Salvelinus sp. IW2-2015 (Arctic char): 111963777
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Entry
111963777 CDS
T05762
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04210
Apoptosis
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111963777
09142 Cell motility
04820 Cytoskeleton in muscle cells
111963777
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111963777
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
111963777
Intermediate filaments
Intermediate filament-binding proteins
111963777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
Rop-like
Motif
Other DBs
NCBI-GeneID:
111963777
NCBI-ProteinID:
XP_023843048
LinkDB
All DBs
Position
LG5:complement(1647475..1688185)
Genome browser
AA seq
2309 aa
AA seq
DB search
MATSEELGQDLEHVEVLQKKFEEFQTDLAAHEERVNEVNQLAGKLSQESHPEAELIVRKQ
EEVNAAWQRLKGLAQQRQGRLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASV
QALLRKHEGLERDLAALEDKVNTLGGEAERLQQTHPQNASQIHLKRDELITNWEQIRTLA
AERHAHLNDSYRLQRYTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEI
DAHEDSFKATDEAGQALLNTGHYALEEVKEKLGVLTEEKESLLELWEVRRQQYEQCMDLQ
LFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFA
TKLIQNNHYAKEDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFFRDSDELKSWIN
EKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYAADEVS
VRMDEVSSQWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDL
TSVQNLQKKHALLEADVAAHQDRIDGITIQARQFQEAGHFDGDNIKRKQEALVARYDALR
DPMAARKQKLSDSLRLQQLFRDVEDEETWVREKEPIAASTNRGKDLIGVQNLLKKHQALQ
AEIAGHEPRIKAVTQKGEAMVEEGHFAGEEVKVKLGELNGRWDTLKGKAGQRRQDLEDSL
QAQQYFADANEAESWMREKEPIVSSPDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALK
EQAQSCRQQVAPTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVN
DRQGFVPAAYVKKLDPTQSSSRENLLDEQGSIGLRQDQIENQPGAKETCSVSVRMKQVEE
LYGTLLELGEKRKDMLEKSCKKFMLFREANELQQWINEKEGALTNEEVGSDLEQVEVLQK
KFDDFQKDLKANESRLRDINKVASELESEGLMAEEAHMVQAQEQVMVGSVPGKDDTDSKN
ASPWKNVRVAVQTTANFNTIKELNNRWRSLQQLAEERSNMLGSAHEVQRFHRDADETKEW
IEEKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVKSLGETAERLIQSHPEAVD
DIQEKCTELNTAWSSLVARADQRKDKLGNSHDLQRFLSDFRDLMSWINGIRSLVSSEELA
KDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALDHERA
DLEKAWVQRRMMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHE
DFDKAINVQEEKIAALQSFADQLVGADHYAKPEIFKRRNEVLDRWRRLKAQMIEKRSKLG
ESQTLQQFSRDVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANA
DRIRGVIDTGNALIQRGACAGSEDAVQSRLGALDEQWQFLVNKSAEKSQKLKEANKQQNF
NTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADS
LTASTAFDPTQVKDKRNAVNGRFAKIKSMAAGRRAKLNESHRLHQFFRDLDDEESWIKEK
KLLVSSEDYGRDLTGVQNLRKKHKRLEAELGAHEPAIQSVQDTGKKLSDDNTIGQEEIEQ
RLGQFEEHWTELKDLAAARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLA
AVQGLLKKHEAFETDFTVHRDRVNDVCSNGDELINKNNHHVDSISAKMTSLRGKVSELER
AAAMRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDA
GLQAFQQEGITNITALKDQLLAAKHVQSKAIEARHAALMKRWNQLLDNSQARKKKLLEAQ
DHFRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALRDAHEAFRSSLSSA
QADFNQLAELDRQIKSYQVVSNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEEN
DKLRQEFAQHANAFHQWLQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLK
KIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTED
ALKEFSMMFKHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFESILDTVDPNRD
GNVSLQEYMAFMISRETENVKSSEEIESAFRALSVDAKPYVTKEELYQNLSKEQADYCIS
HMKPYLDSKGREMPSAFDFVEFTRSLFVN
NT seq
6930 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcggaggagctgggccaggacttggagcatgtggaggtgctccagaagaag
tttgaggagttccagacggacctggcggctcacgaggagcgtgtgaacgaagtgaaccag
ctagcgggcaagctgagccaggagtctcaccccgaggcggagctcatcgtccgcaagcag
gaggaggtgaacgccgcctggcagaggctcaagggcctggcgcagcagaggcagggcagg
ctgtttggagccgccgaggtgcagcgcttcaacagggatgtggacgagaccatcagctgg
atcaaggagaaggagcagctcatggcgtccgatgactttggccgggacctggccagcgtt
caggccctgctgcgcaagcacgagggtctggagagagacctggctgccctggaggacaag
gtcaacactctggggggagaggctgaacgtctgcagcagacccatccccagaacgcttcc
cagatccacctgaagagggacgagctcatcaccaactgggagcagatccgcacgctggcc
gctgagcgccacgcccacctcaacgactcctacaggctgcagcgctacactgcagacttc
cgtgacctgaccagctgggtgacggagatgaaggccctgatcaacgctgacgagctggcc
aatgacgtggccggagccgaggctctccttgaccgccaccaggagcacaagggtgagatt
gatgcccatgaggacagcttcaaagccacggacgaagccggtcaggccctgctcaacacc
ggacactacgccttagaggaggtcaaggagaagctgggtgtcctgactgaagagaaggag
tctctgctggagctgtgggaggtgcgcaggcagcagtacgagcagtgcatggacctgcar
ctcttctacagggacacagagcaggtcgacaactggatgagcaagcaagaggctttcctt
ctgaacgaggaccttggtgactctctggacagcgtggaggccttgcttaagaaacacgag
gactttgagaagtccctcagcgcccaggaggagaagatcactgccctggatgaatttgcc
accaaactgatccagaacaaccactatgccaaggaggatgttgctactcgtagagatgct
ctgctgagccgccgcaacgccctgcacgagcgtgctcagtcacgccgcgccgctctggag
gactccttccacctgcagcagttcttccgtgactcggacgaactcaagagctggatcaat
gagaagatgaagacggccaccgacgaagcctacaaggacccgtccaacctgcagggcaag
gtccagaagcaccaggccttcgaggcggagctgtcagccaaccagagccgcatcgatgct
ctgcagaagtctggccaggagctcctagacgggaagcactacgccgccgacgaggtgtct
gtacgcatggacgaggtcagctcccagtggaagaagctgctggaggccaccgaactcaaa
ggcatcaagctgcgcgaggccaaccagcagcagcagttcaacagaaacgtggaggacatt
gagctgtggctgtatgaggtcgagggccacctggcgtcagatgactacggcaaggatctg
accagcgtccagaacctgcagaagaagcatgccctgctggaggctgacgtggctgcccac
caggaccgcatcgatggcatcaccattcaggcgcgtcagttccaggaagccggtcacttt
gacggcgacaacatcaagcgcaagcaggaggcgctggtggcgcgctacgatgccctccgc
gaccccatggccgcccgcaagcagaagctgtcagactccctgcggttgcagcagctcttc
