Salvelinus sp. IW2-2015 (Arctic char): 111963832
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Entry
111963832 CDS
T05762
Name
(RefSeq) beta-hexosaminidase subunit beta isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00511
Other glycan degradation
salp00513
Various types of N-glycan biosynthesis
salp00520
Amino sugar and nucleotide sugar metabolism
salp00531
Glycosaminoglycan degradation
salp00600
Sphingolipid metabolism
salp00603
Glycosphingolipid biosynthesis - globo and isoglobo series
salp00604
Glycosphingolipid biosynthesis - ganglio series
salp01100
Metabolic pathways
salp04142
Lysosome
Module
salp_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
111963832
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
111963832
00513 Various types of N-glycan biosynthesis
111963832
00531 Glycosaminoglycan degradation
111963832
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
111963832
00604 Glycosphingolipid biosynthesis - ganglio series
111963832
00511 Other glycan degradation
111963832
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111963832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
salp03110
]
111963832
Enzymes [BR:
salp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
111963832
Chaperones and folding catalysts [BR:
salp03110
]
Intramolecular chaperones
Others
111963832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Peptidase_C57
Motif
Other DBs
NCBI-GeneID:
111963832
NCBI-ProteinID:
XP_023843146
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All DBs
Position
LG5:5787302..5798350
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AA seq
547 aa
AA seq
DB search
MIATLKCTTLLLAVVVCRATQDYGYNDVEEXTLGDSQYGSLWPLPQKVKMSTVAFKLSGA
SFQIVDAKESSSGASCSLLQNAYRRYDEYIFPTSRMQGQNKKKAFASDVSELQVWITSAD
SECDSYPSVTSDESYELSVDSPVAVLKAPKVWGALRGLETFSQLVYEDEYGAKSINRTEI
QDFPRFAHRGLLLDSSRHFLPIKVILANLEAMAWNKFNVFHWHIVDDQSFPYMSRTFPQL
SQQGAYHPYTHVYTPSDVKMIIEFARLRGIRVVSEFDTPGHTQSWGKGQKDLLTPCYSGA
SPSGSFGPVNPILNTTYDFMAMFFKEVSTVFPDAYIHLGGEEVDFSCWKSNPDIQKFMAQ
QGFGTDYSKLESFYIQRLLDIVTTTNKGYMIWQEVIDNGVKLKADTLIHVWKGNQQQYQA
EMARVTASGYQALLSTPWYLNRISYGQDWQAAYKADPQDFNGTDAQKKLVVGGEACLWGE
YVDATNLTPRLWPRASAVGERLWSGKDVKDINDAYSRLIQHRCRMVQRGIPAEPLFTGYC
AHEYKGV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgacgctgaagtgtacaacattattacttgctgttgttgtctgccgggcaacg
caagattatggttataatgatgtcgaggagrctactctgggtgattctcagtatggatct
ctctggccgttgcctcagaaagtcaaaatgtcaacggtagcattcaaactcagcggtgct
agtttccagatagttgacgcgaaagaatcgtcttccggtgcgagctgcagccttcttcaa
aatgcatatcgaaggtatgacgaatacatattccccacttccagaatgcaagggcaaaac
aaaaagaaggcatttgcctctgatgtgtctgagttacaggtgtggatcacatcagctgac
tcggagtgtgacagctaccccagtgtgacatctgacgaatcatacgaactctcggtggac
tctcctgttgctgtgctgaaagcacctaaggtgtggggcgcgctgagaggtctggagact
tttagccagttggtgtatgaggatgaatatggagcaaaaagcatcaataggacagagatt
caggactttccacggtttgcacatcgaggcctcttattggacagctctcgtcacttcctg
cccatcaaagtcatcttagccaatctggaagcaatggcgtggaacaaattcaatgtgttc
cactggcacatagtagatgaccaatccttcccctacatgagccgtaccttcccccagctg
agccagcagggagcataccacccgtacacgcatgtgtacacgccctctgacgtgaagatg
atcattgagtttgctcgcctcaggggcattcgtgtcgtctctgagttcgacacccctgga
cacactcagtcatggggcaaaggccagaaggacctactgaccccctgttactctggagcc
agcccctctggctcgtttggaccggtcaaccctatcctcaacaccacctatgacttcatg
gccatgttcttcaaggaggtcagcacagtgttccctgatgcctacatccatctaggagga
gargaggttgacttcagctgctggaagtccaacccagacatccagaagttcatggcgcag
caaggctttgggacggactacagcaagctggagtctttctacattcagaggctcttggat
attgtcaccactactaacaagggctacatgatctggcaggaggtgattgacaatggagtt
aagctgaaggctgacacgctaatccacgtgtggaaaggcaaccagcagcagtaccaggct
gagatggcaagggtcacagcatcaggctaccaggccctgctctccacaccctggtacctg
aaccgcatctcctacggccaagactggcaggccgcttacaaggcagacccacaggacttt
aatggcacagatgctcagaagaagctggtggtcgggggagaggcctgtctgtggggggaa
tacgtggacgctaccaacctgacccccagactctggccccgtgccagtgctgtgggggag
cggttgtggagtggcaaggatgtgaaagacataaacgatgcttatagtcgtctgatccag
caccgctgtcgcatggtccagcgtggtataccagctgagcctctgtttacaggttactgt
gcacatgagtacaaaggggtatga
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