Salvelinus sp. IW2-2015 (Arctic char): 111963867
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Entry
111963867 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: protein polybromo-1-like
KO
K11757
protein polybromo-1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111963867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111963867
03036 Chromosome and associated proteins [BR:
salp03036
]
111963867
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111963867
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
111963867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111963867
NCBI-ProteinID:
XP_023843200
LinkDB
All DBs
Position
LG1:27310009..27349279
Genome browser
AA seq
1587 aa
AA seq
DB search
MSSKRRRATSPSSSSVSGGDFDDASSSTPGSGRKRRRPSNVPTVDPIAVCHEVYNTVRDH
KDDQGRLLCELFIRVPKRRKQPDYYEVVSQPIDMTKIQQKLKSEDYQDVEQLTADFQLMF
NNAKTYYKADGVEYQKACRLWELYVHTRNEFVQPGDGDEDDDDGEDILDNPALFTEDETP
PSCLKEVLEQLLDAVVSYTDHSGRVISELFQKLPSKVHYPDYYAVIKEPLDLRAITQRIQ
IGYYKSVTGMAKDVDLLVKNAKTYNEPGSQVLKDANIIKKVFIQRKTEIDHAEPTKTSVR
IKNRRSAQGDRFSAITLALQYGSENDEDALLSGSVHYDEGESEAECLSSSMDMGNPVFQL
XEAVRGGSNSQGPLLSEPFLQLPSRKXYPDYYQQIKQPIALQQIREKMKNGEYESVEQMD
SDLTLMFENAKCYNVPTSGISKRALRLQQILLLKKRELLRRGDEEEQDSILSSDTGTGSA
TKRKSHKKNMKNRMKALYAAVTEAREAGTNRRLCDLFMVKPSKKDYQDYYKVILEPMDLK
TIEHNVRSKRYATEEALMDDMRLMFRNARHYNEEGSQVYNDAGILEKIVKDKRKELGASP
EEDTDNMGSPKLKLRKSGVSPKKSNKCLTLLQQRLNELYDAVRNYTDARGRRISTIFLRL
PSRAELPDYYATIKRPIDMERLRSHMAGGRYQDVDALVEDFAVMFNNACTYNEPESLIYR
DALLLHRVLLDTRRLQEGGEEGGGSPPAVGPVVMELIRNLFVSVLAHQDEEGRCYSDSLA
EIPAQDPTSPENPPLNFDVIRANVDRGRYRRLDVFQEHMFNVLEKARRLHRTDSEIFEDA
VELQQFFIKIRDDLCKNGEILLSPALSYTSKHLHNDVEQEKREKVPKEIEEDKLKREEEN
KEEGEKAEDPAGGGAGPKRTYRQDCSFENSTYHVGDCVYVQPAEANLKPHIVCIERLWED
EAGEKWLYGCWFYRPSETFHLATRKFLKQEVFKSDYFNKVPISKILAKCMVMFVKDYFKL
QPEGVRPEDLYVCESRYSARNKAFKKIKMWAGPAGVRFVPRDVPLPVIRVASMYANRDQE
KLLAVVDNGSHSIVDKELEDVPVEMSGGEPGCQYYDQLHXNNMWLKVGDCVYVQSHGLVK
PRVGRIEKLWVLDGAAFFFGPIFIHPEETGHEPTRMFYKREVFLSNVEEACPMTCVIGKM
CVSSFKDYLSGRPTEVSEEDVFLCESRYIESEKQMKKFKGLKRFSLHAKVVDDEVYYFRK
LIVPQKEPSPLLNKKIEELELKLADMDEGDEDLDDLEDENEAPETPSMPTIQTPLASDLD
IMPYTPPPQSTPKAKGVSKKEGAKRKVNMSGYILFSSEMRSVIKTRHPDFSFGELSRLVG
TEWRNLEAPKKVEYEERAARVVERQEKERAAQQQASPRAGTPVGSMMGVVPSPSHMGMMP
GPGMMGPGMNGMQGSPGGHYYMQQPGMFSXGQQAPPPYPGQLGQPSHLQPMTPMFVAPPP
KTQRVLHSEAYLKYIEGLNAETDTVSKWDQSLKARRRDAHLSKDQESRLPSHWLKSKGAH
KTMADALWRLRDLMLRDSLNIRQVYNM
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaaaaggagaagggccacctctccatccagtagtagtgtgagcggaggggac