agggacgtggaggacgaggagacctgggtccgggagaaggagccaatcgccgcctccacc
aaccggggaaaagacctgatcggcgtccaaaacttgctgaagaagcaccaggccctgcag
gcggagatcgccggccatgagccccgcatcaaggccgtcacccagaaaggagaggctatg
gtggaggaaggccactttgctggggaggaggttaaggtgaagctgggggagctgaacggc
cgctgggacacccttaaaggcaaggccgggcagcgcaggcaggacctggaggactcactg
caggcacagcagtacttcgccgacgccaacgaggcagagtcctggatgagggagaaagag
cccatcgtgagcagtcccgactacggcaaggatgaggattcggctgaggccctgctgaag
aagcacgaagccctgatgtctgacctsagtgcttatggcagcagcatccaggctttgaag
gagcaggcccaatcctgcaggcaacaagttgcgcccaccgatgatgagactggcaaggag
ctggtgctggccctctatgactaccaggagaagagcccccgtgaggtcaccatgaagaag
ggagacatcctcaccctgctcaacagcaccaacaaggactggtggaaggtggaggtgaac
gaccgccagggctttgtgcccgcagcctacgtcaagaagctagaccccacccagtcctcc
tccagggagaacctgctggacgagcagggcagcatcggcctccgccaggaccagatcgag
aaccagccgggggcaaaggagacgtgcagtgtgtctgtacgcatgaagcaggtggaggaa
ctgtacggcactctcctggagctgggcgagaagcgcaaggacatgctagaaaagagctgc
aagaagttcatgctgttccgcgaggctaacgaactgcagcagtggatcaacgagaaggag
ggcgccctcaccaacgaggaggtgggctccgacctggagcaggtggaggtgctgcagaag
aagtttgacgacttccagaaggacctgaaggccaacgagtctcgtctgagggacatcaac
aaggtggcatctgagctggagtctgagggcctaatggcagaggaggcacacatggtccaa
gctcaggaacaagtaatggtgggttccgttcctggcaaggatgataccgactccaaaaat
gcttcaccatggaagaatgtacgcgtggctgttcaaacgacggctaactttaatactatc
aaggagctgaacaaccgctggaggtccctgcagcagctggctgaggagagaagcaacatg
ctggggagtgcccatgaggtgcagaggttccacagggatgcggatgagaccaaggagtgg
atcgaggagaagaaccaggccctgaacacagacaactacggccacgacctggctagcgtt
caggctctgcagcgcaaacatgagggctttgagagagacctggccgccttgggagacaag
gtgaagtctctgggggagacggcggagcgtctgatccagtcccacccggaggctgtggac
gacatccaggagaagtgcacagagctcaacacggcctggagcagcctagtggcgcgtgcc
gaccagcgcaaggacaagctgggcaactcccacgacctgcagcgcttcctctccgacttc
agggacctgatgtcctggattaacggcatccgaagcttggtctcctcagaggaactggcc
aaagatgtgaccggggctgaggccctgctggagagacaccaggagcaccgtactgagatc
gacgcccgtgcgggcaccttccaggcctttgagcagtttggccagcagctgttggcacgc
ggccactacgccagtccggagatccagcagaagctggaggccctggaccacgagagggcc
gacctggagaaggcctgggtccagagacgcatgatgctcgaccagtgcctggagctccag
ctgttcaaccgtgactgtgagcaggctgagaactggatggcagcgcgcgaggccttcctg
gccagcgacgacaagggcgactccctggacagcgtggaggccctcatcaagaaacacgag
gactttgacaaggccatcaatgtgcaggaggagaagatcgctgccctgcagtcctttgct
gaccagctggtcggcgctgaccactacgccaagcctgagatcttcaaacgtcgcaacgaa
gtcctggacaggtggcgccgtctgaaggcccagatgattgagaagcgttccaagctgggc
gagtcccagaccctgcagcagttcagccgtgatgtggatgagattgaggcctggatcagc
gagaagctgcagacggccaccgacgagtcctacaaggaccccaccaacatccagttgtcc
aagctgctgagtaagcaccagaagcaccaggcctttgaggcagagctgcacgccaacgca
gaccgcatccgtggggtcattgacacaggaaacgccctcatccagagaggggcctgcgcc
