KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111963753
Entry
111963753         CDS       T05762                                 
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:salp03009]
    111963753
Ribosome biogenesis [BR:salp03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    111963753
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_CDC20-Fz EIF3I WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st CFAP251_N NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR41 Beta-prop_WDR75_1st DSE1_N ASA1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_NOL10_N Beta-prop_IP5PC_F Beta-prop_Aladin Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_IFT140_1st PAC11 PEP5_VPS11_N Beta-prop_WDR75_2nd Beta-prop_DCAF12 WD_LRWD1 Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_WDR19_1st WDR54 WD40_like Beta-prop_BBS7 LAIKA
Other DBs
NCBI-GeneID: 111963753
NCBI-ProteinID: XP_023843015
LinkDB
Position
LG1:complement(26447867..26454000)
AA seq 483 aa
MSSFFIKKKGPPKVFKKNENSAGSKRKNDTDTGNKLKKKLNSKHNEEISSDSETEGFSLH
RKRRANGEEEFDETPQEKKLRLAKLYLDQLRDEEEKKAEEESFEMDLIAGRLQEEVLEQK
GQLQRMVAKDLLPPDVSEICLLRGHKLPVTCLVISPDDQHVFSASKDCSIIKWDVESGKI
LHTIAGGRKGTEDRHVGHTAHVLCMSISSDGKYLATGDMNKLIMIWEAETCKHLYKFTGH
RGPVSGLSFRRGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDVITGLDSGSRERCVTA
GGRDRTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKKPLST
VKAAHGRHSDSGLEQPYWVAAVAALQNSDTVASGSHNSKVQLWKCGQGFRHLEPLFSIPV
NGFVNSLKFSSSGKFLVAGVGQEHSGCCFQAWSMVETERREERTLHYSSETTTARAGRGE
WRK
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgtcgtctttctttataaagaaaaaaggacccccaaaggttttcaaaaagaacgagaat
tcagcaggttcaaaacgaaagaatgatacagacacaggaaacaaactcaagaaaaaacta
aattcaaagcacaatgaagaaatctccagcgactctgaaacagaaggtttttcactgcac
agaaaacggagggccaatggcgaagaagagtttgatgagaccccacaagagaaaaaacta
cgattagctaaactttacctcgaccaattgagggatgaggaagaaaagaaggcagaggag
gagtcctttgagatggacctgattgctggaagacttcaagaagaagtgcttgagcagaaa
ggacagctccaacggatggttgcaaaagatctcctgccaccagatgtgtccgagatttgt
ctgttgaggggccacaagctgccagtcacctgtctggtcatctctcctgatgaccaacat
gtattttccgcttccaaagactgctccatcatcaaatgggatgttgagagtggtaagata
cttcatacgatagctggtgggaggaaaggaacagaggatcgccatgtgggacatacggcc
catgtcctatgtatgtctatatcatcggacggcaaatacctggctactggagacatgaat
aagttgatcatgatctgggaggcagaaacatgtaaacacctatacaagttcacaggacat
agaggcccagtatcgggcctatccttcaggaggggcacccatgacttgtacagtgcctct
catgaccgctccatcaaggtgtggaacgtggacgaaaatgcctatgtggaaacactgttt
ggtcaccaggatgtgatcacagggctggacagtgggagtcgggagcgctgtgtgactgca
gggggtagggaccgcactgtgagggtgtggaagatcgctgaggagtcccagctagtgttc
catggccatgagggctccattgactgtatccagctcattaacgaggaacacatgataaca
ggcgctgatgatggctctgtctccctgtggagtgtgaacaaaaagaagccccttagcacg
gtgaaggcagcccacggtcggcatagcgactcgggactggagcagccctactgggtagcg
gccgtggcagctctgcagaactctgacaccgtagcctcagggtcccacaactctaaagtg
cagctgtggaaatgtggtcaggggttccgtcatctggagcctctcttcagcatccctgtg
aatggttttgtcaacagtctaaagttctccagttctgggaagttcctggtggcaggagta
ggacaggagcacagcggttgttgttttcaggcttggtcgatggtggagactgaaagacgc
gaagaacggactctacattattcctctgaaacgacaacagccagagcaggaagaggtgaa
tggagaaaataa

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