tttgacgatgcctcctcctccactcctggaagcgggcgaaagaggagaagaccctctaat
gtacctacggtagatcctattgctgtgtgccatgaggtgtacaacactgttagggaccac
aaggacgaccagggaagactgctttgtgagctgttcatcagggtaccaaagagaaggaaa
cagccagactactatgaggtggtgtcccagcccatagacatgaccaagatccagcagaag
ctcaagtcagaggactaccaagatgtggagcagctcactgctgatttccagctcatgttc
aacaacgcraagacctactataaggctgatggtgtggagtaccaaaaggcctgcaggctg
tgggaactctatgtccacaccaggaatgagtttgttcagccaggggatggtgatgaagat
gacgacgatggtgaagacatcctagataatcctgctctcttcactgaagatgagacccca
ccgagctgcctgaaggaggttttggagcagctgctagatgctgtagtgtcatacacggac
cactcaggaagggtcatcagtgagctcttccagaagctgccttccaaagtgcactaccca
gactactatgctgttatcaaggagccccttgatctgagagccatcactcagagaatacag
attggatactacaaaagtgtcaccggcatggctaaggatgttgaccttctggtgaaaaat
gcaaaaacatacaatgaaccaggatctcaggttttraaggatgctaacatcatcaagaag
gtcttcatccagaggaagactgagatagaccatgctgagcccactaagaccagtgtacgc
atcaagaaccggaggtcagcccagggagaccgtttctctgccatcaccctggctttgcag
tacggttcagagaatgacgaggacgccctgctctctggctctgtgcattatgacgagggt
gagtctgaggcggagtgcctgagctccagtatggacatgggtaacccagtgttccagctg
targaggctgtgagggggggcagyaacagccagggaccgctcctttctgaacccttcctc
cagctgccctccaggaaagawtaccctgactactaccagcagatcaaacagcccatcgcc
ctgcagcagatcagggagaagatgaagaatggggagtacgagagcgtggagcagatggac
tctgaccttactctgatgtttgagaacgccaagtgttacaacgtgcccacctcaggcatc
tccaaacgggccctccggctgcagcagatcctgctgcttaagaagagggagcttttgagg
agaggcgacgaagaggaacaggacagcattctgtcctctgacacaggaactggcagtgcc
accaagaggaaaagccataagaagaacatgaagaaccgtatgaaggcactgtatgctgca
gtgactgaagccagagaggcagggaccaaccggaggctctgtgatctgttcatggtcaag
ccctccaagaaggactaccaagactactacaaggtgatcctggagcccatggaccttaag
accatcgagcacaacgtccgctcaaagcgctacgccaccgaagaagccctgatggacgac
atgaggctgatgttccgcaatgcacgtcactacaacgaggagggatctcaggtttataac
gacgctggcatcctggagaagatagtgaaggacaagaggaaggagctaggagcttctccc
gaggaggacactgacaacatgggatctcctaagctgaaactaaggaagagtggtgtgtct
cctaagaagtccaataagtgcctgaccctcctgcagcagcgcctcaacgagctgtatgac
gctgtgaggaactacacagacgccagggggcgacgtatctccaccatcttcctgcgcctg
ccctcccgtgccgagctgcctgactactacgccaccatcaagaggcccatcgacatggag
cgcctgcgcagccacatggcgggcggccgttaccaggacgtggatgctctggtggaagac
tttgcagtgatgttcaacaacgcctgtacctacaacgagccagagtccctgatctaccgc
gacgctctgctcctccaccgcgtgctcctggatacccggcggctgcaggagggaggagag
gagggcggcggctctccccctgctgtagggcccgtggtcatggaactgatcaggaacctg
tttgtgtctgtgctggcgcaccaggacgaggaggggaggtgttacagcgactcactggct
gagatccctgcccaggacccgaccagcccggagaaccctccgctcaacttcgacgtgata
cgggccaacgtagaccgaggacgctaccgcaggctggacgtgttccaggagcacatgttc
