcatc
actgtgggagtgtttggatggatgatgggaatctttggatggatagtctccctagtgscc
tgtgctctmtcwataakgtattatcctccgcccccttattggggcatgtggaaggttctg
atracgatcacctccatctcctccatcctgggagctctaggagtgatggggtcyatcttt
gggaccargtgctgtaactgcatcaagagtaacaggatcagggtcaaggccaggtttatt
gttggaatattcttcatcctggccggtatcctgcagctcaccactgaaattgtggttgtc
cattacttgataacggatgtccaacggcgattcgatattttcgccaagtttatcatattc
aacctggttttgttagctgaagtcagtagctggtccgcctgcatgctcctgataggaggg
accatactctgctgctccatattcaagaggaaccagtcagactcaacgacgactcgtcaa
cctcccgctaacagctctgtcttcaacaggtcatag
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