Salvelinus sp. IW2-2015 (Arctic char): 111963868
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Entry
111963868 CDS
T05762
Name
(RefSeq) tubulin alpha chain, testis-specific
KO
K07374
tubulin alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04145
Phagosome
salp04210
Apoptosis
salp04530
Tight junction
salp04540
Gap junction
salp04814
Motor proteins
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111963868
09143 Cell growth and death
04210 Apoptosis
111963868
09144 Cellular community - eukaryotes
04530 Tight junction
111963868
04540 Gap junction
111963868
09142 Cell motility
04814 Motor proteins
111963868
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111963868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111963868
03036 Chromosome and associated proteins [BR:
salp03036
]
111963868
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111963868
04147 Exosome [BR:
salp04147
]
111963868
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111963868
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
111963868
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
111963868
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111963868
Exosomal proteins of other body fluids (saliva and urine)
111963868
Exosomal proteins of colorectal cancer cells
111963868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
111963868
NCBI-ProteinID:
XP_023843197
LinkDB
All DBs
Position
LG5:complement(9315153..9318428)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSNKAVGGGDDSCNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNFARGHYTIGKEIVDLVLD
RVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPSPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICSRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPXISAEKAYHEMLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEAEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagtgcatctctatccacgttggtcaggccggtgtgcagatcgggaatgcctgc
tgggaactgtactgcttggaacatgggatccagcccgatgggcagatgcccagtaacaaa
gccgtcggcggaggggatgactcatgcaacaccttcttcagcgagaccggagcgggaaaa
catgtcccccgtgctgtgtttgtggacctcgaaccaactgttgttgatgaggttcgcacc
ggaacataccgtcagttgtttcatccggagcagctcatcacyggtaaagaggatgccgcc
aacaacttcgcccgaggccactacacaattggcaaggagatcgtcgacctggtgctggac
cgagttcgcaagctgtcggaccagtgcactgggcttcagggcttcctgatcttccacagc
tttggtggtggaaccggytccggctttgcttctctgctcatggagagactgtcagtggac
tacggcaaaaagtccaaactggagtttgctatttacccttcacctcaggtgtccacagca
gtagtggagccctacaattctatcctgaccacccacaccaccctggaacactcagactgt
gccttcatggtcgacaacgaggccatctacgacatttgcagtcgtaacctggacattgag
cgccccacttatactaacctcaacaggctcattggccagatcgtctcctccatcacagct
tcgctgcgtttcgatggagccctcaacgtggacctgactgagttccagaccaacctggtg
ccatacccccgtatccacttccccctggtcacctacgcacccrtcatytctgctgagaag
gcctaccacgagatgctttctgtggcagagatcaccaacgcttgcttcgagccagccaac
cagatggtgaagtgtgaccctcgccatggcaagtacatggcctgctgcatgctgtatcgt
ggggatgtggtgcccaaggatgtcaatgctgccatcgccaccatcaagaccaaacgcact
atccagtttgtcgactggtgccccaccggcttcaaggtaggtatcaactaccagccaccc
acggtggtgccaggtggagatcttgccaaggtccagagagccgtttgcatgttgagcaac
accacagccatcgctgaggcctgggctcggctcgaccacaagtttgatctgatgtacgcc
aagcgtgcctttgtgcactggtatgtgggagarggtatggaggagggggagttctctgag
gccagagaagatctggctgccctggagaaggactacgaggaagtgggagtggattcagtg
gagggagaggctgaggaaggagaggagtactaa
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