Salvelinus sp. IW2-2015 (Arctic char): 111963772
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Entry
111963772 CDS
T05762
Name
(RefSeq) TBC1 domain family member 13
KO
K24796
TBC1 domain family member 13
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111963772
Membrane trafficking [BR:
salp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
111963772
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3528
Motif
Other DBs
NCBI-GeneID:
111963772
NCBI-ProteinID:
XP_023843036
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Position
LG5:1353809..1371663
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AA seq
400 aa
AA seq
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MSSSYRIRIQDFKVALSEEKLDLKVLRELCFSGIPFEGGIRALCWKVLLNYLPLDQMIWD
SFLKKQREVYSQFLKEMIIQPGIAKANLGLSREDVTMEDHPLNPNPDSKWNNYFRDNEVL
LQIDKDVRRLYPDMAFFQRPTDYPCQLILDPQNDYETLRRRVEQTTLKAQTVDRNRSGVT
NVSSPGKALNLYPSNEYEVLPSGCEAHWEVVERILFIYAKLNPGIAYVQGMNEVVGPIYY
TFATDPNNEWKEHAEADTFFCFTNLMSENRDMFIKSLDDSQCGITYKMESVYSMLKEKDM
DLYMKLQEQNIKPQYFTFRWLTLLLSQEFLLPDVIRIWDTLFSDQDRFDFLILVCCAMLV
LIRDQLLAGDFTVNMRLLQDYPISDVHTILAKAKELQGGS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtctagctcttacagaatcaggatccaggatttcaaggtggccttgagtgaagagaag
cttgacttaaaggtgcttcgggaactttgctttagcggtatcccgtttgaaggaggcatc
cgtgcactttgctggaaagtcctgctcaattacctgcctttggaccagatgatatgggac
tccttcctcaaaaagcagagggaggtgtattcccagttcctaaaggagatgatcatccag
ccaggcatcgctaaggccaacctgggcctctccagagaggacgtgactatggaggaccac
cctctcaaccccaacccagacagcaagtggaacaactacttcagagataacgaggtgctg
ctacagattgataaagatgtccggcgcttgtaccccgacatggcgttcttccagcggccc
acagactacccctgccagctgatcctggatccccagaacgactacgagacactcaggcgc
cgtgtggaacagactaccctcaaggcccaaactgtggaccgcaaccgcagcggggtcacc
aatgtgagctccccgggcaaggcccttaacctgtacccgtccaacgagtacgaggtgctg
cccagcggctgcgaggcacactgggaggtggtggagcgaatcctgttcatctacgccaag
ctcaacccgggcatcgcctacgtgcagggcatgaacgaggtggtgggccctatctactac
acctttgccaccgaccccaacaacgagtggaaagagcacgccgaggcagacaccttcttc
tgcttcaccaacctgatgtcagagaaccgggacatgttcatcaagagcctggacgactcg
cagtgcggcatcacctacaagatggagagtgtctactccatgctcaaagagaaggacatg
gacctctatatgaaactgcaggagcagaacatcaagccgcagtacttcaccttccgctgg
ctgaccctgctgctgtcccaggaattcctcctgcccgacgtcatccgcatctgggacacg
ctcttctccgaccaggaccgcttcgacttcctcatcctggtctgctgcgccatgctcgta
ctgattcgagatcagttgctggcaggagacttcacggtcaacatgagactgctgcaggac
taccccatctcagatgtccacaccatcctggccaaggccaaggagcttcagggtggctca
tag
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