Salvelinus sp. IW2-2015 (Arctic char): 111963753
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Entry
111963753 CDS
T05762
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salp03009
]
111963753
Ribosome biogenesis [BR:
salp03009
]
Eukaryotic type
90S particles
Other 90S particles
111963753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
WDR54
WD40_like
Beta-prop_BBS7
LAIKA
Motif
Other DBs
NCBI-GeneID:
111963753
NCBI-ProteinID:
XP_023843015
LinkDB
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Position
LG1:complement(26447867..26454000)
Genome browser
AA seq
483 aa
AA seq
DB search
MSSFFIKKKGPPKVFKKNENSAGSKRKNDTDTGNKLKKKLNSKHNEEISSDSETEGFSLH
RKRRANGEEEFDETPQEKKLRLAKLYLDQLRDEEEKKAEEESFEMDLIAGRLQEEVLEQK
GQLQRMVAKDLLPPDVSEICLLRGHKLPVTCLVISPDDQHVFSASKDCSIIKWDVESGKI
LHTIAGGRKGTEDRHVGHTAHVLCMSISSDGKYLATGDMNKLIMIWEAETCKHLYKFTGH
RGPVSGLSFRRGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDVITGLDSGSRERCVTA
GGRDRTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKKPLST
VKAAHGRHSDSGLEQPYWVAAVAALQNSDTVASGSHNSKVQLWKCGQGFRHLEPLFSIPV
NGFVNSLKFSSSGKFLVAGVGQEHSGCCFQAWSMVETERREERTLHYSSETTTARAGRGE
WRK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctttctttataaagaaaaaaggacccccaaaggttttcaaaaagaacgagaat
tcagcaggttcaaaacgaaagaatgatacagacacaggaaacaaactcaagaaaaaacta
aattcaaagcacaatgaagaaatctccagcgactctgaaacagaaggtttttcactgcac
agaaaacggagggccaatggcgaagaagagtttgatgagaccccacaagagaaaaaacta
cgattagctaaactttacctcgaccaattgagggatgaggaagaaaagaaggcagaggag
gagtcctttgagatggacctgattgctggaagacttcaagaagaagtgcttgagcagaaa
ggacagctccaacggatggttgcaaaagatctcctgccaccagatgtgtccgagatttgt
ctgttgaggggccacaagctgccagtcacctgtctggtcatctctcctgatgaccaacat
gtattttccgcttccaaagactgctccatcatcaaatgggatgttgagagtggtaagata
cttcatacgatagctggtgggaggaaaggaacagaggatcgccatgtgggacatacggcc
catgtcctatgtatgtctatatcatcggacggcaaatacctggctactggagacatgaat
aagttgatcatgatctgggaggcagaaacatgtaaacacctatacaagttcacaggacat
agaggcccagtatcgggcctatccttcaggaggggcacccatgacttgtacagtgcctct
catgaccgctccatcaaggtgtggaacgtggacgaaaatgcctatgtggaaacactgttt
ggtcaccaggatgtgatcacagggctggacagtgggagtcgggagcgctgtgtgactgca
gggggtagggaccgcactgtgagggtgtggaagatcgctgaggagtcccagctagtgttc
catggccatgagggctccattgactgtatccagctcattaacgaggaacacatgataaca
ggcgctgatgatggctctgtctccctgtggagtgtgaacaaaaagaagccccttagcacg
gtgaaggcagcccacggtcggcatagcgactcgggactggagcagccctactgggtagcg
gccgtggcagctctgcagaactctgacaccgtagcctcagggtcccacaactctaaagtg
cagctgtggaaatgtggtcaggggttccgtcatctggagcctctcttcagcatccctgtg
aatggttttgtcaacagtctaaagttctccagttctgggaagttcctggtggcaggagta
ggacaggagcacagcggttgttgttttcaggcttggtcgatggtggagactgaaagacgc
gaagaacggactctacattattcctctgaaacgacaacagccagagcaggaagaggtgaa
tggagaaaataa
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integrated database retrieval system