ggcagtgaggacgcagttcagtcgcgtctcggtgccctggatgagcagtggcagttcctg
gtgaacaagtcagcagagaagagccagaagctcaaggaagccaacaagcagcagaacttc
aacactggcatcaaggactttgacttctggctatctgaggtcgaggcccttcttgcgtct
gaagactatggcaaagacctggcctcagtcaacaacctgctgaagaaacaccagcttctg
gaagccgacatctctgctcatgaggatcgcctgaaggacctgaacggccaggccgacagt
ctaacggccagcacagccttcgaccccacccaggtcaaggacaagcgcaacgccgtcaac
ggacgcttcgccaagatcaagagcatggctgccggccgccgcgccaagctcaacgagtct
caccgcctgcaccagttcttcagggacctggacgatgaggagtcttggataaaagaaaag
aaattgctagtgagttcggaagactatggacgtgatttgacaggagtgcagaatctgagg
aagaaacacaagaggctggaggctgagctgggggcccacgagccagccatccagtctgtg
caggacactgggaagaagctgtctgatgacaacaccatcggccaggaggagatagagcag
aggctgggccagtttgaggagcactggacggagctgaaggacctggctgcagcaagggga
cagaggctggaggagtcgctggaataccagcagtttgttgcgaatgttgaagaggaggaa
gcctggattaacgagaagctgaatctggtgggaagcgaagactacggggataccctggcc
gccgtgcagggcctgttgaagaagcatgaggcgtttgagactgacttcaccgtgcacagg
gacagagtgaatgatgtgtgttccaacggagacgagctcatcaacaagaacaaccaccac
gtggacagcatctcagccaagatgacgtccctgcggggcaaggtgtctgagctggagagg
gccgctgccatgaggaaagccaagctggacgagaactctgccttcctgcagttcaactgg
aaggccgacgtkgtggagtcctggatcggtgagaaggagaacagcctgaagactgatgac
tacggacgagatctctcctctgtgcagacgttgctcactaagcaggagacgtttgacgct
ggtcttcaggccttccagcaggagggcataaccaacatcacggccctcaaggaccagctg
ctggcggccaagcacgtccagtccaaggccattgaggcccgccacgccgccctcatgaag
cgctggaaccagctgctagacaactcacaggctcgcaagaagaagctgctggaggcccag
gatcacttcaggaaggtggaagacctgttcctgacctttgccaagaaggcatcggccttc
aatagctggtttgagaatgcagaggaggacctgacggacccggtgcgctgcaactcgctg
gaggagatccgggctctgcgcgacgcccacgaggccttccgctcgtcgctgagctcggcg
caggccgacttcaaccagctggccgagctggaccggcagattaagagttaccaggtggtg
tccaacccctacacctggttcaccatggaggccctggaggagacctggagaaacctgcag
aagatcatcaaggaacgagagctagagttgcagaaggagcagaggaggcaggaggagaac
gacaagctgcggcaggagtttgcgcagcatgccaacgcattccaccagtggctgcaggag
accaggacatatcttctggatgggtcctgtatggtagaagagtccggaaccttggaatca
cagcttgaggcaaccaagcgtaagcaccaggagatccgggccatgcgcagccagctgaag
aagatagaggacttgggagcggccatggaggaagccctgatcctggacaacaagtacaca
gaacacagcacggtgggcctggcccagcagtgggaccagctagaccaactaggcatgagg
atgcagcacaacctggagcagcagatccaggctaggaacaccactggagtgacagaggat
gccctgaaggagttcagcatgatgttcaagcattttgacaaagagaagtctggccgttta
aaccatcaggagttcaagtcgtgtctgcgctcgctgggttacgacctgccaatggtggaa
gagggagaaccagaccccgagtttgagtccatcctcgacacggtcgatcccaacagggat
ggcaacgtgtccttgcaggagtacatggctttcatgatcagccgcgaaacagagaacgta
aagtccagcgaggagattgagagcgccttccgagccctcagcgtcgatgccaagccctac
gtcaccaaggaggagctctaccagaacctgagcaaggaacaggcagactactgcatctcg
cacatgaagccctacctagacagcaagggccgggaaatgccctctgccttcgactttgtt
gaattcacccgctcgcttttcgtcaactga
DBGET
integrated database retrieval system