aatgtgctggagaaggccaggcgcctgcacaggacggactctgagatctttgaggatgcg
gtggagctgcagcagttctttataaagatccgggatgayctgtgtaagaacggagagatc
ctcctctcccctgcgctcagctacacctccaaacacctgcacaatgacgtggagcaggaa
aagagagagaaagtacctaaggagatagaggaggacaaactgaagagggaggaggagaac
aaagaggagggagagaaggctgaggacccagctgggggaggtgcggggccaaagaggaca
taccgtcaggactgcagctttgagaacagcacctaccacgtgggtgactgtgtctacgtg
cagccagcagaggccaacctcaagcctcacatcgtctgcatcgagcgcctgtgggaggat
gaagcaggtgagaagtggctgtatggctgttggttctacaggcctagtgagaccttccat
ctagccacacgcaagttcctcaagcaagaggtcttcaagagtgactacttcaacaaagta
ccaatcagcaagatactggcaaaatgcatggtcatgtttgtcaaggattacttcaagctt
cagcctgagggagtaagaccagaggacytgtatgtctgtgagtcccgttactctgccagg
aacaaggccttcaagaaaatcaagatgtgggccgggccagccggcgtgaggtttgtccct
cgggatgtgccattgcccgttatccgggtggcctccatgtatgccaaycgtgatcaggag
aaactgttggccgtggtcgataacggcagccacagtatcgtcgacaaggagcttgaggat
gtcccggtagagatgagtggaggggagccaggctgtcagtactacgaccagctccactyc
aacaacatgtggctgaaggtgggagactgtgtctacgtccagtcacatgggctcgttaaa
ccccgtgtcggcaggatagagaagctgtgggtgctcgacggcgcagcatttttcttcgga
cccatcttcatccacccagaggagacaggacacgagcccaccaggatgttctacaagaga
gaggtgttcctcagcaacgtggaggaggcctgcccratgacctgcgtcataggtaaaatg
tgtgtgtcgtcctttaaggactacctttcgggtcggcccactgaggtgtctgaggaggac
gtgtttctgtgtgagagccgttacattgagagtgagaagcagatgaagaagtttaagggc
ctgaagcgcttctccctccacgctaaggtggtggacgacgaggtctactacttcaggaag
ttgatagtgccccagaaggagccatctcctctgctgaataagaagattgaggaactggag
ctgaaactggcagacatggatgagggggatgaggatctggatgacctggaggatgagaac
gaggctccagagaccccctccatgcccaccattcagacccctctggcaagcgatttggac
atcatgccttacacccctcctccccagtccacccccaaggcgaagggcgtttctaagaag
gaaggagccaagaggaaggtcaacatgagtggttatatcctattcagcagtgagatgcgt
tcggtcatcaagacccgccaccctgacttctccttcggggagctcagccgtctggtgggc
accgagtggaggaacctggaggctcccaagaaagtagagtatgaagagcgagcagccagg
gtggtggagcggcaggagaaggagagggcagcccagcagcaagcatccccgagagcaggt
accccagtagggtccatgatgggggtggtgccttcgcctagccacatgggaatgatgcct
ggtccaggtatgatgggtcctggtatgaatggcatgcaaggaagtcccggaggccactac
tacatgcaacagcctgggatgtttagcckggggcagcaggctcctccaccctacccaggc
cagctaggccagccctctcacctccagcccatgactcccatgtttgtggctccaccgccc
aagacacagagggtgcttcactctgaggcctacctcaagtacatcgagggcttgaacgca
gagaccgacacagtcagcaagtgggaccaatctctcaaagcgcgtcggagagatgcccac
ctgtccaaagaccaggagagcaggctcccttcccattggctgaagagcaagggagcccac
aagacgatggcagatgcactgtggcgcctgcgggacctgatgcttcgagactcactgaac
atacgtcaggtgtacaacatgtaa
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integrated database retrieval system
